| Definition | Mycobacterium leprae Br4923 chromosome, complete genome. |
|---|---|
| Accession | NC_011896 |
| Length | 3,268,071 |
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The map label for this gene is cpsY
Identifier: 221230663
GI number: 221230663
Start: 2624249
End: 2625877
Strand: Direct
Name: cpsY
Synonym: MLBr_02209
Alternate gene names: 221230663
Gene position: 2624249-2625877 (Clockwise)
Preceding gene: 221230659
Following gene: 221230671
Centisome position: 80.3
GC content: 55.0
Gene sequence:
>1629_bases ATGAGCAAGATTGTTTCATGCGAAGACGATCGGCCCGTGCGGCGCACCCTTGAACCCATCATTGTTACCCGGCAGGGAAA GGTTGCCCGGCTCGAGTCCAGTTTGACCCCGCACGAAGCACAGATCGAAGATTTGATCTTTCTGCGAAAGGCGTTGAACC GGGCTGATATTCCTTTCCTATTTATCCGCAACCACAAAAACCGGCCCGTTCTTGCCATCAACATCAAACTGCGCCCCGCG GTCGAACGCGCGCTCGTCACCGCGTGTGCCAGCGAACCTATGTACGCCAAAACAATAGACGAACGCGGGCTTTCTCCCGT GCTAGTGGCCAAAGGTCAATTATCGCAGTCGATCGATCCACGCATCGTGCGGTTGTATCGACGAAGGATTGCACCGGGAG GATTTCGGTTCGGTTCGAGGTTCGGTGTCGAACTGCAGTTCTGGTCCTTCGAGGAGACCCTGATCCGCTGCCCGGTGGAA AACTCCCTGACCCGCAAAGTGCTACCACGCAAAGAAGTAACACCGGCTACCATCAAGCTCTACGGGTACAAATGGCATAC CATTGAGGGGATGTTCACCCCGCACGCGAGTGACGTCACGTTTGACATCGATCTGGTGTTCTCGTGGGTCGACGGTAGTG ATCCAGAATTTCGAGCACGTCGGGCAGCCGAAATGTCGCACCACGTAGTAGGTGAAGGCGACGACGCCGACGCGCGGATC CGACAGATCGACGAGTTGAAATACGCCTTGCGGTCGGTGAACATGTTTGCTCCATGGATCCGGCGCATCTTCATCGCGAC AGATTCGATCCCGCCGTCATGGTTAGCCGATCACCCAATGATCACAATTGTCCCCGCGGAGGACCATTTTTCAGATAGGT CGGCATTGCCAACCTACAACTCACACGCGGTGGAAAGCCAGCTACACCGGATACCCGACCTCAGCGAGCATTTCCTGTAC TCCAATGACGACATGTTTTTCGGTCGCCCACTCAAAGCAAGCATGTTCTTCTCCCCGGGCGGAGTGACCAGGTTCATCGA AGCCAAGACCCGTATAGGATTAGGCACTAACGATCCAACGCGCAGTGGCTTCGAGAATGCGGCCCGGGTTAACCGCCAAC TCCTCTTACGGCGATTTGGACAACTGATTACGCGTCATCTAGAACACACCACGGTTCCGCTACGCAAGAGCGTGCTGTTC GAGATGGAACAAGAATTCCCGGAAGAATTCGCTCGGACCCAGGAAAGTGTGTTCCGGTCCGGAACAGATATATCTGTTAC CAATTCGCTCTACCATTACTACGCGCTGATAACTGGACGCGCTGTCCAACAAGAAAAAGCCAAAGTTCTGTACGTGGACA CCACTTCGTACACAGGCCTCAACTTACTTCCCGAACTGCGGAAACGTCGCAACTACGACTTTTTCTGCCTCAACGACGGT AGTTTCCCCGAAGTCCCCGCAACGGAGCGTGCCGAACGGGTCGTCAGTTTTCTGGAACGCTACTTTCCAATACCGGCACC CTGGGAAAAGGTCGCCACGGACTTCAATCGCCAAGACTTTGCGTCACCGACGGTGTCAGCACCATTGGAGGATGGGCAAA CAGCGAATCCCGCCCAGACGGCTCGATAA
Upstream 100 bases:
>100_bases TTGCCTGCGTATCCCCAGAATACCTAGTCCTGCGCCGATGTGTGGTCTGTGAGATTCCCTCGGTGCCGTGGTTAGACTAT TTCACTAAGGCGGTGTTTCG
Downstream 100 bases:
>100_bases ACAGCCCGCTTTCGGCGATATCGCGTCGCGCCTGCGCAGGAGAAACAAAGGTGCCCACCATGTTTCCGATCCCAAGTGGA ATAACAGAGTGCACCACTGT
Product: putative UDP-glucose-4-epimerase
Products: NA
Alternate protein names: Stealth protein CpsY
Number of amino acids: Translated: 542; Mature: 541
Protein sequence:
>542_residues MSKIVSCEDDRPVRRTLEPIIVTRQGKVARLESSLTPHEAQIEDLIFLRKALNRADIPFLFIRNHKNRPVLAINIKLRPA VERALVTACASEPMYAKTIDERGLSPVLVAKGQLSQSIDPRIVRLYRRRIAPGGFRFGSRFGVELQFWSFEETLIRCPVE NSLTRKVLPRKEVTPATIKLYGYKWHTIEGMFTPHASDVTFDIDLVFSWVDGSDPEFRARRAAEMSHHVVGEGDDADARI RQIDELKYALRSVNMFAPWIRRIFIATDSIPPSWLADHPMITIVPAEDHFSDRSALPTYNSHAVESQLHRIPDLSEHFLY SNDDMFFGRPLKASMFFSPGGVTRFIEAKTRIGLGTNDPTRSGFENAARVNRQLLLRRFGQLITRHLEHTTVPLRKSVLF EMEQEFPEEFARTQESVFRSGTDISVTNSLYHYYALITGRAVQQEKAKVLYVDTTSYTGLNLLPELRKRRNYDFFCLNDG SFPEVPATERAERVVSFLERYFPIPAPWEKVATDFNRQDFASPTVSAPLEDGQTANPAQTAR
Sequences:
>Translated_542_residues MSKIVSCEDDRPVRRTLEPIIVTRQGKVARLESSLTPHEAQIEDLIFLRKALNRADIPFLFIRNHKNRPVLAINIKLRPA VERALVTACASEPMYAKTIDERGLSPVLVAKGQLSQSIDPRIVRLYRRRIAPGGFRFGSRFGVELQFWSFEETLIRCPVE NSLTRKVLPRKEVTPATIKLYGYKWHTIEGMFTPHASDVTFDIDLVFSWVDGSDPEFRARRAAEMSHHVVGEGDDADARI RQIDELKYALRSVNMFAPWIRRIFIATDSIPPSWLADHPMITIVPAEDHFSDRSALPTYNSHAVESQLHRIPDLSEHFLY SNDDMFFGRPLKASMFFSPGGVTRFIEAKTRIGLGTNDPTRSGFENAARVNRQLLLRRFGQLITRHLEHTTVPLRKSVLF EMEQEFPEEFARTQESVFRSGTDISVTNSLYHYYALITGRAVQQEKAKVLYVDTTSYTGLNLLPELRKRRNYDFFCLNDG SFPEVPATERAERVVSFLERYFPIPAPWEKVATDFNRQDFASPTVSAPLEDGQTANPAQTAR >Mature_541_residues SKIVSCEDDRPVRRTLEPIIVTRQGKVARLESSLTPHEAQIEDLIFLRKALNRADIPFLFIRNHKNRPVLAINIKLRPAV ERALVTACASEPMYAKTIDERGLSPVLVAKGQLSQSIDPRIVRLYRRRIAPGGFRFGSRFGVELQFWSFEETLIRCPVEN SLTRKVLPRKEVTPATIKLYGYKWHTIEGMFTPHASDVTFDIDLVFSWVDGSDPEFRARRAAEMSHHVVGEGDDADARIR QIDELKYALRSVNMFAPWIRRIFIATDSIPPSWLADHPMITIVPAEDHFSDRSALPTYNSHAVESQLHRIPDLSEHFLYS NDDMFFGRPLKASMFFSPGGVTRFIEAKTRIGLGTNDPTRSGFENAARVNRQLLLRRFGQLITRHLEHTTVPLRKSVLFE MEQEFPEEFARTQESVFRSGTDISVTNSLYHYYALITGRAVQQEKAKVLYVDTTSYTGLNLLPELRKRRNYDFFCLNDGS FPEVPATERAERVVSFLERYFPIPAPWEKVATDFNRQDFASPTVSAPLEDGQTANPAQTAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the stealth family
Homologues:
Organism=Homo sapiens, GI38202211, Length=106, Percent_Identity=46.2264150943396, Blast_Score=100, Evalue=3e-21, Organism=Drosophila melanogaster, GI28573948, Length=159, Percent_Identity=38.3647798742138, Blast_Score=105, Evalue=1e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): CPSY_MYCLE (Q50025)
Other databases:
- EMBL: U15182 - EMBL: Z95151 - EMBL: AL583924 - PIR: D87185 - RefSeq: NP_302449.1 - EnsemblBacteria: EBMYCT00000028506 - GeneID: 908309 - GenomeReviews: AL450380_GR - KEGG: mle:ML2209 - NMPDR: fig|272631.1.peg.1321 - Leproma: ML2209 - GeneTree: EBGT00050000018383 - HOGENOM: HBG696421 - OMA: THNSQAV - ProtClustDB: CLSK790750 - BioCyc: MLEP272631:ML2209-MONOMER
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 61976; Mature: 61845
Theoretical pI: Translated: 8.78; Mature: 8.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKIVSCEDDRPVRRTLEPIIVTRQGKVARLESSLTPHEAQIEDLIFLRKALNRADIPFL CCCCCCCCCCCCHHHCCCCEEEECCCCHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCEE FIRNHKNRPVLAINIKLRPAVERALVTACASEPMYAKTIDERGLSPVLVAKGQLSQSIDP EEECCCCCCEEEEEEEECHHHHHHHHHHHCCCCCEEHHHHHCCCCEEEEECCCCCCCCCH RIVRLYRRRIAPGGFRFGSRFGVELQFWSFEETLIRCPVENSLTRKVLPRKEVTPATIKL HHHHHHHHHCCCCCCCCCCEECEEEEEECHHHHHEECCCCCCHHHHCCCCCCCCCCEEEE YGYKWHTIEGMFTPHASDVTFDIDLVFSWVDGSDPEFRARRAAEMSHHVVGEGDDADARI EEEEEEEEEEEECCCCCCEEEEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCHHHH RQIDELKYALRSVNMFAPWIRRIFIATDSIPPSWLADHPMITIVPAEDHFSDRSALPTYN HHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCC SHAVESQLHRIPDLSEHFLYSNDDMFFGRPLKASMFFSPGGVTRFIEAKTRIGLGTNDPT CHHHHHHHHHCCCCHHHHEECCCCEEECCCCCCEEEECCCCCEEEEEHHHHCCCCCCCCC RSGFENAARVNRQLLLRRFGQLITRHLEHTTVPLRKSVLFEMEQEFPEEFARTQESVFRS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC GTDISVTNSLYHYYALITGRAVQQEKAKVLYVDTTSYTGLNLLPELRKRRNYDFFCLNDG CCCEEEHHHHHHHHHHHHCCHHHCCCCEEEEEECCCCCCCHHHHHHHHHCCCCEEEECCC SFPEVPATERAERVVSFLERYFPIPAPWEKVATDFNRQDFASPTVSAPLEDGQTANPAQT CCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCHHCCCCCCCCCCCCCCCCCCCCC AR CC >Mature Secondary Structure SKIVSCEDDRPVRRTLEPIIVTRQGKVARLESSLTPHEAQIEDLIFLRKALNRADIPFL CCCCCCCCCCCHHHCCCCEEEECCCCHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCEE FIRNHKNRPVLAINIKLRPAVERALVTACASEPMYAKTIDERGLSPVLVAKGQLSQSIDP EEECCCCCCEEEEEEEECHHHHHHHHHHHCCCCCEEHHHHHCCCCEEEEECCCCCCCCCH RIVRLYRRRIAPGGFRFGSRFGVELQFWSFEETLIRCPVENSLTRKVLPRKEVTPATIKL HHHHHHHHHCCCCCCCCCCEECEEEEEECHHHHHEECCCCCCHHHHCCCCCCCCCCEEEE YGYKWHTIEGMFTPHASDVTFDIDLVFSWVDGSDPEFRARRAAEMSHHVVGEGDDADARI EEEEEEEEEEEECCCCCCEEEEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCHHHH RQIDELKYALRSVNMFAPWIRRIFIATDSIPPSWLADHPMITIVPAEDHFSDRSALPTYN HHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCC SHAVESQLHRIPDLSEHFLYSNDDMFFGRPLKASMFFSPGGVTRFIEAKTRIGLGTNDPT CHHHHHHHHHCCCCHHHHEECCCCEEECCCCCCEEEECCCCCEEEEEHHHHCCCCCCCCC RSGFENAARVNRQLLLRRFGQLITRHLEHTTVPLRKSVLFEMEQEFPEEFARTQESVFRS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC GTDISVTNSLYHYYALITGRAVQQEKAKVLYVDTTSYTGLNLLPELRKRRNYDFFCLNDG CCCEEEHHHHHHHHHHHHCCHHHCCCCEEEEEECCCCCCCHHHHHHHHHCCCCEEEECCC SFPEVPATERAERVVSFLERYFPIPAPWEKVATDFNRQDFASPTVSAPLEDGQTANPAQT CCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCHHCCCCCCCCCCCCCCCCCCCCC AR CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11234002