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The map label for this gene is yciR [C]

Identifier: 221230415

GI number: 221230415

Start: 2121246

End: 2122154

Strand: Reverse

Name: yciR [C]

Synonym: MLBr_01752

Alternate gene names: 221230415

Gene position: 2122154-2121246 (Counterclockwise)

Preceding gene: 221230416

Following gene: 221230414

Centisome position: 64.94

GC content: 57.32

Gene sequence:

>909_bases
TTGCCTATCGAGGGTGCTATGCGGAGCAGTTCGCTGCCGGATGGGTGTAGTGACAGGTCAGCCGATTCGCGCGGCAGTGG
CGAGGTAAAAGACCGAAGTAGTGGATGGTTTTACGGCCATCACGATCGCGAGCAGCGGAGCGTCCACGATGGTCTGTTGC
AGGTGATTCCTGCTGCACTGGATCGCGGAGAATTTTTCCTCGTCTACCAGCCGATTGTCCGGCTTAATGACAAACGCTTC
ATCGGCGTCGAGGCGTTACTGCGTTGGGCGCATCCGACGCTGGGTACCCTACTCCCAGCGCGATTCATCAGCCTTGCCGA
GCGAAACGGCATGATAGTACCACTCACTACCTTCGTGATTGAGCAGGCCTGCCGACATATCCGCAACTGGCGTGACGACA
GCACCAATCCGCGACCGTTCGTCAGCGTCAACGTCTCGGCCCGCAACATTCGTGATCCCAGTTTTCTCTCGATGGTCGAG
CGGGTGCTTGGCGAAACTGGTCTGCCTGCCCACGCGTTGCGGCTCGAACTCACTGAGAACGCGAGCCTGAGCATAGATGA
GGCATCGATCACCAGGCTGCAGGAGCTGTCCGCGTTAGGCGTGGGTATCGCGATCGACGACTTCGGTACTGGATTTTCCA
GCCTCGCTTATTTACGCAACTTACCCGTCGACATGGTCAAACTCGCCGGCGAGTTCATCGAGAACCTCGGTGGTGATATC
CGTGGCCGGTTGGCTGATGAACAGATCACCCGGGCAATGATTGACCTTGCCTTCAAACTTGGGATCATTGTTTGCGCCAA
GCGAGTTGAAACGCCCGGTCAAGCTGCTAGGTTGCGTGATTTCGGCTGCGACGCTGCCCAAGGCTGGCATTTTGCGAAAG
CGCTACCGGCCGATTTTTTCACTGAGTAG

Upstream 100 bases:

>100_bases
AACTGGCGTGATGTCAGCATCGGAAATTGCGGGTTGCGACGATTCGGGTGGCGTATCTGCGGATGCCCTGCGGTACGTCG
ACATTGAATGCCTGTCGACA

Downstream 100 bases:

>100_bases
TAGGTCGAATAGTGAGAGCAAATCTATGGTGGCTCGCAGCTAGCAAACCGCGGCGCGTGTCAATTAGTTGTAGCGGCGAG
CGAGGGCCACCATATATTGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 302; Mature: 301

Protein sequence:

>302_residues
MPIEGAMRSSSLPDGCSDRSADSRGSGEVKDRSSGWFYGHHDREQRSVHDGLLQVIPAALDRGEFFLVYQPIVRLNDKRF
IGVEALLRWAHPTLGTLLPARFISLAERNGMIVPLTTFVIEQACRHIRNWRDDSTNPRPFVSVNVSARNIRDPSFLSMVE
RVLGETGLPAHALRLELTENASLSIDEASITRLQELSALGVGIAIDDFGTGFSSLAYLRNLPVDMVKLAGEFIENLGGDI
RGRLADEQITRAMIDLAFKLGIIVCAKRVETPGQAARLRDFGCDAAQGWHFAKALPADFFTE

Sequences:

>Translated_302_residues
MPIEGAMRSSSLPDGCSDRSADSRGSGEVKDRSSGWFYGHHDREQRSVHDGLLQVIPAALDRGEFFLVYQPIVRLNDKRF
IGVEALLRWAHPTLGTLLPARFISLAERNGMIVPLTTFVIEQACRHIRNWRDDSTNPRPFVSVNVSARNIRDPSFLSMVE
RVLGETGLPAHALRLELTENASLSIDEASITRLQELSALGVGIAIDDFGTGFSSLAYLRNLPVDMVKLAGEFIENLGGDI
RGRLADEQITRAMIDLAFKLGIIVCAKRVETPGQAARLRDFGCDAAQGWHFAKALPADFFTE
>Mature_301_residues
PIEGAMRSSSLPDGCSDRSADSRGSGEVKDRSSGWFYGHHDREQRSVHDGLLQVIPAALDRGEFFLVYQPIVRLNDKRFI
GVEALLRWAHPTLGTLLPARFISLAERNGMIVPLTTFVIEQACRHIRNWRDDSTNPRPFVSVNVSARNIRDPSFLSMVER
VLGETGLPAHALRLELTENASLSIDEASITRLQELSALGVGIAIDDFGTGFSSLAYLRNLPVDMVKLAGEFIENLGGDIR
GRLADEQITRAMIDLAFKLGIIVCAKRVETPGQAARLRDFGCDAAQGWHFAKALPADFFTE

Specific function: Unknown

COG id: COG2200

COG function: function code T; FOG: EAL domain

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 EAL domain [H]

Homologues:

Organism=Escherichia coli, GI1787541, Length=242, Percent_Identity=35.9504132231405, Blast_Score=149, Evalue=2e-37,
Organism=Escherichia coli, GI87081921, Length=270, Percent_Identity=34.0740740740741, Blast_Score=145, Evalue=4e-36,
Organism=Escherichia coli, GI1790496, Length=244, Percent_Identity=35.2459016393443, Blast_Score=144, Evalue=6e-36,
Organism=Escherichia coli, GI1787055, Length=242, Percent_Identity=35.5371900826446, Blast_Score=135, Evalue=3e-33,
Organism=Escherichia coli, GI1788502, Length=247, Percent_Identity=35.6275303643725, Blast_Score=133, Evalue=1e-32,
Organism=Escherichia coli, GI87081845, Length=241, Percent_Identity=35.2697095435685, Blast_Score=130, Evalue=8e-32,
Organism=Escherichia coli, GI87081743, Length=244, Percent_Identity=30.7377049180328, Blast_Score=119, Evalue=3e-28,
Organism=Escherichia coli, GI87081980, Length=243, Percent_Identity=33.3333333333333, Blast_Score=110, Evalue=8e-26,
Organism=Escherichia coli, GI226510982, Length=247, Percent_Identity=31.1740890688259, Blast_Score=110, Evalue=1e-25,
Organism=Escherichia coli, GI1786507, Length=251, Percent_Identity=29.0836653386454, Blast_Score=105, Evalue=3e-24,
Organism=Escherichia coli, GI1788849, Length=255, Percent_Identity=30.5882352941176, Blast_Score=96, Evalue=2e-21,
Organism=Escherichia coli, GI87082096, Length=245, Percent_Identity=29.3877551020408, Blast_Score=96, Evalue=2e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001633 [H]

Pfam domain/function: PF00563 EAL [H]

EC number: NA

Molecular weight: Translated: 33347; Mature: 33216

Theoretical pI: Translated: 6.17; Mature: 6.17

Prosite motif: PS50883 EAL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPIEGAMRSSSLPDGCSDRSADSRGSGEVKDRSSGWFYGHHDREQRSVHDGLLQVIPAAL
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
DRGEFFLVYQPIVRLNDKRFIGVEALLRWAHPTLGTLLPARFISLAERNGMIVPLTTFVI
CCCCEEEEEEHHHHCCCCCEECHHHHHHHHCCHHHHHHHHHHHHHHHCCCEEEHHHHHHH
EQACRHIRNWRDDSTNPRPFVSVNVSARNIRDPSFLSMVERVLGETGLPAHALRLELTEN
HHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEECCC
ASLSIDEASITRLQELSALGVGIAIDDFGTGFSSLAYLRNLPVDMVKLAGEFIENLGGDI
CCCEECHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCHH
RGRLADEQITRAMIDLAFKLGIIVCAKRVETPGQAARLRDFGCDAAQGWHFAKALPADFF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCHHHHHCCHHHC
TE
CC
>Mature Secondary Structure 
PIEGAMRSSSLPDGCSDRSADSRGSGEVKDRSSGWFYGHHDREQRSVHDGLLQVIPAAL
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
DRGEFFLVYQPIVRLNDKRFIGVEALLRWAHPTLGTLLPARFISLAERNGMIVPLTTFVI
CCCCEEEEEEHHHHCCCCCEECHHHHHHHHCCHHHHHHHHHHHHHHHCCCEEEHHHHHHH
EQACRHIRNWRDDSTNPRPFVSVNVSARNIRDPSFLSMVERVLGETGLPAHALRLELTEN
HHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEECCC
ASLSIDEASITRLQELSALGVGIAIDDFGTGFSSLAYLRNLPVDMVKLAGEFIENLGGDI
CCCEECHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCHH
RGRLADEQITRAMIDLAFKLGIIVCAKRVETPGQAARLRDFGCDAAQGWHFAKALPADFF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCHHHHHCCHHHC
TE
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]