| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is malE [C]
Identifier: 220930886
GI number: 220930886
Start: 42408
End: 43676
Strand: Direct
Name: malE [C]
Synonym: Hore_00380
Alternate gene names: 220930886
Gene position: 42408-43676 (Clockwise)
Preceding gene: 220930885
Following gene: 220930887
Centisome position: 1.64
GC content: 41.69
Gene sequence:
>1269_bases ATGAGAAATAAATCTTTAATTGTTTTACTGGTAGTAAGCCTGTTACTGGTTTGTTATGGGACAGGATTGGCTAAAACCAC TGTCAGGATTGCTGGCTTTGGGGGGAATGACCAGGTAATTGTTGAGGAGCTCCTTAATAAATTTGTCAGGCCAGAGCTGG CGGATGAAGGTATTGAAATTATTTACGAGCCTATTGCTGATGATTATCAAAGGTACCTTTTGAATTCGCTTTCTGCCGGT ACTGCTGCAGACCTGTTTTATATGGATATTTTCTGGGCTAAAAATGTTATAAAAGAAGGTCTGGTTGAACCGCTTGATAG CTATCTGGCTAAATCTGAAGTTATCAGCAAAGAAGACATTGTGCCCAGCTTACTAGAAGGTTTTACCTATGAAGGCAAAT TGTATGGAATCCCCAAGGATTTCAACTCTCTGGCCCTGTTTTACAATAAGGACCTTTTTGATATAGCAGGAATACCTTAT CCCAATGAGGCCGATACCTGGAAAACCTTAGAATATAAATTAAGGAAAGTGGTTGAGTTTTTTGAAAAAGAAGGAGAAGA AATTCATGGATTGGCATTACAACCTGAGTATGCCAGGATGGGTGCCTTTGCTTATGCTGCTGGATGGGAACCTTTTGTAA ATGGAAAAACAAATCTCCAGGACCCCAAATTTGTCAAAGCATTTAAATGGTATACCGGATTAAAAGAAAAAGGGTTAGGT ATTATGCCGGCTGATATTGGCCAGGGCTGGGGCGGTGGCGCCTTTGCTAATGGTAATTTTGCTGCCTGCCTCGAAGGAGC CTGGATTATTGGATTCCTGCGTGATCAGGCACCAAACCTGAATTATGGTGCTACCTTGCTACCGAAATGCTCAGATACCG ATGAAAGAGGTAACTTTATCTTCACTGTTGCCTGGGGTATAAATGCTAACTCAAAGAATAAAGAAGCCGCTTTCAGGGTT TTAGAAACACTGACAAGTCCTGAAGCCCAGCAATGGGTTCTGGAAAGGGGTCTTGCCATTCCCAGCCGGAAATCACTGGC TGACAATCCGTACTTTGAAAAGCAGACCAAGGAAGCCCAGGCCAATAAAGTTGTCTTCATGGGTGCGTCAAGAGGAAATA TTAAACCCTATAGTTTCAGGGATTATGGTGGAGAATGGATGGAACCAATCAATACTGCTTTAAATGAAGTAATGAGTGGA CAGTCAACAGTAGAAGAAGCATTAAAAACTGCCCAGGAAAGACTTGAACAGGACATAATGAATAAATAA
Upstream 100 bases:
>100_bases TAACTTTAACGTTTAAGTTTATGTTTTAACTTTAACGTTAAAGTAGTTTAAAGTGGTCAAGGTTTTAATAAACTAATTAA AAATTTCAGGGGGGACAAGG
Downstream 100 bases:
>100_bases AAGTAGACCCTGGAGAGGGGGAGCGGGGGATTCCCCACTCCCCTTTTTTATAAATAGGAGGTGACCGTCTTGCAGAAAAA GTGGGCCTACTGGAAAGAGA
Product: family 1 extracellular solute-binding protein
Products: ADP; phosphate; maltose [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 422; Mature: 422
Protein sequence:
>422_residues MRNKSLIVLLVVSLLLVCYGTGLAKTTVRIAGFGGNDQVIVEELLNKFVRPELADEGIEIIYEPIADDYQRYLLNSLSAG TAADLFYMDIFWAKNVIKEGLVEPLDSYLAKSEVISKEDIVPSLLEGFTYEGKLYGIPKDFNSLALFYNKDLFDIAGIPY PNEADTWKTLEYKLRKVVEFFEKEGEEIHGLALQPEYARMGAFAYAAGWEPFVNGKTNLQDPKFVKAFKWYTGLKEKGLG IMPADIGQGWGGGAFANGNFAACLEGAWIIGFLRDQAPNLNYGATLLPKCSDTDERGNFIFTVAWGINANSKNKEAAFRV LETLTSPEAQQWVLERGLAIPSRKSLADNPYFEKQTKEAQANKVVFMGASRGNIKPYSFRDYGGEWMEPINTALNEVMSG QSTVEEALKTAQERLEQDIMNK
Sequences:
>Translated_422_residues MRNKSLIVLLVVSLLLVCYGTGLAKTTVRIAGFGGNDQVIVEELLNKFVRPELADEGIEIIYEPIADDYQRYLLNSLSAG TAADLFYMDIFWAKNVIKEGLVEPLDSYLAKSEVISKEDIVPSLLEGFTYEGKLYGIPKDFNSLALFYNKDLFDIAGIPY PNEADTWKTLEYKLRKVVEFFEKEGEEIHGLALQPEYARMGAFAYAAGWEPFVNGKTNLQDPKFVKAFKWYTGLKEKGLG IMPADIGQGWGGGAFANGNFAACLEGAWIIGFLRDQAPNLNYGATLLPKCSDTDERGNFIFTVAWGINANSKNKEAAFRV LETLTSPEAQQWVLERGLAIPSRKSLADNPYFEKQTKEAQANKVVFMGASRGNIKPYSFRDYGGEWMEPINTALNEVMSG QSTVEEALKTAQERLEQDIMNK >Mature_422_residues MRNKSLIVLLVVSLLLVCYGTGLAKTTVRIAGFGGNDQVIVEELLNKFVRPELADEGIEIIYEPIADDYQRYLLNSLSAG TAADLFYMDIFWAKNVIKEGLVEPLDSYLAKSEVISKEDIVPSLLEGFTYEGKLYGIPKDFNSLALFYNKDLFDIAGIPY PNEADTWKTLEYKLRKVVEFFEKEGEEIHGLALQPEYARMGAFAYAAGWEPFVNGKTNLQDPKFVKAFKWYTGLKEKGLG IMPADIGQGWGGGAFANGNFAACLEGAWIIGFLRDQAPNLNYGATLLPKCSDTDERGNFIFTVAWGINANSKNKEAAFRV LETLTSPEAQQWVLERGLAIPSRKSLADNPYFEKQTKEAQANKVVFMGASRGNIKPYSFRDYGGEWMEPINTALNEVMSG QSTVEEALKTAQERLEQDIMNK
Specific function: Probably part of an ABC transporter complex [H]
COG id: COG1653
COG function: function code G; ABC-type sugar transport system, periplasmic component
Gene ontology:
Cell location: Periplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 1 family [H]
Homologues:
Organism=Escherichia coli, GI1790466, Length=383, Percent_Identity=25.8485639686684, Blast_Score=65, Evalue=8e-12,
Paralogues:
None
Copy number: 660 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 720 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 240 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase,
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006059 - InterPro: IPR006061 [H]
Pfam domain/function: PF01547 SBP_bac_1 [H]
EC number: NA
Molecular weight: Translated: 47092; Mature: 47092
Theoretical pI: Translated: 4.61; Mature: 4.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRNKSLIVLLVVSLLLVCYGTGLAKTTVRIAGFGGNDQVIVEELLNKFVRPELADEGIEI CCCCHHHHHHHHHHHHHHHCCCHHHEEEEEEECCCCCHHHHHHHHHHHHCCHHHCCCHHH IYEPIADDYQRYLLNSLSAGTAADLFYMDIFWAKNVIKEGLVEPLDSYLAKSEVISKEDI HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH VPSLLEGFTYEGKLYGIPKDFNSLALFYNKDLFDIAGIPYPNEADTWKTLEYKLRKVVEF HHHHHHCCCCCCEEEECCCCCCCEEEEECCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHH FEKEGEEIHGLALQPEYARMGAFAYAAGWEPFVNGKTNLQDPKFVKAFKWYTGLKEKGLG HHHCCCEEECEECCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCHHHCCCC IMPADIGQGWGGGAFANGNFAACLEGAWIIGFLRDQAPNLNYGATLLPKCSDTDERGNFI CCCHHCCCCCCCCCCCCCCHHHHHCCCEEEEEHHCCCCCCCCCCEECCCCCCCCCCCCEE FTVAWGINANSKNKEAAFRVLETLTSPEAQQWVLERGLAIPSRKSLADNPYFEKQTKEAQ EEEEEECCCCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHC ANKVVFMGASRGNIKPYSFRDYGGEWMEPINTALNEVMSGQSTVEEALKTAQERLEQDIM CCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHC NK CC >Mature Secondary Structure MRNKSLIVLLVVSLLLVCYGTGLAKTTVRIAGFGGNDQVIVEELLNKFVRPELADEGIEI CCCCHHHHHHHHHHHHHHHCCCHHHEEEEEEECCCCCHHHHHHHHHHHHCCHHHCCCHHH IYEPIADDYQRYLLNSLSAGTAADLFYMDIFWAKNVIKEGLVEPLDSYLAKSEVISKEDI HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH VPSLLEGFTYEGKLYGIPKDFNSLALFYNKDLFDIAGIPYPNEADTWKTLEYKLRKVVEF HHHHHHCCCCCCEEEECCCCCCCEEEEECCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHH FEKEGEEIHGLALQPEYARMGAFAYAAGWEPFVNGKTNLQDPKFVKAFKWYTGLKEKGLG HHHCCCEEECEECCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCHHHCCCC IMPADIGQGWGGGAFANGNFAACLEGAWIIGFLRDQAPNLNYGATLLPKCSDTDERGNFI CCCHHCCCCCCCCCCCCCCHHHHHCCCEEEEEHHCCCCCCCCCCEECCCCCCCCCCCCEE FTVAWGINANSKNKEAAFRVLETLTSPEAQQWVLERGLAIPSRKSLADNPYFEKQTKEAQ EEEEEECCCCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHC ANKVVFMGASRGNIKPYSFRDYGGEWMEPINTALNEVMSGQSTVEEALKTAQERLEQDIM CCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHC NK CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; maltose [Periplasm]; H2O [C]
Specific reaction: ATP + maltose [Periplasm] + H2O = ADP + phosphate + maltose [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA