| Definition | Mycobacterium leprae Br4923 chromosome, complete genome. |
|---|---|
| Accession | NC_011896 |
| Length | 3,268,071 |
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The map label for this gene is 221230719
Identifier: 221230719
GI number: 221230719
Start: 2739846
End: 2740436
Strand: Direct
Name: 221230719
Synonym: MLBr_02312
Alternate gene names: NA
Gene position: 2739846-2740436 (Clockwise)
Preceding gene: 221230718
Following gene: 221230720
Centisome position: 83.84
GC content: 59.9
Gene sequence:
>591_bases ATGGGCCTGCGGGTGGTTTCCGACGACGGTAGCCCGGAACATTTCCGGCAGGCGCTGTTTCGCGTGCTGGCGTCGGTGGT GGAAATCTGGATGTTGTTAGGAAGTCCCGCGGTAATCTGCAGCATGTTGTCACCTAAGGCCAAACATATCGGCGATATCT TTCCCGGCACAGTCGTAATCAGTGAACGCCGTCCTCAGCGCGGTCCTTCGCCGGCTATGCCACCGTCATTGGCGTGGTGG GCGTCGTCGCTGCAGCTATCGGGCCTCAACACTAGGCAGGCCGAGCTCGCACACCAATTCCTTTCCCGAGCACCGCAACT TGATCCCCAACTACAAGAACAAATGGCTTACCGGATTACTGGTGACGTGATGTCTCGTATAGCCCCACCACCCCCGTCCA GCACCCCGCCACAACTGATGCTGGCCGCCGTGCTCGCCGAAAGACATCGCCATAAGCTGGTACAGCTTCGTCCAACACCG GTCGGCCCGACACCGTCGTCACCGACGGTGTCCAAATATCCCGTCCCTCCCCGGGTTGCCTGGGCAGGCATTTGCAGCAC CCAATTCCTAGTCGCATCCGGACATCGGTAG
Upstream 100 bases:
>100_bases TATCTCGCCTGTTTATCCGAGAGTACCTCGGTCTGGATCGCGGCCAGCAACTTGGGTCTTAGAAACCGCAACGCGGGTAC AGTCACTGGGAAAGATTGCG
Downstream 100 bases:
>100_bases ATTTTCGCTCCTTTCGCTAATGCACGGCCACGGCCGCCAGTGTGGCGAAGTTGGCAACCAACAGCGCCCCATCGACACAG TGAGACTGCGATGCTCGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: Integral Membrane Protein; RDD Domain-Containing Protein; RDD Family Domain-Containing Protein; Conserved Membrane Protein
Number of amino acids: Translated: 196; Mature: 195
Protein sequence:
>196_residues MGLRVVSDDGSPEHFRQALFRVLASVVEIWMLLGSPAVICSMLSPKAKHIGDIFPGTVVISERRPQRGPSPAMPPSLAWW ASSLQLSGLNTRQAELAHQFLSRAPQLDPQLQEQMAYRITGDVMSRIAPPPPSSTPPQLMLAAVLAERHRHKLVQLRPTP VGPTPSSPTVSKYPVPPRVAWAGICSTQFLVASGHR
Sequences:
>Translated_196_residues MGLRVVSDDGSPEHFRQALFRVLASVVEIWMLLGSPAVICSMLSPKAKHIGDIFPGTVVISERRPQRGPSPAMPPSLAWW ASSLQLSGLNTRQAELAHQFLSRAPQLDPQLQEQMAYRITGDVMSRIAPPPPSSTPPQLMLAAVLAERHRHKLVQLRPTP VGPTPSSPTVSKYPVPPRVAWAGICSTQFLVASGHR >Mature_195_residues GLRVVSDDGSPEHFRQALFRVLASVVEIWMLLGSPAVICSMLSPKAKHIGDIFPGTVVISERRPQRGPSPAMPPSLAWWA SSLQLSGLNTRQAELAHQFLSRAPQLDPQLQEQMAYRITGDVMSRIAPPPPSSTPPQLMLAAVLAERHRHKLVQLRPTPV GPTPSSPTVSKYPVPPRVAWAGICSTQFLVASGHR
Specific function: Unknown
COG id: COG1714
COG function: function code S; Predicted membrane protein/domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21357; Mature: 21226
Theoretical pI: Translated: 11.09; Mature: 11.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLRVVSDDGSPEHFRQALFRVLASVVEIWMLLGSPAVICSMLSPKAKHIGDIFPGTVVI CCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHCCCCCEEEE SERRPQRGPSPAMPPSLAWWASSLQLSGLNTRQAELAHQFLSRAPQLDPQLQEQMAYRIT ECCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH GDVMSRIAPPPPSSTPPQLMLAAVLAERHRHKLVQLRPTPVGPTPSSPTVSKYPVPPRVA HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCCCCCCHH WAGICSTQFLVASGHR HHHHHHHHHHCCCCCC >Mature Secondary Structure GLRVVSDDGSPEHFRQALFRVLASVVEIWMLLGSPAVICSMLSPKAKHIGDIFPGTVVI CCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHCCCCCEEEE SERRPQRGPSPAMPPSLAWWASSLQLSGLNTRQAELAHQFLSRAPQLDPQLQEQMAYRIT ECCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH GDVMSRIAPPPPSSTPPQLMLAAVLAERHRHKLVQLRPTPVGPTPSSPTVSKYPVPPRVA HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCCCCCCHH WAGICSTQFLVASGHR HHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA