| Definition | Mycobacterium leprae Br4923 chromosome, complete genome. |
|---|---|
| Accession | NC_011896 |
| Length | 3,268,071 |
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The map label for this gene is 221230343
Identifier: 221230343
GI number: 221230343
Start: 1975792
End: 1976949
Strand: Reverse
Name: 221230343
Synonym: MLBr_01639
Alternate gene names: NA
Gene position: 1976949-1975792 (Counterclockwise)
Preceding gene: 221230345
Following gene: 221230342
Centisome position: 60.49
GC content: 62.18
Gene sequence:
>1158_bases ATGAGTGCGCGGTTGGCTGATGTTATCGAAGTCTTGGATCACGCCTACCCGCCGCGGTTTGCCCAGTCTTGGGATTCGGT TGGTCTGGTATGCGGCGACCCCGAGGATGTGCTGGAGGCGATAACTATCGCGGTCGACGCCACGCCGGCGGTCATCGACG AAGTGCCCGATTCCGGCTTGTTACTGGTTCATCATCCATTGTTGTTACACGGGGTCGACACGGTGGCGGTCAGCACGCCG AAGGGTGCGTTGGTACACCGCCTAATCCGCTCCGGGCGTTCATTGTTCACCGCGCACACCAACGCAGACTCGGCATCACC CGGTGTGTCAGACGCGTTAGCACACGTCTTTGGTCTCACCGTCGACGCGGTACTTGAGCCTTTGCTCGGTGTGGCCAGCC TCGACAAGTGGGTCATCTATGTGCCACTCGAGCACGTAGCAGCGGTGCAGGCGGCGGTGTTTGAGGCTGGTGCCGGCCAC ATCGGCGACTACTCGCACTGCAGCTGGAGCGTAACCGGTACCGGGCAGTTCATGCCGCATGACGGGGCGTCGCCTGTGGT GGGTAGCATCGGCGCCATCGAGCGGGTGGCCGAAGACCGGGTTGAGGTTGTAGCACCTGCACGCGCACGGGCTGCTGTGT TATCGGCGATGCACGCCGCGCATCCCTACGAAGAGCCGGCGTTCGATATCTTTGCTCTGGTGCCTCCGCCTGGGGATGTC GGCTTGGGCCGCATTGGAACACTGCCGCGACCAGAATCGCTAAGCGCTTTCGTTGCCAGGGTTGGCGCCGCATTGCCGCA AACATCCTCGGGCGTGCGCGCCACGGGAGACCCCGACATGCTAGTGTCGCGGGTCGCGGTGTGCGGTGGCGCCGGGGATT CGTTGCTGAGTCTCGCTGCTGTCGCAGACGTTCAGGCGTATGTCACGGCTGACTTGCGGCACCATCCAGCCGACGAACAT CGGCGGGCTTCAAATGTGGCGCTAATCGACGTCGCGCATTGGGCAAGCGAATTCCCGTGGTGCGGTCAGGCTGCTGACGT GCTGCGATCCCATTTCGGTACAGCACTGTCGGTGCGGGTGTGCACTATCCGCACTGACCCGTGGAATCTAGGCGCAAGAA GAGTGAATGATGTGAGCGATAGTGGGAGAGATCAGTAA
Upstream 100 bases:
>100_bases TCGGCTAGCGGTATCTGAGTCCGGCAGTATGCTTGGAGTGGCCGCTGCTAGTCCAAGCTATTGCGTAGGTGATCGCCTGC GCGAATATTGGGAGGTGCCG
Downstream 100 bases:
>100_bases TGAAAGACGAAGTAAACAAGAACAACAACGTTTTCGCGGCCGGAGTTGTCGAAGTTGGATGATGAGTTGTCCCGGATCGC GCACCGGGCCAACTATTTAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 385; Mature: 384
Protein sequence:
>385_residues MSARLADVIEVLDHAYPPRFAQSWDSVGLVCGDPEDVLEAITIAVDATPAVIDEVPDSGLLLVHHPLLLHGVDTVAVSTP KGALVHRLIRSGRSLFTAHTNADSASPGVSDALAHVFGLTVDAVLEPLLGVASLDKWVIYVPLEHVAAVQAAVFEAGAGH IGDYSHCSWSVTGTGQFMPHDGASPVVGSIGAIERVAEDRVEVVAPARARAAVLSAMHAAHPYEEPAFDIFALVPPPGDV GLGRIGTLPRPESLSAFVARVGAALPQTSSGVRATGDPDMLVSRVAVCGGAGDSLLSLAAVADVQAYVTADLRHHPADEH RRASNVALIDVAHWASEFPWCGQAADVLRSHFGTALSVRVCTIRTDPWNLGARRVNDVSDSGRDQ
Sequences:
>Translated_385_residues MSARLADVIEVLDHAYPPRFAQSWDSVGLVCGDPEDVLEAITIAVDATPAVIDEVPDSGLLLVHHPLLLHGVDTVAVSTP KGALVHRLIRSGRSLFTAHTNADSASPGVSDALAHVFGLTVDAVLEPLLGVASLDKWVIYVPLEHVAAVQAAVFEAGAGH IGDYSHCSWSVTGTGQFMPHDGASPVVGSIGAIERVAEDRVEVVAPARARAAVLSAMHAAHPYEEPAFDIFALVPPPGDV GLGRIGTLPRPESLSAFVARVGAALPQTSSGVRATGDPDMLVSRVAVCGGAGDSLLSLAAVADVQAYVTADLRHHPADEH RRASNVALIDVAHWASEFPWCGQAADVLRSHFGTALSVRVCTIRTDPWNLGARRVNDVSDSGRDQ >Mature_384_residues SARLADVIEVLDHAYPPRFAQSWDSVGLVCGDPEDVLEAITIAVDATPAVIDEVPDSGLLLVHHPLLLHGVDTVAVSTPK GALVHRLIRSGRSLFTAHTNADSASPGVSDALAHVFGLTVDAVLEPLLGVASLDKWVIYVPLEHVAAVQAAVFEAGAGHI GDYSHCSWSVTGTGQFMPHDGASPVVGSIGAIERVAEDRVEVVAPARARAAVLSAMHAAHPYEEPAFDIFALVPPPGDVG LGRIGTLPRPESLSAFVARVGAALPQTSSGVRATGDPDMLVSRVAVCGGAGDSLLSLAAVADVQAYVTADLRHHPADEHR RASNVALIDVAHWASEFPWCGQAADVLRSHFGTALSVRVCTIRTDPWNLGARRVNDVSDSGRDQ
Specific function: Unknown
COG id: COG0327
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0135 (NIF3) family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1639_MYCLE (O69481)
Other databases:
- EMBL: AL023635 - EMBL: AL583922 - PIR: T44719 - RefSeq: NP_302129.1 - ProteinModelPortal: O69481 - SMR: O69481 - EnsemblBacteria: EBMYCT00000029297 - GeneID: 909868 - GenomeReviews: AL450380_GR - KEGG: mle:ML1639 - NMPDR: fig|272631.1.peg.1001 - Leproma: ML1639 - GeneTree: EBGT00050000016121 - HOGENOM: HBG554751 - OMA: KLVVFVP - ProtClustDB: CLSK791710 - BioCyc: MLEP272631:ML1639-MONOMER - InterPro: IPR002678 - InterPro: IPR017221 - PANTHER: PTHR13799 - PIRSF: PIRSF037489 - TIGRFAMs: TIGR00486
Pfam domain/function: PF01784 NIF3; SSF102705 interacting_NIF3
EC number: NA
Molecular weight: Translated: 40291; Mature: 40160
Theoretical pI: Translated: 5.16; Mature: 5.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSARLADVIEVLDHAYPPRFAQSWDSVGLVCGDPEDVLEAITIAVDATPAVIDEVPDSGL CCCHHHHHHHHHHCCCCCHHHHCCCCCCEEECCHHHHHHHHHHHCCCCHHHHHHCCCCCE LLVHHPLLLHGVDTVAVSTPKGALVHRLIRSGRSLFTAHTNADSASPGVSDALAHVFGLT EEEECHHHHHCCCEEEEECCCHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHH VDAVLEPLLGVASLDKWVIYVPLEHVAAVQAAVFEAGAGHIGDYSHCSWSVTGTGQFMPH HHHHHHHHHHHHHHCCEEEEECHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCC DGASPVVGSIGAIERVAEDRVEVVAPARARAAVLSAMHAAHPYEEPAFDIFALVPPPGDV CCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCC GLGRIGTLPRPESLSAFVARVGAALPQTSSGVRATGDPDMLVSRVAVCGGAGDSLLSLAA CCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHH VADVQAYVTADLRHHPADEHRRASNVALIDVAHWASEFPWCGQAADVLRSHFGTALSVRV HHHHHHHHHHHHHCCCCHHHHHHCCEEEEEEHHHHHCCCCCCHHHHHHHHHCCCEEEEEE CTIRTDPWNLGARRVNDVSDSGRDQ EEEECCCCCCCCHHHCCCCCCCCCC >Mature Secondary Structure SARLADVIEVLDHAYPPRFAQSWDSVGLVCGDPEDVLEAITIAVDATPAVIDEVPDSGL CCHHHHHHHHHHCCCCCHHHHCCCCCCEEECCHHHHHHHHHHHCCCCHHHHHHCCCCCE LLVHHPLLLHGVDTVAVSTPKGALVHRLIRSGRSLFTAHTNADSASPGVSDALAHVFGLT EEEECHHHHHCCCEEEEECCCHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHH VDAVLEPLLGVASLDKWVIYVPLEHVAAVQAAVFEAGAGHIGDYSHCSWSVTGTGQFMPH HHHHHHHHHHHHHHCCEEEEECHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCC DGASPVVGSIGAIERVAEDRVEVVAPARARAAVLSAMHAAHPYEEPAFDIFALVPPPGDV CCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCC GLGRIGTLPRPESLSAFVARVGAALPQTSSGVRATGDPDMLVSRVAVCGGAGDSLLSLAA CCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHH VADVQAYVTADLRHHPADEHRRASNVALIDVAHWASEFPWCGQAADVLRSHFGTALSVRV HHHHHHHHHHHHHCCCCHHHHHHCCEEEEEEHHHHHCCCCCCHHHHHHHHHCCCEEEEEE CTIRTDPWNLGARRVNDVSDSGRDQ EEEECCCCCCCCHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11234002