| Definition | Mycobacterium leprae Br4923 chromosome, complete genome. |
|---|---|
| Accession | NC_011896 |
| Length | 3,268,071 |
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The map label for this gene is crp [H]
Identifier: 221230711
GI number: 221230711
Start: 2726835
End: 2727509
Strand: Direct
Name: crp [H]
Synonym: MLBr_02302
Alternate gene names: 221230711
Gene position: 2726835-2727509 (Clockwise)
Preceding gene: 221230706
Following gene: 221230714
Centisome position: 83.44
GC content: 60.59
Gene sequence:
>675_bases GTGGACGAGATCCTGGCAAGGGCAGGAATCTTCCAAGGGGTGGAACCCAGCGCCGTAGCTGCGCTGACCAAGCAACTCCA ACCTGTCGACTTCCCCCGTGGCCATACAGTTTTCACTGAAGGCGAGCCAGGCGATCGGCTATACATCATCGTTTCGGGAA AGGTCAAGATCGGTCGCCGCTCACCAGATGGCCGGGAGAATCTTCTCACGATCATGGGCCCGTCAGACATGTTCGGCGAG TTGTCAATCTTCGACCCAGGACCACGGACGTCCAGCGCGACCACGATCACCGAAGTCCGAGCGGTATCAATGGACCGCGA TGCTCTACGAGCATGGATCGCCGATCGTCCCGAAATCGCCGAACAGCTATTGCGGGTGCTAGCCCGGCGGCTGCGGCGGA CCAACAACAATCTAGCTGACCTCATCTTCACTGACGTGCCTGGTCGGGTGGCTAAGCAACTGTTGCAGCTCGCCCAGCGT TTCGGCACCCAGGAAGGTGGCGCGATGCGGGTCACCCACGACCTGACGCAAGAGGAGATCGCGCAATTGGTAGGCGCTTC CCGAGAAACGGTGAACAAGGCGCTGGCCGATTTCGCGCACCGCGGCTGGATCCGTTTAGACGGTAAGAGCGTGCTGATCT CGGACTCCGAACGCCTCGCCCGACGAGCGAGGTAA
Upstream 100 bases:
>100_bases GAATCTGTTAGCCCTAGTCTCTAGGCTCGTCAGCGAAACAGAGGTAAACCGAGGTTAGCCTACCCATATGACATCGCAAG AAAACTAATTAAGGGGCAAA
Downstream 100 bases:
>100_bases GCGCCGTTAACATCGAAATCGACTTGCCGACAAGCTTTCTCGACATTTTTCCACGACAACATCAATCTCGGCGAGTGTTA GCGGCGCAGATAATCCAATT
Product: putative Crp/Fnr-family transcriptional regulator
Products: NA
Alternate protein names: cAMP receptor protein; cAMP regulatory protein [H]
Number of amino acids: Translated: 224; Mature: 224
Protein sequence:
>224_residues MDEILARAGIFQGVEPSAVAALTKQLQPVDFPRGHTVFTEGEPGDRLYIIVSGKVKIGRRSPDGRENLLTIMGPSDMFGE LSIFDPGPRTSSATTITEVRAVSMDRDALRAWIADRPEIAEQLLRVLARRLRRTNNNLADLIFTDVPGRVAKQLLQLAQR FGTQEGGAMRVTHDLTQEEIAQLVGASRETVNKALADFAHRGWIRLDGKSVLISDSERLARRAR
Sequences:
>Translated_224_residues MDEILARAGIFQGVEPSAVAALTKQLQPVDFPRGHTVFTEGEPGDRLYIIVSGKVKIGRRSPDGRENLLTIMGPSDMFGE LSIFDPGPRTSSATTITEVRAVSMDRDALRAWIADRPEIAEQLLRVLARRLRRTNNNLADLIFTDVPGRVAKQLLQLAQR FGTQEGGAMRVTHDLTQEEIAQLVGASRETVNKALADFAHRGWIRLDGKSVLISDSERLARRAR >Mature_224_residues MDEILARAGIFQGVEPSAVAALTKQLQPVDFPRGHTVFTEGEPGDRLYIIVSGKVKIGRRSPDGRENLLTIMGPSDMFGE LSIFDPGPRTSSATTITEVRAVSMDRDALRAWIADRPEIAEQLLRVLARRLRRTNNNLADLIFTDVPGRVAKQLLQLAQR FGTQEGGAMRVTHDLTQEEIAQLVGASRETVNKALADFAHRGWIRLDGKSVLISDSERLARRAR
Specific function: This protein complexes with cyclic AMP and binds to specific DNA sites near the promoter to regulate the transcription of one or more genes involved in the induction of competence [H]
COG id: COG0664
COG function: function code T; cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH crp-type DNA-binding domain [H]
Homologues:
Organism=Homo sapiens, GI258613977, Length=140, Percent_Identity=28.5714285714286, Blast_Score=68, Evalue=7e-12, Organism=Homo sapiens, GI258613975, Length=140, Percent_Identity=28.5714285714286, Blast_Score=68, Evalue=7e-12, Organism=Homo sapiens, GI258613973, Length=140, Percent_Identity=28.5714285714286, Blast_Score=68, Evalue=7e-12, Organism=Homo sapiens, GI258613971, Length=140, Percent_Identity=28.5714285714286, Blast_Score=68, Evalue=7e-12, Organism=Homo sapiens, GI258613969, Length=140, Percent_Identity=28.5714285714286, Blast_Score=68, Evalue=7e-12, Organism=Homo sapiens, GI38257139, Length=140, Percent_Identity=28.5714285714286, Blast_Score=68, Evalue=7e-12, Organism=Escherichia coli, GI1789756, Length=187, Percent_Identity=33.6898395721925, Blast_Score=100, Evalue=8e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018490 - InterPro: IPR018488 - InterPro: IPR000595 - InterPro: IPR001808 - InterPro: IPR012318 - InterPro: IPR014710 - InterPro: IPR018335 - InterPro: IPR011991 [H]
Pfam domain/function: PF00027 cNMP_binding; PF00325 Crp [H]
EC number: NA
Molecular weight: Translated: 24782; Mature: 24782
Theoretical pI: Translated: 10.24; Mature: 10.24
Prosite motif: PS50042 CNMP_BINDING_3 ; PS51063 HTH_CRP_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDEILARAGIFQGVEPSAVAALTKQLQPVDFPRGHTVFTEGEPGDRLYIIVSGKVKIGRR CCHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCEEEECCCCCCEEEEEEECCEEECCC SPDGRENLLTIMGPSDMFGELSIFDPGPRTSSATTITEVRAVSMDRDALRAWIADRPEIA CCCCCCCEEEEECCCCCCCCEEEECCCCCCCCCHHHHHHHHHHCCHHHHHHHHCCCHHHH EQLLRVLARRLRRTNNNLADLIFTDVPGRVAKQLLQLAQRFGTQEGGAMRVTHDLTQEEI HHHHHHHHHHHHHCCCCHHHHEEECCCHHHHHHHHHHHHHHCCCCCCEEEEEHHCCHHHH AQLVGASRETVNKALADFAHRGWIRLDGKSVLISDSERLARRAR HHHHCCCHHHHHHHHHHHHHCCEEEECCCEEEEECHHHHHHHCC >Mature Secondary Structure MDEILARAGIFQGVEPSAVAALTKQLQPVDFPRGHTVFTEGEPGDRLYIIVSGKVKIGRR CCHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCEEEECCCCCCEEEEEEECCEEECCC SPDGRENLLTIMGPSDMFGELSIFDPGPRTSSATTITEVRAVSMDRDALRAWIADRPEIA CCCCCCCEEEEECCCCCCCCEEEECCCCCCCCCHHHHHHHHHHCCHHHHHHHHCCCHHHH EQLLRVLARRLRRTNNNLADLIFTDVPGRVAKQLLQLAQRFGTQEGGAMRVTHDLTQEEI HHHHHHHHHHHHHCCCCHHHHEEECCCHHHHHHHHHHHHHHCCCCCCEEEEEHHCCHHHH AQLVGASRETVNKALADFAHRGWIRLDGKSVLISDSERLARRAR HHHHCCCHHHHHHHHHHHHHCCEEEECCCEEEEECHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1542653; 7542800 [H]