| Definition | Mycobacterium leprae Br4923 chromosome, complete genome. |
|---|---|
| Accession | NC_011896 |
| Length | 3,268,071 |
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The map label for this gene is 221230643
Identifier: 221230643
GI number: 221230643
Start: 2588528
End: 2589481
Strand: Reverse
Name: 221230643
Synonym: MLBr_02177
Alternate gene names: NA
Gene position: 2589481-2588528 (Counterclockwise)
Preceding gene: 221230644
Following gene: 221230639
Centisome position: 79.24
GC content: 57.55
Gene sequence:
>954_bases GTGCGTAGATTTCCTTGCGTTCGACGAATCGGAGAGGTCGAGGTGAAGACTGAGAACATCAACTACGCATTTCTCGACGG TGTCCTAGACGGCAGCCACGAGGACGTTTACTATCACTTCGGCATAGCCTCCTCCGACCCGGCTCTCGATGAGCTTCGCG ATGTCAAAGCAGTCATCCTGGCCGGCACTAGGGAGCGTATCACCACGTTTGCCGACCGCTGGAGTGAGCTGAATGGCGGG TCTAAAGTTTCCCGGGTTATTGCCTTTTCAAAAGAGGACCGGTTCGTCACCAGGTACACCGCCGGCGTGCTCTTCGCTTC CCACGGCATGGGTATGGCCAGTGCCTCGATCGCGCTACAGGAGCTCATGCGCTTGGTGTTCTTCCTCAAGCGCGGCGACC TGGAGGCCCTAGATAAGGTATTCTGGTGTCGGGTAGGCACCAGCGGGGGTATCGGACTGCCCAGCGGAACCGTGGTGGTG TCATCTGAGGGCCTCATGGCTGATCTCCAGCCTTACCGATTACTCAGGGGCGGCGACAGTGAGTATTGGTTCGATGGGTG CTTCCCCGCTGGTACTCACAACGCCATCATCGCTGCCAATGAAGGCATCGATGACTTGGCGATGGTATCCGGTAGGACGG TCAGCGGCAACGAGTTCTTCCTTGAACAGTTCCGTCTCGACGGCGCGGTGTGCTTCGAGACACCGACGACAAAGATGGCA TGGCTGCGGTGGCTCGACGAGAATGGTGTGCGTAACATCGAGATGGAGGGCGCCATGATCGCGGGCTATCTCAATCACTG GGGCTTTCCGAAATTCGCGATGATCTGCTGCACACTGCTCAACCGGCTCGAGGGTGACCAGGTAACGGCCACGCCCGTGC AGCTACATAAATTCAGTGAAGATTTAGGTGCGGCGTTGTTCAACTACCTCAAGGTCAGCCTGCTCAACGCTTGA
Upstream 100 bases:
>100_bases AGTCGGGGTGTGTCCTGGAGACTACGGTCTTTTGGACGGCTGTACCACATCGCTAGACGCCCGATGTTGTCCGTGGGTTG CTGTACCAACTTGACCCGCG
Downstream 100 bases:
>100_bases TTGGTTGATTCCTGTCGAGTATGAAGCGAAACCGTTCTGCACCAAAGTTACTTATCACCAAACAATGGTAACTGTAGAGC TGTTTGATCGGTAGAAGCCG
Product: putative uridine phosphorylase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 317; Mature: 317
Protein sequence:
>317_residues MRRFPCVRRIGEVEVKTENINYAFLDGVLDGSHEDVYYHFGIASSDPALDELRDVKAVILAGTRERITTFADRWSELNGG SKVSRVIAFSKEDRFVTRYTAGVLFASHGMGMASASIALQELMRLVFFLKRGDLEALDKVFWCRVGTSGGIGLPSGTVVV SSEGLMADLQPYRLLRGGDSEYWFDGCFPAGTHNAIIAANEGIDDLAMVSGRTVSGNEFFLEQFRLDGAVCFETPTTKMA WLRWLDENGVRNIEMEGAMIAGYLNHWGFPKFAMICCTLLNRLEGDQVTATPVQLHKFSEDLGAALFNYLKVSLLNA
Sequences:
>Translated_317_residues MRRFPCVRRIGEVEVKTENINYAFLDGVLDGSHEDVYYHFGIASSDPALDELRDVKAVILAGTRERITTFADRWSELNGG SKVSRVIAFSKEDRFVTRYTAGVLFASHGMGMASASIALQELMRLVFFLKRGDLEALDKVFWCRVGTSGGIGLPSGTVVV SSEGLMADLQPYRLLRGGDSEYWFDGCFPAGTHNAIIAANEGIDDLAMVSGRTVSGNEFFLEQFRLDGAVCFETPTTKMA WLRWLDENGVRNIEMEGAMIAGYLNHWGFPKFAMICCTLLNRLEGDQVTATPVQLHKFSEDLGAALFNYLKVSLLNA >Mature_317_residues MRRFPCVRRIGEVEVKTENINYAFLDGVLDGSHEDVYYHFGIASSDPALDELRDVKAVILAGTRERITTFADRWSELNGG SKVSRVIAFSKEDRFVTRYTAGVLFASHGMGMASASIALQELMRLVFFLKRGDLEALDKVFWCRVGTSGGIGLPSGTVVV SSEGLMADLQPYRLLRGGDSEYWFDGCFPAGTHNAIIAANEGIDDLAMVSGRTVSGNEFFLEQFRLDGAVCFETPTTKMA WLRWLDENGVRNIEMEGAMIAGYLNHWGFPKFAMICCTLLNRLEGDQVTATPVQLHKFSEDLGAALFNYLKVSLLNA
Specific function: Unknown
COG id: COG2820
COG function: function code F; Uridine phosphorylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI31742508, Length=299, Percent_Identity=31.7725752508361, Blast_Score=122, Evalue=5e-28, Organism=Homo sapiens, GI4507839, Length=299, Percent_Identity=31.7725752508361, Blast_Score=122, Evalue=5e-28, Organism=Homo sapiens, GI27597096, Length=295, Percent_Identity=29.1525423728814, Blast_Score=111, Evalue=9e-25, Organism=Homo sapiens, GI205360941, Length=295, Percent_Identity=29.1525423728814, Blast_Score=111, Evalue=1e-24, Organism=Caenorhabditis elegans, GI71997986, Length=271, Percent_Identity=33.5793357933579, Blast_Score=95, Evalue=5e-20, Organism=Drosophila melanogaster, GI24650445, Length=297, Percent_Identity=33.6700336700337, Blast_Score=136, Evalue=2e-32, Organism=Drosophila melanogaster, GI24650443, Length=289, Percent_Identity=34.2560553633218, Blast_Score=135, Evalue=3e-32, Organism=Drosophila melanogaster, GI19922786, Length=318, Percent_Identity=31.1320754716981, Blast_Score=127, Evalue=1e-29, Organism=Drosophila melanogaster, GI281364312, Length=298, Percent_Identity=30.2013422818792, Blast_Score=107, Evalue=9e-24, Organism=Drosophila melanogaster, GI24581318, Length=298, Percent_Identity=30.2013422818792, Blast_Score=107, Evalue=9e-24, Organism=Drosophila melanogaster, GI24581316, Length=298, Percent_Identity=30.2013422818792, Blast_Score=107, Evalue=9e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35114; Mature: 35114
Theoretical pI: Translated: 5.08; Mature: 5.08
Prosite motif: PS01232 PNP_UDP_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRFPCVRRIGEVEVKTENINYAFLDGVLDGSHEDVYYHFGIASSDPALDELRDVKAVIL CCCCCHHHHCCCEEEEECCCCEEEEECCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHEE AGTRERITTFADRWSELNGGSKVSRVIAFSKEDRFVTRYTAGVLFASHGMGMASASIALQ ECCHHHHHHHHHHHHHCCCCHHHHHHEEECCCCCEEEHHHHHHHEECCCCCHHHHHHHHH ELMRLVFFLKRGDLEALDKVFWCRVGTSGGIGLPSGTVVVSSEGLMADLQPYRLLRGGDS HHHHHHHHHHCCCHHHHHHHHEEEECCCCCCCCCCCEEEEECCCCEECCCHHHHHCCCCC EYWFDGCFPAGTHNAIIAANEGIDDLAMVSGRTVSGNEFFLEQFRLDGAVCFETPTTKMA CEEECCCCCCCCCCEEEEECCCCCHHHHHCCCEECCCHHHHHHHHCCCEEEECCCCCHHH WLRWLDENGVRNIEMEGAMIAGYLNHWGFPKFAMICCTLLNRLEGDQVTATPVQLHKFSE HHHHHCCCCCEEEEECCHHEEHHHHHCCCHHHHHHHHHHHHHCCCCCEEECHHHHHHHHH DLGAALFNYLKVSLLNA HHHHHHHHHHHHHHCCC >Mature Secondary Structure MRRFPCVRRIGEVEVKTENINYAFLDGVLDGSHEDVYYHFGIASSDPALDELRDVKAVIL CCCCCHHHHCCCEEEEECCCCEEEEECCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHEE AGTRERITTFADRWSELNGGSKVSRVIAFSKEDRFVTRYTAGVLFASHGMGMASASIALQ ECCHHHHHHHHHHHHHCCCCHHHHHHEEECCCCCEEEHHHHHHHEECCCCCHHHHHHHHH ELMRLVFFLKRGDLEALDKVFWCRVGTSGGIGLPSGTVVVSSEGLMADLQPYRLLRGGDS HHHHHHHHHHCCCHHHHHHHHEEEECCCCCCCCCCCEEEEECCCCEECCCHHHHHCCCCC EYWFDGCFPAGTHNAIIAANEGIDDLAMVSGRTVSGNEFFLEQFRLDGAVCFETPTTKMA CEEECCCCCCCCCCEEEEECCCCCHHHHHCCCEECCCHHHHHHHHCCCEEEECCCCCHHH WLRWLDENGVRNIEMEGAMIAGYLNHWGFPKFAMICCTLLNRLEGDQVTATPVQLHKFSE HHHHHCCCCCEEEEECCHHEEHHHHHCCCHHHHHHHHHHHHHCCCCCEEECHHHHHHHHH DLGAALFNYLKVSLLNA HHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA