| Definition | Mycobacterium leprae Br4923 chromosome, complete genome. |
|---|---|
| Accession | NC_011896 |
| Length | 3,268,071 |
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The map label for this gene is 221230656
Identifier: 221230656
GI number: 221230656
Start: 2613382
End: 2614068
Strand: Direct
Name: 221230656
Synonym: MLBr_02200
Alternate gene names: NA
Gene position: 2613382-2614068 (Clockwise)
Preceding gene: 221230655
Following gene: 221230658
Centisome position: 79.97
GC content: 58.81
Gene sequence:
>687_bases GTGACCTCCGACGAGGTCCGTGACGGAGCGGGCAGTCCGGCGGACTCCAGCAAGGGCAACAAGTGTACGGCCGCTGGGAT GTTTCAAGCGGCCAAGCGATCTACGGTGAGCGCAGCCCGCAACATCCCGGCTTTCGACGACTTGCCAGTTCCCTCCGACA CCGCGAATCTACGCGAAGGCGCTAACCTCAATAGCACTTTGCTGGCACTGCTACCGCTGGTCGGTGTGTGGCGCGGTGAA GGGGAGGGTCGTGGACCTAATGGCGACTACCACTTCGGCCAGCAGATCGTGGTCTCGCACGACGGTGGTAACTACCTGAA TTGGGAAGCCAGGTCCTGGCGGCTCAACGACGCTGGCGAATACCAGGAAACTAGCTTACGTGAGACGGGTTTCTGGCGTT TTGTCAGCGATCCATATGATCCTACCGAATCTCAGGCGATCGAATTGCTGTTAGCCCATTCGGCTGGTTACGTAGAATTG TTTTACGGGCGGCCACGCAACGCATCATCGTGGGAATTGGTCACTGATGCCCTAGCATGCAGCAAATCCGGCGTGCTCGT CGGCGGCGCCAAACGGCTTTACGGTATCGTCGAAGGTGGCGACCTCGCCTATGTCGAAGAACGAGTGGATGCCGACGGCG GATTGGTGCCAAATTTATCGGCGAGACTGTACCGATTCGCCGGATAG
Upstream 100 bases:
>100_bases TGACCCGCGCCGGCGACGATGTAGAACGCAGCGATAAGGTGGTGGTCGGCCCCCACAAGTGGGAGGTACCTCCACCCGCT TGCGAGGGAGAGCGGTGCAC
Downstream 100 bases:
>100_bases CGGCCTGGCCAGCTAGGAAGAAGACACCTTCACACGATAACGCTGTGTGTACTGTTCGACGTCTGAGCAGCCGATAGTCT AGGAAAAGGGGTCGGCCGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 228; Mature: 227
Protein sequence:
>228_residues MTSDEVRDGAGSPADSSKGNKCTAAGMFQAAKRSTVSAARNIPAFDDLPVPSDTANLREGANLNSTLLALLPLVGVWRGE GEGRGPNGDYHFGQQIVVSHDGGNYLNWEARSWRLNDAGEYQETSLRETGFWRFVSDPYDPTESQAIELLLAHSAGYVEL FYGRPRNASSWELVTDALACSKSGVLVGGAKRLYGIVEGGDLAYVEERVDADGGLVPNLSARLYRFAG
Sequences:
>Translated_228_residues MTSDEVRDGAGSPADSSKGNKCTAAGMFQAAKRSTVSAARNIPAFDDLPVPSDTANLREGANLNSTLLALLPLVGVWRGE GEGRGPNGDYHFGQQIVVSHDGGNYLNWEARSWRLNDAGEYQETSLRETGFWRFVSDPYDPTESQAIELLLAHSAGYVEL FYGRPRNASSWELVTDALACSKSGVLVGGAKRLYGIVEGGDLAYVEERVDADGGLVPNLSARLYRFAG >Mature_227_residues TSDEVRDGAGSPADSSKGNKCTAAGMFQAAKRSTVSAARNIPAFDDLPVPSDTANLREGANLNSTLLALLPLVGVWRGEG EGRGPNGDYHFGQQIVVSHDGGNYLNWEARSWRLNDAGEYQETSLRETGFWRFVSDPYDPTESQAIELLLAHSAGYVELF YGRPRNASSWELVTDALACSKSGVLVGGAKRLYGIVEGGDLAYVEERVDADGGLVPNLSARLYRFAG
Specific function: May play a role in the intracellular transport of hydrophobic ligands (Potential)
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0678 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y2200_MYCLE (Q9CBC6)
Other databases:
- EMBL: U15182 - EMBL: AL583924 - PIR: C87184 - RefSeq: NP_302442.1 - ProteinModelPortal: Q9CBC6 - SMR: Q9CBC6 - EnsemblBacteria: EBMYCT00000028287 - GeneID: 908461 - GenomeReviews: AL450380_GR - KEGG: mle:ML2200 - NMPDR: fig|272631.1.peg.1314 - Leproma: ML2200 - GeneTree: EBGT00050000017662 - HOGENOM: HBG445899 - OMA: YGLMPNN - ProtClustDB: CLSK790754 - BioCyc: MLEP272631:ML2200-MONOMER - GO: GO:0006810 - HAMAP: MF_01297 - InterPro: IPR011038 - InterPro: IPR014878 - InterPro: IPR022939
Pfam domain/function: PF08768 DUF1794; SSF50814 Calycin
EC number: NA
Molecular weight: Translated: 24521; Mature: 24390
Theoretical pI: Translated: 4.61; Mature: 4.61
Prosite motif: NA
Important sites: BINDING 192-192
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSDEVRDGAGSPADSSKGNKCTAAGMFQAAKRSTVSAARNIPAFDDLPVPSDTANLREG CCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCC ANLNSTLLALLPLVGVWRGEGEGRGPNGDYHFGQQIVVSHDGGNYLNWEARSWRLNDAGE CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCEEECCCCEEECCCCCC YQETSLRETGFWRFVSDPYDPTESQAIELLLAHSAGYVELFYGRPRNASSWELVTDALAC HHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHH SKSGVLVGGAKRLYGIVEGGDLAYVEERVDADGGLVPNLSARLYRFAG CCCCEEEECHHHEEEEECCCCEEEHHHHHCCCCCCCCCHHHHHHCCCC >Mature Secondary Structure TSDEVRDGAGSPADSSKGNKCTAAGMFQAAKRSTVSAARNIPAFDDLPVPSDTANLREG CCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCC ANLNSTLLALLPLVGVWRGEGEGRGPNGDYHFGQQIVVSHDGGNYLNWEARSWRLNDAGE CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCEEECCCCEEECCCCCC YQETSLRETGFWRFVSDPYDPTESQAIELLLAHSAGYVELFYGRPRNASSWELVTDALAC HHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHH SKSGVLVGGAKRLYGIVEGGDLAYVEERVDADGGLVPNLSARLYRFAG CCCCEEEECHHHEEEEECCCCEEEHHHHHCCCCCCCCCHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11234002