| Definition | Mycobacterium leprae Br4923 chromosome, complete genome. |
|---|---|
| Accession | NC_011896 |
| Length | 3,268,071 |
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The map label for this gene is 221230782
Identifier: 221230782
GI number: 221230782
Start: 2899897
End: 2900799
Strand: Direct
Name: 221230782
Synonym: MLBr_02424
Alternate gene names: NA
Gene position: 2899897-2900799 (Clockwise)
Preceding gene: 221230770
Following gene: 221230783
Centisome position: 88.73
GC content: 61.79
Gene sequence:
>903_bases ATGGCTTCCCCTGACCTGAGTAACGCATATAACGGTCGCATTGACCTGGGTTCCCTGGCCAACAACGCGAGCATCAACCG GGCGCTTAACGATATGCCCACAGCAGTGGACGACGCAGGGGTCCGCCCGCAACCACCGATCGACCTGACCGCAGCAGCAT TTTTTGACGTCGACAACACGCTGGTGCAGGGCTCGTCGGCGGTGCACTTCGGTCGCGGGCTGGCCGCTCGCGACTATTTC ACCTATCGCGATGTACTCGGATTCATCTACGCCCAGGCTAAATTTCAATTACTCGGAAAAGAAAATAGCCAGGACGTGGC AGCCGGCCAGCGCAAAGCGCTCGCGTTCATCGAAGGACGATCAGTCGAGCAGCTGGTAGCTCTGGGCGAGGAGATCTACG ATGAGATCATCGCTGATAAAATCTGGGCTGGCACCCGCCAGCTCACCCAGATACACCTTGATGCCGGCCAGCAGGTGTGG CTGATCACTGCCACGCCATACGAACTCGCTGCCACCATCGCACGTCGGCTCGGCCTGACCGGGGCATTGGGAACAGTCGC CGAGTCGGTAGACGGGATATTCACTGGCAGACTGGTAGATGAGCTCCTGCATGGAGTCGGGAAAGCACATGCAGTCCGAT CGCTGGCGATCCGGGAGGGCCTCAATCTGAAGCGCTGCACCGCCTATTCCGACAGCTACAACGACGTGCCCATGCTGTCG TTGGTGGGCACCGCGGTCGCCATCAACCCGGACGCCCAGCTACGCAGTCTGGCCCGTGAACGGGGCTGGGAGATCCGCGA CTTTCGAACCGCTCGCAAGGCTGCCCGGATCGGGGTGCCGTCGGCCTTGGCGTTGGGCGGCGCGTTGGCAGCGGCCGTGT CGCGTCGCCGCGACCGCGAATAA
Upstream 100 bases:
>100_bases ACTAGATACGTAAACCTCCGCAACCCAATTTCCCAGATAGGGTTGATGTCGGCCACTGAACCGACCACCGGGCAAGCGCA GCGATTTAGGAGGTTTCGCG
Downstream 100 bases:
>100_bases CCCGCGAGAAGCACAACGACCTCACCGAACCCAAGCATCGCAACGCCAATCATGCTGATAAACTGCGGCGTTAAGCCCAG AGTTGAGCGGAGAGCGCAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 300; Mature: 299
Protein sequence:
>300_residues MASPDLSNAYNGRIDLGSLANNASINRALNDMPTAVDDAGVRPQPPIDLTAAAFFDVDNTLVQGSSAVHFGRGLAARDYF TYRDVLGFIYAQAKFQLLGKENSQDVAAGQRKALAFIEGRSVEQLVALGEEIYDEIIADKIWAGTRQLTQIHLDAGQQVW LITATPYELAATIARRLGLTGALGTVAESVDGIFTGRLVDELLHGVGKAHAVRSLAIREGLNLKRCTAYSDSYNDVPMLS LVGTAVAINPDAQLRSLARERGWEIRDFRTARKAARIGVPSALALGGALAAAVSRRRDRE
Sequences:
>Translated_300_residues MASPDLSNAYNGRIDLGSLANNASINRALNDMPTAVDDAGVRPQPPIDLTAAAFFDVDNTLVQGSSAVHFGRGLAARDYF TYRDVLGFIYAQAKFQLLGKENSQDVAAGQRKALAFIEGRSVEQLVALGEEIYDEIIADKIWAGTRQLTQIHLDAGQQVW LITATPYELAATIARRLGLTGALGTVAESVDGIFTGRLVDELLHGVGKAHAVRSLAIREGLNLKRCTAYSDSYNDVPMLS LVGTAVAINPDAQLRSLARERGWEIRDFRTARKAARIGVPSALALGGALAAAVSRRRDRE >Mature_299_residues ASPDLSNAYNGRIDLGSLANNASINRALNDMPTAVDDAGVRPQPPIDLTAAAFFDVDNTLVQGSSAVHFGRGLAARDYFT YRDVLGFIYAQAKFQLLGKENSQDVAAGQRKALAFIEGRSVEQLVALGEEIYDEIIADKIWAGTRQLTQIHLDAGQQVWL ITATPYELAATIARRLGLTGALGTVAESVDGIFTGRLVDELLHGVGKAHAVRSLAIREGLNLKRCTAYSDSYNDVPMLSL VGTAVAINPDAQLRSLARERGWEIRDFRTARKAARIGVPSALALGGALAAAVSRRRDRE
Specific function: Unknown
COG id: COG0560
COG function: function code E; Phosphoserine phosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the serB family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y2424_MYCLE (Q49823)
Other databases:
- EMBL: U00018 - EMBL: AL583925 - PIR: S72914 - RefSeq: NP_302568.1 - ProteinModelPortal: Q49823 - SMR: Q49823 - EnsemblBacteria: EBMYCT00000028145 - GeneID: 908575 - GenomeReviews: AL450380_GR - KEGG: mle:ML2424 - NMPDR: fig|272631.1.peg.1440 - Leproma: ML2424 - GeneTree: EBGT00050000014979 - HOGENOM: HBG696257 - OMA: YSDSFND - ProtClustDB: CLSK2460617 - BioCyc: MLEP272631:ML2424-MONOMER - InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006383 - InterPro: IPR006385 - Gene3D: G3DSA:3.40.50.1000 - TIGRFAMs: TIGR01488 - TIGRFAMs: TIGR01490
Pfam domain/function: PF00702 Hydrolase; SSF56784 SSF56784
EC number: NA
Molecular weight: Translated: 32276; Mature: 32145
Theoretical pI: Translated: 6.96; Mature: 6.96
Prosite motif: NA
Important sites: ACT_SITE 56-56 ACT_SITE 58-58
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASPDLSNAYNGRIDLGSLANNASINRALNDMPTAVDDAGVRPQPPIDLTAAAFFDVDNT CCCCCCCCCCCCCEEECCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHCCCCHH LVQGSSAVHFGRGLAARDYFTYRDVLGFIYAQAKFQLLGKENSQDVAAGQRKALAFIEGR HHCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHCHHHHEEEECCC SVEQLVALGEEIYDEIIADKIWAGTRQLTQIHLDAGQQVWLITATPYELAATIARRLGLT CHHHHHHHHHHHHHHHHHHHHHCCCHHHHEEEECCCCEEEEEEECHHHHHHHHHHHHCCC GALGTVAESVDGIFTGRLVDELLHGVGKAHAVRSLAIREGLNLKRCTAYSDSYNDVPMLS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEECCCCCCCCCHHHH LVGTAVAINPDAQLRSLARERGWEIRDFRTARKAARIGVPSALALGGALAAAVSRRRDRE HHCCCEEECCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure ASPDLSNAYNGRIDLGSLANNASINRALNDMPTAVDDAGVRPQPPIDLTAAAFFDVDNT CCCCCCCCCCCCEEECCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHCCCCHH LVQGSSAVHFGRGLAARDYFTYRDVLGFIYAQAKFQLLGKENSQDVAAGQRKALAFIEGR HHCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHCHHHHEEEECCC SVEQLVALGEEIYDEIIADKIWAGTRQLTQIHLDAGQQVWLITATPYELAATIARRLGLT CHHHHHHHHHHHHHHHHHHHHHCCCHHHHEEEECCCCEEEEEEECHHHHHHHHHHHHCCC GALGTVAESVDGIFTGRLVDELLHGVGKAHAVRSLAIREGLNLKRCTAYSDSYNDVPMLS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEECCCCCCCCCHHHH LVGTAVAINPDAQLRSLARERGWEIRDFRTARKAARIGVPSALALGGALAAAVSRRRDRE HHCCCEEECCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11234002