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The map label for this gene is ybgJ [H]

Identifier: 221230847

GI number: 221230847

Start: 3037405

End: 3038073

Strand: Direct

Name: ybgJ [H]

Synonym: MLBr_02549

Alternate gene names: 221230847

Gene position: 3037405-3038073 (Clockwise)

Preceding gene: 221230831

Following gene: 221230848

Centisome position: 92.94

GC content: 62.18

Gene sequence:

>669_bases
ATGGAAACAACAAGCAACCATACGCAAGAGCTATCTAAAAACTTGGTAAGGAACGATACCATTCTCAATTACGGCGATCA
AGCGCTGATGCTGCAATGCGGCAGCACCTCTGATGTCCTGGCATGGGCAGATGCGTTACGTGCGGCGGCACTACCCGGTG
TGGTCGACATCGTCCCAGGCGCCCGCACCGTGTTGGTGAAACTCGGCGGACCCCGCGACCAAAAGGTCACCCTTCAGCGG
CTACGCAAGCTGCGGGTCACCCCGGAGGCGACTGCGCCAGCTGACCGCGGCGCCGACGTGGTGATCGACGTCGTCTACGA
CGGCCCGGACCTCGCCGAGGTTGCCCGCACTACCGGACTGACGGTAGCGAAGGTCATCACCGCCCATACCGGCACTCCGT
GGCGGGTTGGATTCAATGGCTTCGCACCAGGTTTCGCATATCTGGTCGACGGCGATCCACGACTGCGAGTGCCACGCCGG
TGCGATCCGCGGACCTCGGTGCCGCCTGGTTCGGTCGCCCTCGCCGACGAATTCAGCGCGATATATCCGCGCCAATCTCC
TGGCGGTTGGCAACTCATCGGCCACACCAACACAGTGCTGTGGGACACCAACCGGCCCAATCCCGCATTGCTGACACAGG
GCATGTGGGTGCAGTTCCGTGCCACGTAA

Upstream 100 bases:

>100_bases
AATTACCTGTCTTTGAGCTTTTACTAAGGCACCTCTGGCAATGCTCCAAAATCCCTCCCCACTACCCTTATTCCGGCGTT
ACCTTCAAAGAATGAGCGTT

Downstream 100 bases:

>100_bases
AAGAATCGTAGAGAGCCCACCATGACAAACCCGCCAATCAAGTTGGAGATCCTGCGTAGTGGCCCGTTTGCAGTCGTGCA
GGACCTCGGTCGGGCCGGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 222; Mature: 222

Protein sequence:

>222_residues
METTSNHTQELSKNLVRNDTILNYGDQALMLQCGSTSDVLAWADALRAAALPGVVDIVPGARTVLVKLGGPRDQKVTLQR
LRKLRVTPEATAPADRGADVVIDVVYDGPDLAEVARTTGLTVAKVITAHTGTPWRVGFNGFAPGFAYLVDGDPRLRVPRR
CDPRTSVPPGSVALADEFSAIYPRQSPGGWQLIGHTNTVLWDTNRPNPALLTQGMWVQFRAT

Sequences:

>Translated_222_residues
METTSNHTQELSKNLVRNDTILNYGDQALMLQCGSTSDVLAWADALRAAALPGVVDIVPGARTVLVKLGGPRDQKVTLQR
LRKLRVTPEATAPADRGADVVIDVVYDGPDLAEVARTTGLTVAKVITAHTGTPWRVGFNGFAPGFAYLVDGDPRLRVPRR
CDPRTSVPPGSVALADEFSAIYPRQSPGGWQLIGHTNTVLWDTNRPNPALLTQGMWVQFRAT
>Mature_222_residues
METTSNHTQELSKNLVRNDTILNYGDQALMLQCGSTSDVLAWADALRAAALPGVVDIVPGARTVLVKLGGPRDQKVTLQR
LRKLRVTPEATAPADRGADVVIDVVYDGPDLAEVARTTGLTVAKVITAHTGTPWRVGFNGFAPGFAYLVDGDPRLRVPRR
CDPRTSVPPGSVALADEFSAIYPRQSPGGWQLIGHTNTVLWDTNRPNPALLTQGMWVQFRAT

Specific function: Unknown

COG id: COG2049

COG function: function code E; Allophanate hydrolase subunit 1

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis ycsJ and yeast urea amidolyase (DUR1,2) [H]

Homologues:

Organism=Escherichia coli, GI1786929, Length=182, Percent_Identity=40.1098901098901, Blast_Score=119, Evalue=1e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003833
- InterPro:   IPR020899
- InterPro:   IPR010016
- InterPro:   IPR002130 [H]

Pfam domain/function: PF02682 AHS1 [H]

EC number: NA

Molecular weight: Translated: 23993; Mature: 23993

Theoretical pI: Translated: 8.72; Mature: 8.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METTSNHTQELSKNLVRNDTILNYGDQALMLQCGSTSDVLAWADALRAAALPGVVDIVPG
CCCCCHHHHHHHHHHHHCCCEEECCCCEEEEEECCCCCHHHHHHHHHHHHCCCEEEECCC
ARTVLVKLGGPRDQKVTLQRLRKLRVTPEATAPADRGADVVIDVVYDGPDLAEVARTTGL
CEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHCCC
TVAKVITAHTGTPWRVGFNGFAPGFAYLVDGDPRLRVPRRCDPRTSVPPGSVALADEFSA
EEEHEEECCCCCCEEECCCCCCCCEEEEECCCCCEECCCCCCCCCCCCCCCEEECCCHHH
IYPRQSPGGWQLIGHTNTVLWDTNRPNPALLTQGMWVQFRAT
HCCCCCCCCEEEEECCCEEEEECCCCCHHEEECCEEEEEEEC
>Mature Secondary Structure
METTSNHTQELSKNLVRNDTILNYGDQALMLQCGSTSDVLAWADALRAAALPGVVDIVPG
CCCCCHHHHHHHHHHHHCCCEEECCCCEEEEEECCCCCHHHHHHHHHHHHCCCEEEECCC
ARTVLVKLGGPRDQKVTLQRLRKLRVTPEATAPADRGADVVIDVVYDGPDLAEVARTTGL
CEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHCCC
TVAKVITAHTGTPWRVGFNGFAPGFAYLVDGDPRLRVPRRCDPRTSVPPGSVALADEFSA
EEEHEEECCCCCCEEECCCCCCCCEEEEECCCCCEECCCCCCCCCCCCCCCEEECCCHHH
IYPRQSPGGWQLIGHTNTVLWDTNRPNPALLTQGMWVQFRAT
HCCCCCCCCEEEEECCCEEEEECCCCCHHEEECCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]