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The map label for this gene is xseB [H]

Identifier: 221230523

GI number: 221230523

Start: 2327554

End: 2327817

Strand: Direct

Name: xseB [H]

Synonym: MLBr_01941

Alternate gene names: 221230523

Gene position: 2327554-2327817 (Clockwise)

Preceding gene: 221230522

Following gene: 221230524

Centisome position: 71.22

GC content: 51.89

Gene sequence:

>264_bases
ATGGTCCCTGAAGACGATACCGCCGCGATGCGCTCCACTACTCCTATTAATACTACACCTATTAATCAACTTGGCTATGA
AGCTTGCCGAGACGAGCTGATCGAAGTTGTGCGACTCTTGGAACAGGGTGGGCTAAATCTCGATATGTCGCTGAAGCTTT
GGGAAAGAGGAGAACAGCTCGCTAAAAGATGTGAAGAGCACTTAGATGGCGCTCGCCAGCGAGTCGCCGATGTGCTCTCC
GCCAGGCAGGTCGAAGAAGCCTAA

Upstream 100 bases:

>100_bases
GCGGCAGTGCTGCGGTCAGTCGATGATGCACCCACAGGCACCAGACTGCGGGTGCGGGTCTCTGACGGCGCCATAGTGGC
AGTTAGTGAAGGACGGGCCG

Downstream 100 bases:

>100_bases
TGCCGATCAAATTAAAGACCGGTTTCCTTTAACTTAAACACGTGTCAGTTATGCTTCGCGGCGTGGGTAACGCATCGTTG
ACGACCGAGCTCGGACGCGT

Product: exodeoxyribonuclease VII small subunit

Products: NA

Alternate protein names: Exodeoxyribonuclease VII small subunit; Exonuclease VII small subunit [H]

Number of amino acids: Translated: 87; Mature: 87

Protein sequence:

>87_residues
MVPEDDTAAMRSTTPINTTPINQLGYEACRDELIEVVRLLEQGGLNLDMSLKLWERGEQLAKRCEEHLDGARQRVADVLS
ARQVEEA

Sequences:

>Translated_87_residues
MVPEDDTAAMRSTTPINTTPINQLGYEACRDELIEVVRLLEQGGLNLDMSLKLWERGEQLAKRCEEHLDGARQRVADVLS
ARQVEEA
>Mature_87_residues
MVPEDDTAAMRSTTPINTTPINQLGYEACRDELIEVVRLLEQGGLNLDMSLKLWERGEQLAKRCEEHLDGARQRVADVLS
ARQVEEA

Specific function: Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides [H]

COG id: COG1722

COG function: function code L; Exonuclease VII small subunit

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the xseB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003761
- ProDom:   PD028235 [H]

Pfam domain/function: PF02609 Exonuc_VII_S [H]

EC number: =3.1.11.6 [H]

Molecular weight: Translated: 9795; Mature: 9795

Theoretical pI: Translated: 4.31; Mature: 4.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVPEDDTAAMRSTTPINTTPINQLGYEACRDELIEVVRLLEQGGLNLDMSLKLWERGEQL
CCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
AKRCEEHLDGARQRVADVLSARQVEEA
HHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MVPEDDTAAMRSTTPINTTPINQLGYEACRDELIEVVRLLEQGGLNLDMSLKLWERGEQL
CCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
AKRCEEHLDGARQRVADVLSARQVEEA
HHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11234002 [H]