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The map label for this gene is rbfA

Identifier: 221230294

GI number: 221230294

Start: 1879594

End: 1880088

Strand: Reverse

Name: rbfA

Synonym: MLBr_01555

Alternate gene names: 221230294

Gene position: 1880088-1879594 (Counterclockwise)

Preceding gene: 221230295

Following gene: 221230292

Centisome position: 57.53

GC content: 63.43

Gene sequence:

>495_bases
ATGGCTGATCAGGCTCGTGCGCGTCGGCTGGCCAAGCGGATCTGCACGATCGTTGCCTCGGCCATCGAGTTCGAGATCAA
GGATCCGGGGTTGGACGGGGTGACCATCGTCGATGTGAAGGTGACCGCTGACTTGCATGACGCCACAGTGTTTTACACAG
TGATGGGTCGCACGCTGGAGGATGCGCCCGACTACACTGCCGCCACCGCTGCGCTGAACCGGGCCAAGGGCACGCTGCGT
AGCAAGGTCGGGGCGGGTACTGGTGTGCGCTTCACTCCGACTCTGACGTTCATTCGGGACACGACGTCTGACAGTGTGGC
GCGGATGGAAGAGTTGTTGGCCCGCGCCCGCGCTGCGGATGCCGATGTGGCGCAGGTCCGCCTACGTGCCAAGCCGGCGG
GGGAGGCCGATCCGTATCGTGACAAGGGGTCAGTGGCGGGACTGGTCGGGGTCGATATCGCGGACATTGATGACGACGAT
CTAACCGATGACTGA

Upstream 100 bases:

>100_bases
GAGTGCGGTATGACGTTGGGTTACTCGGATATCAAGGAGGGTGATGTTATTGAGTCCTACGAGTTGGTAGAGAAACAACG
TGCGTAGGAGGGCGTTCTTA

Downstream 100 bases:

>100_bases
GCCGGTCGGTGCTTCGCTCACGCGGGCTCCTGTGGACGCTGTCGTCGAAGCCAAGTTGTTGTCGTCCGCGACGACGATCG
GACACGGTCACATTCCATGC

Product: ribosome-binding factor A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 164; Mature: 163

Protein sequence:

>164_residues
MADQARARRLAKRICTIVASAIEFEIKDPGLDGVTIVDVKVTADLHDATVFYTVMGRTLEDAPDYTAATAALNRAKGTLR
SKVGAGTGVRFTPTLTFIRDTTSDSVARMEELLARARAADADVAQVRLRAKPAGEADPYRDKGSVAGLVGVDIADIDDDD
LTDD

Sequences:

>Translated_164_residues
MADQARARRLAKRICTIVASAIEFEIKDPGLDGVTIVDVKVTADLHDATVFYTVMGRTLEDAPDYTAATAALNRAKGTLR
SKVGAGTGVRFTPTLTFIRDTTSDSVARMEELLARARAADADVAQVRLRAKPAGEADPYRDKGSVAGLVGVDIADIDDDD
LTDD
>Mature_163_residues
ADQARARRLAKRICTIVASAIEFEIKDPGLDGVTIVDVKVTADLHDATVFYTVMGRTLEDAPDYTAATAALNRAKGTLRS
KVGAGTGVRFTPTLTFIRDTTSDSVARMEELLARARAADADVAQVRLRAKPAGEADPYRDKGSVAGLVGVDIADIDDDDL
TDD

Specific function: Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Essential for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA

COG id: COG0858

COG function: function code J; Ribosome-binding factor A

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rbfA family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RBFA_MYCLB (B8ZRT3)

Other databases:

- EMBL:   FM211192
- RefSeq:   YP_002503710.1
- ProteinModelPortal:   B8ZRT3
- SMR:   B8ZRT3
- EnsemblBacteria:   EBMYCT00000085568
- GeneID:   7325734
- GenomeReviews:   FM211192_GR
- GeneTree:   EBGT00050000017622
- HOGENOM:   HBG751055
- OMA:   TGDLHDA
- ProtClustDB:   PRK00521
- GO:   GO:0005737
- HAMAP:   MF_00003
- InterPro:   IPR015946
- InterPro:   IPR000238
- InterPro:   IPR020053
- Gene3D:   G3DSA:3.30.300.20
- ProDom:   PD007327
- TIGRFAMs:   TIGR00082

Pfam domain/function: PF02033 RBFA; SSF89919 Rib_bd_factA

EC number: NA

Molecular weight: Translated: 17483; Mature: 17352

Theoretical pI: Translated: 4.62; Mature: 4.62

Prosite motif: PS01319 RBFA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADQARARRLAKRICTIVASAIEFEIKDPGLDGVTIVDVKVTADLHDATVFYTVMGRTLE
CCCHHHHHHHHHHHHHHHHHHHHEEECCCCCCCEEEEEEEEECCCCCCEEEEEECCCHHH
DAPDYTAATAALNRAKGTLRSKVGAGTGVRFTPTLTFIRDTTSDSVARMEELLARARAAD
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCEECCEEEEEECCCCHHHHHHHHHHHHHHCCC
ADVAQVRLRAKPAGEADPYRDKGSVAGLVGVDIADIDDDDLTDD
CCHHHEEEECCCCCCCCCCCCCCCEEEEEECEEECCCCCCCCCC
>Mature Secondary Structure 
ADQARARRLAKRICTIVASAIEFEIKDPGLDGVTIVDVKVTADLHDATVFYTVMGRTLE
CCHHHHHHHHHHHHHHHHHHHHEEECCCCCCCEEEEEEEEECCCCCCEEEEEECCCHHH
DAPDYTAATAALNRAKGTLRSKVGAGTGVRFTPTLTFIRDTTSDSVARMEELLARARAAD
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCEECCEEEEEECCCCHHHHHHHHHHHHHHCCC
ADVAQVRLRAKPAGEADPYRDKGSVAGLVGVDIADIDDDDLTDD
CCHHHEEEECCCCCCCCCCCCCCCEEEEEECEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA