| Definition | Mycobacterium leprae Br4923 chromosome, complete genome. |
|---|---|
| Accession | NC_011896 |
| Length | 3,268,071 |
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The map label for this gene is 221230754
Identifier: 221230754
GI number: 221230754
Start: 2846260
End: 2846724
Strand: Direct
Name: 221230754
Synonym: MLBr_02377
Alternate gene names: NA
Gene position: 2846260-2846724 (Clockwise)
Preceding gene: 221230741
Following gene: 221230755
Centisome position: 87.09
GC content: 52.9
Gene sequence:
>465_bases ATGTCCAAACGCCAACGGGGTAAGGGGATTTCAATTTTCAAGCTGTTGTCACGAATTTGGATTCCACTTGTCATCCTTGT GGTGCTCGTGGTTGGGGGATTCGTAGTGTACCGTGTCCACAGTTATTTCGCCTCCGAGAAACGCGAATCCTACGCAGATA GCAACCTGGGAAGCAGCAAGCCGTTCAACCCCAAGCAGATTGTTTACGAGGTCTTCGGCCCACCCGGAACGGTTGCAGAT ATCAGCTATTTCGATGCTAATTCCGACCCCCAGCGAATCGATGGGGCACAATTGCCATGGTCGTTACTTATGACCACGAC CTTGGCCGCAGTGATGGGAAACCTCGTGGCTCAGGGCAATACTGATAGTATCGGCTGCCGGATCATCGTGGACGGCGTAG TCAAAGCTGAGCGAGTTTCCAACGAAGTCAACGCCTACACCTACTGCCTGGTGAAGTCCGCGTGA
Upstream 100 bases:
>100_bases AACCGACCATCACAAAGGTGTGGCGATCTGAGCTTGTGGTCCGGGTAGTCCGGCACCACGATCTGAAGTTGAACTTGGTC GAGCGGACATCGGGCCGTCA
Downstream 100 bases:
>100_bases CGGTCAAATGCGCGAACGACCTGGACACCCACACCAAGCCACCGTTCGTCGCAAGGATGATCCACAGATTTGCGGTACCG ATCATCTTGGTATGGTTAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 154; Mature: 153
Protein sequence:
>154_residues MSKRQRGKGISIFKLLSRIWIPLVILVVLVVGGFVVYRVHSYFASEKRESYADSNLGSSKPFNPKQIVYEVFGPPGTVAD ISYFDANSDPQRIDGAQLPWSLLMTTTLAAVMGNLVAQGNTDSIGCRIIVDGVVKAERVSNEVNAYTYCLVKSA
Sequences:
>Translated_154_residues MSKRQRGKGISIFKLLSRIWIPLVILVVLVVGGFVVYRVHSYFASEKRESYADSNLGSSKPFNPKQIVYEVFGPPGTVAD ISYFDANSDPQRIDGAQLPWSLLMTTTLAAVMGNLVAQGNTDSIGCRIIVDGVVKAERVSNEVNAYTYCLVKSA >Mature_153_residues SKRQRGKGISIFKLLSRIWIPLVILVVLVVGGFVVYRVHSYFASEKRESYADSNLGSSKPFNPKQIVYEVFGPPGTVADI SYFDANSDPQRIDGAQLPWSLLMTTTLAAVMGNLVAQGNTDSIGCRIIVDGVVKAERVSNEVNAYTYCLVKSA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mmpS family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): MMPS4_MYCLE (P54880)
Other databases:
- EMBL: U15183 - EMBL: AL583925 - PIR: E87206 - RefSeq: NP_302540.1 - EnsemblBacteria: EBMYCT00000028556 - GeneID: 908627 - GenomeReviews: AL450380_GR - KEGG: mle:ML2377 - NMPDR: fig|272631.1.peg.1412 - Leproma: ML2377 - GeneTree: EBGT00050000015314 - HOGENOM: HBG566824 - OMA: TAVGSIM - ProtClustDB: CLSK2299981 - BioCyc: MLEP272631:ML2377-MONOMER - InterPro: IPR008693
Pfam domain/function: PF05423 Mycobact_memb
EC number: NA
Molecular weight: Translated: 16864; Mature: 16732
Theoretical pI: Translated: 9.37; Mature: 9.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x4524c450)-; HASH(0x452b533c)-;
Cys/Met content:
1.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKRQRGKGISIFKLLSRIWIPLVILVVLVVGGFVVYRVHSYFASEKRESYADSNLGSSK CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC PFNPKQIVYEVFGPPGTVADISYFDANSDPQRIDGAQLPWSLLMTTTLAAVMGNLVAQGN CCCHHHHHEECCCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC TDSIGCRIIVDGVVKAERVSNEVNAYTYCLVKSA CCCCCEEEEEHHHHHHHHHHHHHCCEEEEEEECH >Mature Secondary Structure SKRQRGKGISIFKLLSRIWIPLVILVVLVVGGFVVYRVHSYFASEKRESYADSNLGSSK CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC PFNPKQIVYEVFGPPGTVADISYFDANSDPQRIDGAQLPWSLLMTTTLAAVMGNLVAQGN CCCHHHHHEECCCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC TDSIGCRIIVDGVVKAERVSNEVNAYTYCLVKSA CCCCCEEEEEHHHHHHHHHHHHHCCEEEEEEECH
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11234002