| Definition | Mycobacterium leprae Br4923 chromosome, complete genome. |
|---|---|
| Accession | NC_011896 |
| Length | 3,268,071 |
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The map label for this gene is 221230596
Identifier: 221230596
GI number: 221230596
Start: 2466370
End: 2467065
Strand: Reverse
Name: 221230596
Synonym: MLBr_02073
Alternate gene names: NA
Gene position: 2467065-2466370 (Counterclockwise)
Preceding gene: 221230597
Following gene: 221230595
Centisome position: 75.49
GC content: 60.2
Gene sequence:
>696_bases ATGACGCATCTAGTGACCAGAGCGCGATCGGCGAGAGGAAACACCGTGAGCGAGCAGCCACGTCAAGGTCAGCTGGACCT TGCGGACTACCGGGACACCCCGACCGCTACAACCCATGGTGACATTGGCCTCAATGGCCCTACCGCAGTAAGCGGACCAG CACAACCCGGACTCTTCCCTGACGACTCCGTGCCTGACGAGTTGGTTGGCTACCGCGGGCCCAGCGCCTGCCAGATCGCC GGGATCACGTACCGCCAGCTGGACTATTGGGCACGGACGTCATTAGTGGTTCCATCTATCCGGGGTGCGGCTGGCTCCGG CAGCCAGCGCCTGTACTCGTTCAAGGACATCCTGGTTCTCAAGATCGTCAAGCGATTGCTCGACACCGGTATCTCGTTGC ACAATATTCGGGTTGCCGTTGACCATTTACGCCAGCGTGGCGTTCAGGATCTAGCCAATATCACTTTGTTCTCCGACGGC ACTACGGTGTATGAGTGCACGTCGGCAGAAGAGGTTGTCGACCTGTTACAAGGCGGGCAGGGCGTGTTCGGTATTGCCGT GTCCGGCGCTATGCGTGAGCTGACCGGCGTGATCGACGACTTCCGTGGTGAGCGCGCCGATGGTGGCGAGTCGATAGCTG CGCCGGAAGACGAACTGGCTTCCCGGCGCAAGCATCGCGACCGTAAAATTGGCTAA
Upstream 100 bases:
>100_bases ACGGTCATATTTTGATGACCACTTCAGGTAGGGCAACTACCGAACAGCGTATGCTTTTTAGCACTCGGGCCTGACCAAAC ATGGCTACCGAGGGGAGCCA
Downstream 100 bases:
>100_bases CTGCAGCGTAGTTAGCGGCTTCCTATTGTTTACCCTCGCGTGCGAGGCGGAGGGTAAAGTTGGATCTGCATCGCCCTCAC GCGGGAGAGTTCTGTGACCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 231; Mature: 230
Protein sequence:
>231_residues MTHLVTRARSARGNTVSEQPRQGQLDLADYRDTPTATTHGDIGLNGPTAVSGPAQPGLFPDDSVPDELVGYRGPSACQIA GITYRQLDYWARTSLVVPSIRGAAGSGSQRLYSFKDILVLKIVKRLLDTGISLHNIRVAVDHLRQRGVQDLANITLFSDG TTVYECTSAEEVVDLLQGGQGVFGIAVSGAMRELTGVIDDFRGERADGGESIAAPEDELASRRKHRDRKIG
Sequences:
>Translated_231_residues MTHLVTRARSARGNTVSEQPRQGQLDLADYRDTPTATTHGDIGLNGPTAVSGPAQPGLFPDDSVPDELVGYRGPSACQIA GITYRQLDYWARTSLVVPSIRGAAGSGSQRLYSFKDILVLKIVKRLLDTGISLHNIRVAVDHLRQRGVQDLANITLFSDG TTVYECTSAEEVVDLLQGGQGVFGIAVSGAMRELTGVIDDFRGERADGGESIAAPEDELASRRKHRDRKIG >Mature_230_residues THLVTRARSARGNTVSEQPRQGQLDLADYRDTPTATTHGDIGLNGPTAVSGPAQPGLFPDDSVPDELVGYRGPSACQIAG ITYRQLDYWARTSLVVPSIRGAAGSGSQRLYSFKDILVLKIVKRLLDTGISLHNIRVAVDHLRQRGVQDLANITLFSDGT TVYECTSAEEVVDLLQGGQGVFGIAVSGAMRELTGVIDDFRGERADGGESIAAPEDELASRRKHRDRKIG
Specific function: Unknown
COG id: COG0789
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH merR-type DNA-binding domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009061 - InterPro: IPR000551 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24857; Mature: 24726
Theoretical pI: Translated: 6.36; Mature: 6.36
Prosite motif: PS50937 HTH_MERR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTHLVTRARSARGNTVSEQPRQGQLDLADYRDTPTATTHGDIGLNGPTAVSGPAQPGLFP CCCHHHHHHHCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC DDSVPDELVGYRGPSACQIAGITYRQLDYWARTSLVVPSIRGAAGSGSQRLYSFKDILVL CCCCCHHHHCCCCCCCEEEECCHHHHHHHHHHHHEECCCCCCCCCCCCHHHHHHHHHHHH KIVKRLLDTGISLHNIRVAVDHLRQRGVQDLANITLFSDGTTVYECTSAEEVVDLLQGGQ HHHHHHHHCCCCHHHHHHHHHHHHHHCHHHHHHEEEECCCCEEEEECCHHHHHHHHHCCC GVFGIAVSGAMRELTGVIDDFRGERADGGESIAAPEDELASRRKHRDRKIG CEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCC >Mature Secondary Structure THLVTRARSARGNTVSEQPRQGQLDLADYRDTPTATTHGDIGLNGPTAVSGPAQPGLFP CCHHHHHHHCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC DDSVPDELVGYRGPSACQIAGITYRQLDYWARTSLVVPSIRGAAGSGSQRLYSFKDILVL CCCCCHHHHCCCCCCCEEEECCHHHHHHHHHHHHEECCCCCCCCCCCCHHHHHHHHHHHH KIVKRLLDTGISLHNIRVAVDHLRQRGVQDLANITLFSDGTTVYECTSAEEVVDLLQGGQ HHHHHHHHCCCCHHHHHHHHHHHHHHCHHHHHHEEEECCCCEEEEECCHHHHHHHHHCCC GVFGIAVSGAMRELTGVIDDFRGERADGGESIAAPEDELASRRKHRDRKIG CEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]