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Identifier: 220930453

GI number:

Start: 3624126

End: 3627650

Strand: Reverse

Name: Not Available

Synonym: Ccel_3090

Alternate gene names: NA

Gene position: NA

Preceding gene: 220930454

Following gene: 220930452

Centisome position: NA

GC content: NA

Gene sequence:

>3525_bases
ATGAACTTTTTTACAGATCCTCTCTTAAAAATAGATGAATATAATACACTTTTATCAAACGTCAGGGAGGAACGGGGCCC
CGTATCGGTTATAGGGCCGTCAGATTCACAGAAGGTGCACCTGATATATTCTTTGTGTACTCATTTACAAAAAAGAGGAC
TGTATATAACATACAATGAAATGCAGGCCAGGAGGGTTTACGACGATTTTTCGTTTTTCCTTGGGGATGATGTTTTGTAT
TACCCTCCAAAAGAGACTATGCTCTATAATGTAGAAGCCAGAAGCAACGATATAATATACCAAAGGACTAAAACCCTTTT
GAACTGTTTAGAGGGAAACTATAAGATGGTTGTAATGTCAGCTGAAGCGCTTATACAGATGATTTCACCAGTTGAACTCT
TTAGAGAAGGGATAATGGACTTCTATGTCGGTTCACAGGTGAATCTTGATGAGCTTGTCTCAAAGCTTGTTTTGTATGGC
TATGAAAGAGTTGAAAGTGTGGAAGGTAAAGCTCAGTTTGCTGTTCGAGGTGGAATAATAGATGTTTTTGCAGTAAACAG
TGAACATCCTGTTCGTATTGAATTATTTGATACTGACGTGGATTCTATTAGGCACTTTGATGAAACAACACAGAGATCTA
CAAATTCAATTGATGAGTGCAGAATTGCTCCCGCAAGGGACGTAGTTTACAAGGAAGTTTCAAGGGAAGGAATAATTTCA
AAGATAAAAAAGGATCTGGCTGACTACATTAAAAAGTTAAAGCAGAAGGAGAACAGAGAAGGTGTTAAAAATATATCAAA
ACGGGTTGAGGAGGATATTGACAGTTTAATTGAACACCATTATTTTCCGGGGATTGACAGATACTATCCGTATATTTTAG
AAAGTCCAGCTTCTGTAATAGACTATATTGAGAGTGAATCAATCATTATCATGGATGAAACCTTAAGAATAAGCCAGAGG
ATTGAGAACGTCGAGCTTGAACATGAAGAACTTGCCAAGAGTCTGTTAGAGAAAGGCGGTATTCTGCCTAAAGGAGCACA
ATGGACCTTTTCCACAGACTCAATAGTCGATCGCATTTTGAATTTCAGGACTATAACATTGTCTGCTATTTCATCCAACA
ACTCACTAATCAGACCTTATAACCAGATATCAATACCCTGTAAGTCAGGGAACTCTTACCAGAACCATATAGACTTACTT
GTTGACGACATAGGACAACTTCGGAAAAGAGAATATAAAATAATTGTTCTTTCAGGCCCCAGCGGGAGGGGACACAGACT
GGTTGAAACCCTTGCAACTAATGAAATAATGTCCAGTTACAAAGAGCATCCTGAGTACAGGATACAGAACGGAGAGGTTG
TGGTAACTCACGGCAGCCTGCAGAAAGGGTTTGAATACCCGACCGCGGCATTTGTTGTAATAAGTGACATTGAGGTTTTC
GGTCAGGCTAAACGAATAAAAAAGGCAAAGGCAAAGAGGGCTGGCAATAAAATAAAAGCATTTTCCGACCTCAATATTGG
TGACTTTGTTGTACATCAGGCTCACGGTATAGGCCAATATATCGGTATTGAAAATCTCAGCGTGGGTGAAGTTAAGAGGG
ATTATCTCAAAATCCGTTATCAGGAAGGAGACTTCCTTTACATTCCAACTAACCAGCTGGATTTACTCCAAAAATACATC
GGGTCCGAAGGGAAAACACCGAGGGTTAATAAGCTTGGAGGTACTGAATGGGCCAAGACAAAGAGTCGTGTAAAGGAATC
TCTGCAGCAACTTGCGGCGGAGCTCATAAAGCTTTATGCACAGAGACAGTCTGCAAAGGGACATTCTTTCAGCGAGGACA
CCGTTTGGCAAAGGCAGTTTGAGGAACTGTTTCCATATCAGGAAACCGACGATCAACTTAAATGTATAGATGAAATAAAA
AAGGATATGGAGTCAGAAGGGCTCATGGACAGGCTGCTTTGCGGAGATGTGGGCTACGGCAAAACCGAAGTTGCAATAAG
GGCTGTATTCAAGGCCGTGATGGATGGGAAGCAGGTGGCTTACCTTGCACCTACAACTATCCTTGCCCAGCAGCTGTATG
AAAACTTTAAGACAAGGATGAATGATTTCCCAGTAACTGTTGATGTCATGAGCAGATTCAGGACACCGGCAGAGCAGAAG
AAAATTGTAAAATCTGTTAAGGCCGGGAACACAGATATACTCATAGGCACACACAGGCTTCTGCAAAAGGATGTTGAATT
TAAGGACCTTGGACTTCTTGTGATTGATGAGGAACAGCGTTTTGGTGTAACCCACAAGGAAAAATTGAAAACGTTAAAGC
CAAATGTTGATGTCTTGACTCTGACAGCTACACCTATCCCCAGAACCCTGCATATGTCACTGGTCGGAATAAGGGATATA
AGTGTACTGGAGGATCCTCCGGAAGAAAGGTACCCTGTTCAGACCTACGTTATGGAATACAACATGGAGCTTATACGTGA
TGGTATAATCCGTGAAATGGCAAGAGATGGTCAGGTTTTCTATATGTACAACAGGGTAAGAGGCATTGACCTGAAGGCAC
AGGAAATCAGGAAAATGATACCTGATGCAAGAGTTGCGGTTGCTCATGGTAAAATGAATGAAAAAGAGCTTGAAGATGTA
ATGTACGGCTTTATCAACGGGGAGTATGATGTGCTTGTATGTACTACTATTATTGAGTCAGGACTTGATATGCCAAACGT
TAATACTATTGTTGTAGAAGATGCCGACAGAATGGGCCTATCTCAACTTTACCAGATAAGAGGAAGGGTTGGAAGATCCA
ACAGGCTTGCATATGCCTATATCACATATAAAAAGGACAAGGTTCTTTCAGAGGTGGCAGAAAAAAGACTTCAGGCTATA
AAGGAATTTACTGAATTCGGTTCAGGATTCAGAATAGCAATGCGGGACCTTGAGATAAGAGGGGCAGGAAACCTGCTTGG
ATCTGAGCAGCACGGACATTTGGAAACCGTAGGTTACGAAATGTACTGCAAACTACTGGACGAGGCTGTGCAGGAGTTGA
GCGGCAAGGAAGTACGCACAACAGATGAAGAAATGGCAGTTGACCTGAACGTTAATGCTTATATAGATAATGAATATATA
AGTTCAGAAGAGCAAAAAATTGATATGTACAAAAAAATTGCCGCAATACAAAATGAAAATGACGTCATTGATTTGAAAGA
TGAGTTAATAGACAGGTACGGAGATATACCCGAAGAAGTGGAAAATCTTATGGACATTGCATACATTAAGGCACTTGCTG
TAGAGTGCGGCTTTATCGGTATTGTCCAGAAGGACGATACAATATTGTTTCAGTTGCGGAAGTCCGCTTCAACAGTATCC
AAGTATCTGGGAGTGCTTATGGATAAGTACCCTAGAAGGATTATGCTTAATGCCAGCAGCAACCCTTATTTGTCATTTAA
ATTGATATATTCCTCGGGAAGAGAAAATTTGGCAAATATTAAGATTTTGTTACAATACATTATTAAATTGCAGTATAATG
AATAA

Upstream 100 bases:

>100_bases
GTATTGTAAAAGCTGCACAGGCGGCAATAATGATAGCACAAAGCGGGACGGAAAAGGCAATGAACAGCTATAATAAATAA
GAACAGCCGGAGGTTACGGA

Downstream 100 bases:

>100_bases
TTGAATATAATTATAATCAACAAGTAATTTGTAAAATTCAGGTTACAAATTAGATTTTGAATAAAAATATGGGGAGAGAT
AACCTTTGGAAAACGAAAAT

Product: transcription-repair coupling factor

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1174_residues
MNFFTDPLLKIDEYNTLLSNVREERGPVSVIGPSDSQKVHLIYSLCTHLQKRGLYITYNEMQARRVYDDFSFFLGDDVLY
YPPKETMLYNVEARSNDIIYQRTKTLLNCLEGNYKMVVMSAEALIQMISPVELFREGIMDFYVGSQVNLDELVSKLVLYG
YERVESVEGKAQFAVRGGIIDVFAVNSEHPVRIELFDTDVDSIRHFDETTQRSTNSIDECRIAPARDVVYKEVSREGIIS
KIKKDLADYIKKLKQKENREGVKNISKRVEEDIDSLIEHHYFPGIDRYYPYILESPASVIDYIESESIIIMDETLRISQR
IENVELEHEELAKSLLEKGGILPKGAQWTFSTDSIVDRILNFRTITLSAISSNNSLIRPYNQISIPCKSGNSYQNHIDLL
VDDIGQLRKREYKIIVLSGPSGRGHRLVETLATNEIMSSYKEHPEYRIQNGEVVVTHGSLQKGFEYPTAAFVVISDIEVF
GQAKRIKKAKAKRAGNKIKAFSDLNIGDFVVHQAHGIGQYIGIENLSVGEVKRDYLKIRYQEGDFLYIPTNQLDLLQKYI
GSEGKTPRVNKLGGTEWAKTKSRVKESLQQLAAELIKLYAQRQSAKGHSFSEDTVWQRQFEELFPYQETDDQLKCIDEIK
KDMESEGLMDRLLCGDVGYGKTEVAIRAVFKAVMDGKQVAYLAPTTILAQQLYENFKTRMNDFPVTVDVMSRFRTPAEQK
KIVKSVKAGNTDILIGTHRLLQKDVEFKDLGLLVIDEEQRFGVTHKEKLKTLKPNVDVLTLTATPIPRTLHMSLVGIRDI
SVLEDPPEERYPVQTYVMEYNMELIRDGIIREMARDGQVFYMYNRVRGIDLKAQEIRKMIPDARVAVAHGKMNEKELEDV
MYGFINGEYDVLVCTTIIESGLDMPNVNTIVVEDADRMGLSQLYQIRGRVGRSNRLAYAYITYKKDKVLSEVAEKRLQAI
KEFTEFGSGFRIAMRDLEIRGAGNLLGSEQHGHLETVGYEMYCKLLDEAVQELSGKEVRTTDEEMAVDLNVNAYIDNEYI
SSEEQKIDMYKKIAAIQNENDVIDLKDELIDRYGDIPEEVENLMDIAYIKALAVECGFIGIVQKDDTILFQLRKSASTVS
KYLGVLMDKYPRRIMLNASSNPYLSFKLIYSSGRENLANIKILLQYIIKLQYNE

Sequences:
NA

Specific function: NA

COG id: COG1197

COG function: function code LK; Transcription-repair coupling factor (superfamily II helicase)

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA