| Definition | Mycobacterium leprae Br4923 chromosome, complete genome. |
|---|---|
| Accession | NC_011896 |
| Length | 3,268,071 |
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The map label for this gene is yrbE1B [C]
Identifier: 221230869
GI number: 221230869
Start: 3091441
End: 3092310
Strand: Direct
Name: yrbE1B [C]
Synonym: MLBr_02588
Alternate gene names: 221230869
Gene position: 3091441-3092310 (Clockwise)
Preceding gene: 221230868
Following gene: 221230870
Centisome position: 94.6
GC content: 59.66
Gene sequence:
>870_bases ATGTCGACCGCTGCCGTGTTGCGCGCCCGTTTTCCGCGGGCTGCCGCCAATCTGAATCGTTATGGCGGAGCCGCGGCCCG CGGAATTGACGACATCGGCCAAATGAGCTGGTTTGGCCTGATCGCCCTCGGAAACATCCCTAATGCCCTGAGCCGCTATC GCAAGGAAACGCTGCGCCTGATAGCCCAGATCGGGATGGGTACTGGTGCAATGGCTGTCGTTGGTGGCACCGCCGCGATC GTCGGGTTCGTCACGCTCTCCGGTAGCTCTCTGGTCGCTATCCAGGGTTTCGCGTCGCTGGGGGCCATCGGTGTCGAGGC GTTTACCGGCTTCTTCGCTGCACTGATCAACGTGCGCATCGCTGCCCCCGTGATCACAGGTATCGTCATGGCGGCCACCG TCGGCGCCGGCGCCACCGCCGAACTAGGGGCGATGCGTATCAGCGAAGAGATTGATGCCCTGGAAGTGATGAGCATCAAG TCGATCTCGTTTCTGGTGACTACTCGGATTTTGGCCGGGCTGGTCGTGATCGTTCCACTTTACGCGGTGGCGATGATCAT GGCGTTTCTGTCTCCACATATCATCACGACGGTGCTCTACGGGCAGTCGAATGGCACGTATGAGCACTACTTCCGAACAT TCCTGCGCCCCGATGACGTTTTCTGGTCGTTCTTGGAGGCCGTGATCATCACGGCGGTTGTGATGATCACGCATTGCTAC TACGGGTATACCGCCAACGGCGGACCTGTCGGCGTCGGTGAGGCCGTCGGGCGGTCGATGCGTTTCTCTTTGGTGTCAGT GCAGGTTGTAGTTTTATCCGCCACGTTGGCGCTCTACGGCGTAGATCCCAACTTCGCTTTGACGGTATAG
Upstream 100 bases:
>100_bases CGCCGTCAACGAAACCGTGGTGCTTTGCGTGGTCGCGTTGTACGCGGTCAATGTGGTGCTGACCACCATCGGCGTGCGCT TCGGAACTGGACACTGAAAC
Downstream 100 bases:
>100_bases CCGATGACATCATCAACAAAGATCAACGCGTCACGAAAGCCGCCGTACAAGTTGGCCGGGGTTGGCTTGTTGGTCGTGGC TGTAGTGATTTTCGGCTTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 289; Mature: 288
Protein sequence:
>289_residues MSTAAVLRARFPRAAANLNRYGGAAARGIDDIGQMSWFGLIALGNIPNALSRYRKETLRLIAQIGMGTGAMAVVGGTAAI VGFVTLSGSSLVAIQGFASLGAIGVEAFTGFFAALINVRIAAPVITGIVMAATVGAGATAELGAMRISEEIDALEVMSIK SISFLVTTRILAGLVVIVPLYAVAMIMAFLSPHIITTVLYGQSNGTYEHYFRTFLRPDDVFWSFLEAVIITAVVMITHCY YGYTANGGPVGVGEAVGRSMRFSLVSVQVVVLSATLALYGVDPNFALTV
Sequences:
>Translated_289_residues MSTAAVLRARFPRAAANLNRYGGAAARGIDDIGQMSWFGLIALGNIPNALSRYRKETLRLIAQIGMGTGAMAVVGGTAAI VGFVTLSGSSLVAIQGFASLGAIGVEAFTGFFAALINVRIAAPVITGIVMAATVGAGATAELGAMRISEEIDALEVMSIK SISFLVTTRILAGLVVIVPLYAVAMIMAFLSPHIITTVLYGQSNGTYEHYFRTFLRPDDVFWSFLEAVIITAVVMITHCY YGYTANGGPVGVGEAVGRSMRFSLVSVQVVVLSATLALYGVDPNFALTV >Mature_288_residues STAAVLRARFPRAAANLNRYGGAAARGIDDIGQMSWFGLIALGNIPNALSRYRKETLRLIAQIGMGTGAMAVVGGTAAIV GFVTLSGSSLVAIQGFASLGAIGVEAFTGFFAALINVRIAAPVITGIVMAATVGAGATAELGAMRISEEIDALEVMSIKS ISFLVTTRILAGLVVIVPLYAVAMIMAFLSPHIITTVLYGQSNGTYEHYFRTFLRPDDVFWSFLEAVIITAVVMITHCYY GYTANGGPVGVGEAVGRSMRFSLVSVQVVVLSATLALYGVDPNFALTV
Specific function: Could be part of an ABC transporter complex [H]
COG id: COG0767
COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mlaE permease family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003453 [H]
Pfam domain/function: PF02405 DUF140 [H]
EC number: NA
Molecular weight: Translated: 30257; Mature: 30126
Theoretical pI: Translated: 8.90; Mature: 8.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTAAVLRARFPRAAANLNRYGGAAARGIDDIGQMSWFGLIALGNIPNALSRYRKETLRL CCHHHHHHHHCCHHHHHHHHCCCHHHCCHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHH IAQIGMGTGAMAVVGGTAAIVGFVTLSGSSLVAIQGFASLGAIGVEAFTGFFAALINVRI HHHHCCCCCHHHHHCHHHHHHHHEEECCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHH AAPVITGIVMAATVGAGATAELGAMRISEEIDALEVMSIKSISFLVTTRILAGLVVIVPL HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YAVAMIMAFLSPHIITTVLYGQSNGTYEHYFRTFLRPDDVFWSFLEAVIITAVVMITHCY HHHHHHHHHHCHHHHHHEEECCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH YGYTANGGPVGVGEAVGRSMRFSLVSVQVVVLSATLALYGVDPNFALTV CCCCCCCCCCCCHHHHCHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEC >Mature Secondary Structure STAAVLRARFPRAAANLNRYGGAAARGIDDIGQMSWFGLIALGNIPNALSRYRKETLRL CHHHHHHHHCCHHHHHHHHCCCHHHCCHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHH IAQIGMGTGAMAVVGGTAAIVGFVTLSGSSLVAIQGFASLGAIGVEAFTGFFAALINVRI HHHHCCCCCHHHHHCHHHHHHHHEEECCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHH AAPVITGIVMAATVGAGATAELGAMRISEEIDALEVMSIKSISFLVTTRILAGLVVIVPL HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YAVAMIMAFLSPHIITTVLYGQSNGTYEHYFRTFLRPDDVFWSFLEAVIITAVVMITHCY HHHHHHHHHHCHHHHHHEEECCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH YGYTANGGPVGVGEAVGRSMRFSLVSVQVVVLSATLALYGVDPNFALTV CCCCCCCCCCCCHHHHCHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]