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The map label for this gene is 220930853

Identifier: 220930853

GI number: 220930853

Start: 3451

End: 3669

Strand: Direct

Name: 220930853

Synonym: Hore_00030

Alternate gene names: NA

Gene position: 3451-3669 (Clockwise)

Preceding gene: 220930852

Following gene: 220930854

Centisome position: 0.13

GC content: 39.27

Gene sequence:

>219_bases
ATGAAAGATATAAAGATTAATACTGAAAAAATAAAACTGGATCAATTACTTAAATATGCCAATATTGTGGCCACTGGAGG
ACAGGCCAAAAATCTGATTCAGGCAGGAAAAGTTATGGTTAACGGTGAAGAAGAGTTAAGGAGAGGGCGGAAGCTGGTAC
CCGGAGATGAAGTACAACTGGTAGGTGAAAATACTGTATACCGGGTGACCAGAGATTAA

Upstream 100 bases:

>100_bases
ACTTATTGGACCTTTAAATCCTTTAACTTTAAAGAAAGAAAATAGTGATGATTTTATTTACCTGGTAATGCCCGTCCGCC
GGTAAACGGGAGGTTATAAA

Downstream 100 bases:

>100_bases
ATGTATATTGATCGTATTTATTTGAAGGATTTTCGTAACCTGACAGAGAATTTAATAAAGTTGGATAATAGATTAAATGT
CTTTGTTGGTTTAAATGGTC

Product: RNA-binding S4 domain-containing protein

Products: NA

Alternate protein names: S4 Domain Protein YaaA; S4 Domain-Containing Protein YaaA

Number of amino acids: Translated: 72; Mature: 72

Protein sequence:

>72_residues
MKDIKINTEKIKLDQLLKYANIVATGGQAKNLIQAGKVMVNGEEELRRGRKLVPGDEVQLVGENTVYRVTRD

Sequences:

>Translated_72_residues
MKDIKINTEKIKLDQLLKYANIVATGGQAKNLIQAGKVMVNGEEELRRGRKLVPGDEVQLVGENTVYRVTRD
>Mature_72_residues
MKDIKINTEKIKLDQLLKYANIVATGGQAKNLIQAGKVMVNGEEELRRGRKLVPGDEVQLVGENTVYRVTRD

Specific function: Unknown

COG id: COG2501

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8068; Mature: 8068

Theoretical pI: Translated: 10.01; Mature: 10.01

Prosite motif: PS50889 S4

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDIKINTEKIKLDQLLKYANIVATGGQAKNLIQAGKVMVNGEEELRRGRKLVPGDEVQL
CCCCCCCHHEECHHHHHHHHHHEECCCCHHHHHHCCEEEECCHHHHHCCCCCCCCCCEEE
VGENTVYRVTRD
ECCCEEEEEECC
>Mature Secondary Structure
MKDIKINTEKIKLDQLLKYANIVATGGQAKNLIQAGKVMVNGEEELRRGRKLVPGDEVQL
CCCCCCCHHEECHHHHHHHHHHEECCCCHHHHHHCCEEEECCHHHHHCCCCCCCCCCEEE
VGENTVYRVTRD
ECCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA