| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is 220930919
Identifier: 220930919
GI number: 220930919
Start: 83509
End: 84039
Strand: Direct
Name: 220930919
Synonym: Hore_00710
Alternate gene names: NA
Gene position: 83509-84039 (Clockwise)
Preceding gene: 220930917
Following gene: 220930920
Centisome position: 3.24
GC content: 34.46
Gene sequence:
>531_bases TTGGATTTCTTCCGGGTTGGGGATAAGGTTATATATAAAAAGAAAATAGAAAGAACAATAACCAAAATTTTGAAGATGAG GGAAAAGGGGTTGTCCCAGTCAAAAGTAGCCGGGGAGATTAACGTTGAAAGGAGTTTTATTTCCCGGCTGGAAAGTATCG GTGAAGTAAGAAAGGGAGAAAAAATAGCCCTGATAGGCTTTCCTATTGCCAATAAACAGGAAATAACTGAAATTGCTAAA AAAAATGGTGTCGAGTTTATTTTGCTTTTAACCGAAGAAGAAAGATGGGATTTTATAAAAAATAAGAGTAGTCTTGAAAT ATTTAATTTGCTTATGGAGATTTTAACCAGACTTAAGGAATTTGATTTATTAATATTCCTGGGTTCCGATATGCGCCTGG ATCTGGTTGACAAACTTATGGATGGTAAAATAGTAGGGATTGAGCTGGGTAATTCTCCCCTGAAAGAAAATATATATGTT GATCCGGACCGGATCGAAGAGATAATTAAAAATTTTTCTATTGATGATTAA
Upstream 100 bases:
>100_bases TATTATATTAAACCTACATATAACATTATTTTCCTTGACAAATATAGTTAAAGTGTTAAAATAATATTGTATACAGTTTT GTGCACAGGAGATGGTTGGA
Downstream 100 bases:
>100_bases ATATACTTTTAATTTTATAAGGGGAAATAATGACTTATACCTGAGTACATAATAATAGTTTTTCACAAAGGAGTTGATAT AATGAAAAAGGTTTTAAGTA
Product: hypothetical protein
Products: NA
Alternate protein names: Transcriptional Regulator
Number of amino acids: Translated: 176; Mature: 176
Protein sequence:
>176_residues MDFFRVGDKVIYKKKIERTITKILKMREKGLSQSKVAGEINVERSFISRLESIGEVRKGEKIALIGFPIANKQEITEIAK KNGVEFILLLTEEERWDFIKNKSSLEIFNLLMEILTRLKEFDLLIFLGSDMRLDLVDKLMDGKIVGIELGNSPLKENIYV DPDRIEEIIKNFSIDD
Sequences:
>Translated_176_residues MDFFRVGDKVIYKKKIERTITKILKMREKGLSQSKVAGEINVERSFISRLESIGEVRKGEKIALIGFPIANKQEITEIAK KNGVEFILLLTEEERWDFIKNKSSLEIFNLLMEILTRLKEFDLLIFLGSDMRLDLVDKLMDGKIVGIELGNSPLKENIYV DPDRIEEIIKNFSIDD >Mature_176_residues MDFFRVGDKVIYKKKIERTITKILKMREKGLSQSKVAGEINVERSFISRLESIGEVRKGEKIALIGFPIANKQEITEIAK KNGVEFILLLTEEERWDFIKNKSSLEIFNLLMEILTRLKEFDLLIFLGSDMRLDLVDKLMDGKIVGIELGNSPLKENIYV DPDRIEEIIKNFSIDD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20367; Mature: 20367
Theoretical pI: Translated: 5.21; Mature: 5.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDFFRVGDKVIYKKKIERTITKILKMREKGLSQSKVAGEINVERSFISRLESIGEVRKGE CCCHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHHHHHCCC KIALIGFPIANKQEITEIAKKNGVEFILLLTEEERWDFIKNKSSLEIFNLLMEILTRLKE EEEEEECCCCCHHHHHHHHHHCCCEEEEEEECCHHHHHHCCCCHHHHHHHHHHHHHHHHH FDLLIFLGSDMRLDLVDKLMDGKIVGIELGNSPLKENIYVDPDRIEEIIKNFSIDD CCEEEEECCCCCHHHHHHHHCCEEEEEEECCCCCCCCCEECHHHHHHHHHHCCCCC >Mature Secondary Structure MDFFRVGDKVIYKKKIERTITKILKMREKGLSQSKVAGEINVERSFISRLESIGEVRKGE CCCHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHHHHHCCC KIALIGFPIANKQEITEIAKKNGVEFILLLTEEERWDFIKNKSSLEIFNLLMEILTRLKE EEEEEECCCCCHHHHHHHHHHCCCEEEEEEECCHHHHHHCCCCHHHHHHHHHHHHHHHHH FDLLIFLGSDMRLDLVDKLMDGKIVGIELGNSPLKENIYVDPDRIEEIIKNFSIDD CCEEEEECCCCCHHHHHHHHCCEEEEEEECCCCCCCCCEECHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA