| Definition | Mycobacterium leprae Br4923 chromosome, complete genome. |
|---|---|
| Accession | NC_011896 |
| Length | 3,268,071 |
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The map label for this gene is 221230342
Identifier: 221230342
GI number: 221230342
Start: 1975048
End: 1975746
Strand: Reverse
Name: 221230342
Synonym: MLBr_01638
Alternate gene names: NA
Gene position: 1975746-1975048 (Counterclockwise)
Preceding gene: 221230343
Following gene: 221230341
Centisome position: 60.46
GC content: 59.08
Gene sequence:
>699_bases TTGTCGAAGTTGGATGATGAGTTGTCCCGGATCGCGCACCGGGCCAACTATTTACCGCAGCGGGAGGCCTACGAGCGGAT GCGGGTCGAGCGCACCGGCGCCAATGATCGGCTGGTAGCTGTGCAAATTGCGTTGGAGGACGTAGATACCCAGGTGTTTC TACTCGAGTCGGAGATCGACGCGATGCGACAGCGTGAAGACCGGGATCGGTTGCTGCTCAATTCGGGGGCAACGGACGCT AAGCAGTTGTCTGATCTGCAACCCGAATTTGGGACCTGGCAACGCCGTAAGAACAGCCTGGAAGATTCCCTGCGGGAGGT TATGAAGCGCCGCGGAGAGCTGCAGGACCAGCTGACTGCAGAGCTAGGGGCAATCGAGAGGATGCAGACCGACCTGGTCG GTGCTCGCCAGACTCTTGACGTTGCCTTTGCTGAGATCGACCAAGTTGGCCAGCCGCATTCCTCACAATGCGATGTGCTG ATCGCGGAACTGGCCCCTGCTCTCTCCGCGCCTTACGAACGACTGTGTGCTGGGGGTGGGTTGGGTGTCGGGCAATTGCA GGGACACCGTTGCGGAGCCTGTCGAAGCGAGATCGGCCGCGGAGAGCTGTCTTGCATCTCGGTGGACGTCGACGACGAAG TAGTGAAGTACCCGGAATCTGGAGCTATCCAGTTGCTGGACAAAGGATTTTTCCAGTGA
Upstream 100 bases:
>100_bases GAATCTAGGCGCAAGAAGAGTGAATGATGTGAGCGATAGTGGGAGAGATCAGTAATGAAAGACGAAGTAAACAAGAACAA CAACGTTTTCGCGGCCGGAG
Downstream 100 bases:
>100_bases AAGTTATCATCGAGGCTGACGGTGGGTCGAGAGGAAACCCCGGACCAGCCGGATATGGCGCAGTGGTGTGGATAGCTGAC CGTTCGGCTGTGCTGACGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 232; Mature: 231
Protein sequence:
>232_residues MSKLDDELSRIAHRANYLPQREAYERMRVERTGANDRLVAVQIALEDVDTQVFLLESEIDAMRQREDRDRLLLNSGATDA KQLSDLQPEFGTWQRRKNSLEDSLREVMKRRGELQDQLTAELGAIERMQTDLVGARQTLDVAFAEIDQVGQPHSSQCDVL IAELAPALSAPYERLCAGGGLGVGQLQGHRCGACRSEIGRGELSCISVDVDDEVVKYPESGAIQLLDKGFFQ
Sequences:
>Translated_232_residues MSKLDDELSRIAHRANYLPQREAYERMRVERTGANDRLVAVQIALEDVDTQVFLLESEIDAMRQREDRDRLLLNSGATDA KQLSDLQPEFGTWQRRKNSLEDSLREVMKRRGELQDQLTAELGAIERMQTDLVGARQTLDVAFAEIDQVGQPHSSQCDVL IAELAPALSAPYERLCAGGGLGVGQLQGHRCGACRSEIGRGELSCISVDVDDEVVKYPESGAIQLLDKGFFQ >Mature_231_residues SKLDDELSRIAHRANYLPQREAYERMRVERTGANDRLVAVQIALEDVDTQVFLLESEIDAMRQREDRDRLLLNSGATDAK QLSDLQPEFGTWQRRKNSLEDSLREVMKRRGELQDQLTAELGAIERMQTDLVGARQTLDVAFAEIDQVGQPHSSQCDVLI AELAPALSAPYERLCAGGGLGVGQLQGHRCGACRSEIGRGELSCISVDVDDEVVKYPESGAIQLLDKGFFQ
Specific function: Unknown
COG id: COG1579
COG function: function code R; Zn-ribbon protein, possibly nucleic acid-binding
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1638_MYCLE (Q9CBS9)
Other databases:
- EMBL: AL583922 - EMBL: AL023635 - PIR: H87113 - PIR: T44720 - RefSeq: NP_302128.1 - EnsemblBacteria: EBMYCT00000029203 - GeneID: 909867 - GenomeReviews: AL450380_GR - KEGG: mle:ML1638 - NMPDR: fig|272631.1.peg.1000 - Leproma: ML1638 - GeneTree: EBGT00050000017625 - HOGENOM: HBG292563 - OMA: VVRCEEC - ProtClustDB: CLSK2460557 - BioCyc: MLEP272631:ML1638-MONOMER - InterPro: IPR003743
Pfam domain/function: PF02591 DUF164
EC number: NA
Molecular weight: Translated: 25860; Mature: 25729
Theoretical pI: Translated: 4.50; Mature: 4.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKLDDELSRIAHRANYLPQREAYERMRVERTGANDRLVAVQIALEDVDTQVFLLESEID CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCEEEEEHHHHH AMRQREDRDRLLLNSGATDAKQLSDLQPEFGTWQRRKNSLEDSLREVMKRRGELQDQLTA HHHHHHHHHHEEECCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHH ELGAIERMQTDLVGARQTLDVAFAEIDQVGQPHSSQCDVLIAELAPALSAPYERLCAGGG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHCCCC LGVGQLQGHRCGACRSEIGRGELSCISVDVDDEVVKYPESGAIQLLDKGFFQ CCCCCCCCCCCCHHHHHCCCCCEEEEEECCCHHHHHCCCCCHHHHHHCCCCC >Mature Secondary Structure SKLDDELSRIAHRANYLPQREAYERMRVERTGANDRLVAVQIALEDVDTQVFLLESEID CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCEEEEEHHHHH AMRQREDRDRLLLNSGATDAKQLSDLQPEFGTWQRRKNSLEDSLREVMKRRGELQDQLTA HHHHHHHHHHEEECCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHH ELGAIERMQTDLVGARQTLDVAFAEIDQVGQPHSSQCDVLIAELAPALSAPYERLCAGGG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHCCCC LGVGQLQGHRCGACRSEIGRGELSCISVDVDDEVVKYPESGAIQLLDKGFFQ CCCCCCCCCCCCHHHHHCCCCCEEEEEECCCHHHHHCCCCCHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11234002