Click here to switch to the map view.

The map label for this gene is uspE [H]

Identifier: 221230422

GI number: 221230422

Start: 2144176

End: 2145000

Strand: Direct

Name: uspE [H]

Synonym: MLBr_01769

Alternate gene names: 221230422

Gene position: 2144176-2145000 (Clockwise)

Preceding gene: 221230421

Following gene: 221230423

Centisome position: 65.61

GC content: 56.61

Gene sequence:

>825_bases
ATGAGCTCACCTAGTCGCTTGTCCAACGCCGTGACTTACGCCGGCCTGACACTCGGTGCGCTGATCACCGTCGCACCGTT
CGCACTCGGCTTACTCACCTCGTTCACGTCGGCGCATCAATTTACGACCGGTACACCGCTGCAATTGCCACGACCACCCA
CGCTGGCTAACTACGCTGGTTTGTCCGGTGCTGGATTTCTGCGCGCGACCGCGGTTACCGCGTTGATGACGGCGGTAATT
CTTCTTGGCCAGCTAACCTTCTCGGTGCTGGCTGGCTACGCGTTCGCACGGTTACGGTTTCCCGGGCGCGATACCCTGTT
TTGGGCCTACATTATGACATTGATGGTGCCGGCGACGGTCACGGTGGTGCCGATGTATATGATGATGGCCCAAGTCGGCC
TCCGTAACACATTTTGGGCGCTGGTGCTGCCGTTTATGTTTGGCTCCCCATACGCAATTTTCCTGCTGCGCGAACACTTT
CGCATCATCCCAAATGATTTGATCAACGCGGCACGTCTCGACGGCGCTAACACTCTGGACGTGATCGTGCATGTTGTGAT
TCCGTCCAACCGCTCGGTTCTAGCGGCCTTGACACTTATCACAGTAGTCTCGCAGTGGAATAACTTCATGTGGCCGTTGG
TGATCACTAGCGGCAACAAGTGGCGTGTGCTTACGGTAGCGACAGCTGACCTACAGTCCCGATTCAACGCTCAGTGGACG
CTGGTAATGGCCGCTACCACGGTTGCAATCGTTCCGCTGATCGTACTTTTCGTTGGATTCCAGCGGCACATCATCCCCTC
GATCGTCGTCTCGGGGCTGAAATGA

Upstream 100 bases:

>100_bases
GCGGCCATTGGGCGAGCATCGGTGATGGCAGTGTTATTATTCGTCGTCCTATTCGGCGTCACTGTTGTTCAACATTTGTA
CTTCCAGCGTCGGATCAGCT

Downstream 100 bases:

>100_bases
GCTGCCTTGACACCGAGATTGCCTTCAGGCTCGTGACCTTCGCGGATCCACGACTACAGCAGCAATTGCAACGTGCGTGT
AGGCATACGACGTGACCCGG

Product: sugar transport integral membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 274; Mature: 273

Protein sequence:

>274_residues
MSSPSRLSNAVTYAGLTLGALITVAPFALGLLTSFTSAHQFTTGTPLQLPRPPTLANYAGLSGAGFLRATAVTALMTAVI
LLGQLTFSVLAGYAFARLRFPGRDTLFWAYIMTLMVPATVTVVPMYMMMAQVGLRNTFWALVLPFMFGSPYAIFLLREHF
RIIPNDLINAARLDGANTLDVIVHVVIPSNRSVLAALTLITVVSQWNNFMWPLVITSGNKWRVLTVATADLQSRFNAQWT
LVMAATTVAIVPLIVLFVGFQRHIIPSIVVSGLK

Sequences:

>Translated_274_residues
MSSPSRLSNAVTYAGLTLGALITVAPFALGLLTSFTSAHQFTTGTPLQLPRPPTLANYAGLSGAGFLRATAVTALMTAVI
LLGQLTFSVLAGYAFARLRFPGRDTLFWAYIMTLMVPATVTVVPMYMMMAQVGLRNTFWALVLPFMFGSPYAIFLLREHF
RIIPNDLINAARLDGANTLDVIVHVVIPSNRSVLAALTLITVVSQWNNFMWPLVITSGNKWRVLTVATADLQSRFNAQWT
LVMAATTVAIVPLIVLFVGFQRHIIPSIVVSGLK
>Mature_273_residues
SSPSRLSNAVTYAGLTLGALITVAPFALGLLTSFTSAHQFTTGTPLQLPRPPTLANYAGLSGAGFLRATAVTALMTAVIL
LGQLTFSVLAGYAFARLRFPGRDTLFWAYIMTLMVPATVTVVPMYMMMAQVGLRNTFWALVLPFMFGSPYAIFLLREHFR
IIPNDLINAARLDGANTLDVIVHVVIPSNRSVLAALTLITVVSQWNNFMWPLVITSGNKWRVLTVATADLQSRFNAQWTL
VMAATTVAIVPLIVLFVGFQRHIIPSIVVSGLK

Specific function: Part of the binding-protein-dependent transport system for L-arabinose. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0395

COG function: function code G; ABC-type sugar transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789860, Length=220, Percent_Identity=31.8181818181818, Blast_Score=115, Evalue=3e-27,
Organism=Escherichia coli, GI1787571, Length=284, Percent_Identity=27.4647887323944, Blast_Score=105, Evalue=5e-24,
Organism=Escherichia coli, GI1790464, Length=200, Percent_Identity=24.5, Blast_Score=66, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 29787; Mature: 29656

Theoretical pI: Translated: 11.57; Mature: 11.57

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSPSRLSNAVTYAGLTLGALITVAPFALGLLTSFTSAHQFTTGTPLQLPRPPTLANYAG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHCCC
LSGAGFLRATAVTALMTAVILLGQLTFSVLAGYAFARLRFPGRDTLFWAYIMTLMVPATV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHH
TVVPMYMMMAQVGLRNTFWALVLPFMFGSPYAIFLLREHFRIIPNDLINAARLDGANTLD
HHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHCCCCCEEH
VIVHVVIPSNRSVLAALTLITVVSQWNNFMWPLVITSGNKWRVLTVATADLQSRFNAQWT
EEEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCEEEEEEEEHHHHHHCCCCEE
LVMAATTVAIVPLIVLFVGFQRHIIPSIVVSGLK
EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SSPSRLSNAVTYAGLTLGALITVAPFALGLLTSFTSAHQFTTGTPLQLPRPPTLANYAG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHCCC
LSGAGFLRATAVTALMTAVILLGQLTFSVLAGYAFARLRFPGRDTLFWAYIMTLMVPATV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHH
TVVPMYMMMAQVGLRNTFWALVLPFMFGSPYAIFLLREHFRIIPNDLINAARLDGANTLD
HHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHCCCCCEEH
VIVHVVIPSNRSVLAALTLITVVSQWNNFMWPLVITSGNKWRVLTVATADLQSRFNAQWT
EEEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCEEEEEEEEHHHHHHCCCCEE
LVMAATTVAIVPLIVLFVGFQRHIIPSIVVSGLK
EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11058132 [H]