| Definition | Mycobacterium leprae Br4923 chromosome, complete genome. |
|---|---|
| Accession | NC_011896 |
| Length | 3,268,071 |
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The map label for this gene is eccB5 [H]
Identifier: 221230289
GI number: 221230289
Start: 1866294
End: 1867814
Strand: Reverse
Name: eccB5 [H]
Synonym: MLBr_01544
Alternate gene names: 221230289
Gene position: 1867814-1866294 (Counterclockwise)
Preceding gene: 221230290
Following gene: 221230288
Centisome position: 57.15
GC content: 59.83
Gene sequence:
>1521_bases GTGGCCGAAGAGAGCAGCGGGCGGCGGGGGTCGGAGTACGGCCTTGGTTTGTCAACACGGACTCAGGTGACGGGTTATCA GTTCCTTGCCCGCCGAACCGCAATGGCGTTGACGCGGTGGCGCGTCCGCATGGAGGTCGAACCAGGTCGCCGCCAGACGT TAGCGGTGGTGGCGTCGGTTTCCGCGGCATTGTTGGGTTGCCTGGGAGCGCTGCTGTGGTCGTTTATAAGCCCATCCGGC CAGCTGAATGAGTCGCCTATCATCATTGACCGTGACTCTGGCGCGCTGTACGTCCGGGTAGGGGATAGGTTGTACCCCGC TTTGAATCTGGCGTCCGCACGGCTGATCACCGGACGACCGGACAATCCGCACGCGGTTCGGTCCAGCCAAATCGCCACGC TACCGCACGGACCGCTGGTGGGCATCCCAGGCGCACCGTCGGAGTTATCACCTGAAACTCCACAGACATCATCATGGCTG GTGTGCGATACGGTGGCCACCTCGACCGGGATTGGGTCGTCGTCTGGGGTGACGGTCACAGTGATCGACGGATCCCCAGA CCTGTCTGGCCACCGTCGGGTGCTGACCGGCTCGGATGCGGTAGTGCTGCACTACGGTGGGGATGCGTGGGTCATCCGGC AGGGACGCCGGTCCCGTATCGACGCCATGAACCGGTCGGTGCTGTTGCCATTGGGCTTGACCCCAGAGCAAGTCAGTCAA GCGCGCCCGATGAGTCGTGCGTTGTTCGATGCTTTGCCGGTGGGTCCCGACTTGGTGGTGCCAGACGTACCAAACGAGGG CAATCCGGCCTCTTTTCCGGGTGCTCCGGGACCGGTGGGTACGGTGATTGTCACACCACAGATCAGTGGTCCGCAACAGT ATTCGCTGGTGTTGGCTGACGGCGTGGAGACGGTCTCCCCACTGGTGGCTCAGATCATGCAAAACGCAGGTAAACCAGGA AACACCAAACTAATCACCGTAGCACCGTCTGTGTTGGTAAAGATGCCGGTGGTCAATAAGCTGGATTTGTCTGTTTACCC CGACACCCCGTTGCAAGTGGTGGACCTCCGAGAGAATCCGTCGACCTGTTGGTGGTGGGAACGGACCGCTGGTGAGAGCC GGTCTCGTATCCAGGTGATAACTGGGTCAACCATTCCAATTAACTCAGCCGATGTGAAGAAGGTGGTGTCGTTGGTGAAG GCGGACACAACTGGACGCGAAGCTGATCAAGTCTACTTCGGTTCTAACTATGCCAACTTCGTTGCAGTCACCGGCAACAA TCCAGCGGCACAAACAACGGAATCACTGTGGTGGGTCACGCGGACGGGAGCTCGGTTTGGAGTGGAAGACACCAAGGACG TTCGTGACGCATTAGGTTTGAACGGCACGCCCAATTTGGCGCCCTGGGTAGCCTTGCGGCTATTGTCGCAAGGCCCGACT CTGTCCCGAGCAGATGCATTGATGGAGCACGACACGCTACCTATGGACATGACCCCTGCCGAGTTGGTGGTACCTAAGTG A
Upstream 100 bases:
>100_bases GGTAAATACAGGTGATTTACGGTTATCGATAATGAGCAGTGCATAGCTTTTAAAGCCATGTCAATATACGGGAGTTTTTT AGACCGGAAGGTGATCTAAC
Downstream 100 bases:
>100_bases AACGTGGCTTTGCACGCCCGACGCCGGAAAAGGCTCCGGTTATCAGGCCGGAAAACATTGTCCTGCCAACACCTTTGAGT ATTCCGCCACCAGAGGGCAA
Product: hypothetical protein
Products: NA
Alternate protein names: ESX conserved component B5; Type VII secretion system protein eccB5; T7SS protein eccB5 [H]
Number of amino acids: Translated: 506; Mature: 505
Protein sequence:
>506_residues MAEESSGRRGSEYGLGLSTRTQVTGYQFLARRTAMALTRWRVRMEVEPGRRQTLAVVASVSAALLGCLGALLWSFISPSG QLNESPIIIDRDSGALYVRVGDRLYPALNLASARLITGRPDNPHAVRSSQIATLPHGPLVGIPGAPSELSPETPQTSSWL VCDTVATSTGIGSSSGVTVTVIDGSPDLSGHRRVLTGSDAVVLHYGGDAWVIRQGRRSRIDAMNRSVLLPLGLTPEQVSQ ARPMSRALFDALPVGPDLVVPDVPNEGNPASFPGAPGPVGTVIVTPQISGPQQYSLVLADGVETVSPLVAQIMQNAGKPG NTKLITVAPSVLVKMPVVNKLDLSVYPDTPLQVVDLRENPSTCWWWERTAGESRSRIQVITGSTIPINSADVKKVVSLVK ADTTGREADQVYFGSNYANFVAVTGNNPAAQTTESLWWVTRTGARFGVEDTKDVRDALGLNGTPNLAPWVALRLLSQGPT LSRADALMEHDTLPMDMTPAELVVPK
Sequences:
>Translated_506_residues MAEESSGRRGSEYGLGLSTRTQVTGYQFLARRTAMALTRWRVRMEVEPGRRQTLAVVASVSAALLGCLGALLWSFISPSG QLNESPIIIDRDSGALYVRVGDRLYPALNLASARLITGRPDNPHAVRSSQIATLPHGPLVGIPGAPSELSPETPQTSSWL VCDTVATSTGIGSSSGVTVTVIDGSPDLSGHRRVLTGSDAVVLHYGGDAWVIRQGRRSRIDAMNRSVLLPLGLTPEQVSQ ARPMSRALFDALPVGPDLVVPDVPNEGNPASFPGAPGPVGTVIVTPQISGPQQYSLVLADGVETVSPLVAQIMQNAGKPG NTKLITVAPSVLVKMPVVNKLDLSVYPDTPLQVVDLRENPSTCWWWERTAGESRSRIQVITGSTIPINSADVKKVVSLVK ADTTGREADQVYFGSNYANFVAVTGNNPAAQTTESLWWVTRTGARFGVEDTKDVRDALGLNGTPNLAPWVALRLLSQGPT LSRADALMEHDTLPMDMTPAELVVPK >Mature_505_residues AEESSGRRGSEYGLGLSTRTQVTGYQFLARRTAMALTRWRVRMEVEPGRRQTLAVVASVSAALLGCLGALLWSFISPSGQ LNESPIIIDRDSGALYVRVGDRLYPALNLASARLITGRPDNPHAVRSSQIATLPHGPLVGIPGAPSELSPETPQTSSWLV CDTVATSTGIGSSSGVTVTVIDGSPDLSGHRRVLTGSDAVVLHYGGDAWVIRQGRRSRIDAMNRSVLLPLGLTPEQVSQA RPMSRALFDALPVGPDLVVPDVPNEGNPASFPGAPGPVGTVIVTPQISGPQQYSLVLADGVETVSPLVAQIMQNAGKPGN TKLITVAPSVLVKMPVVNKLDLSVYPDTPLQVVDLRENPSTCWWWERTAGESRSRIQVITGSTIPINSADVKKVVSLVKA DTTGREADQVYFGSNYANFVAVTGNNPAAQTTESLWWVTRTGARFGVEDTKDVRDALGLNGTPNLAPWVALRLLSQGPTL SRADALMEHDTLPMDMTPAELVVPK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the eccB family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007795 [H]
Pfam domain/function: PF05108 DUF690 [H]
EC number: NA
Molecular weight: Translated: 53882; Mature: 53751
Theoretical pI: Translated: 7.05; Mature: 7.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEESSGRRGSEYGLGLSTRTQVTGYQFLARRTAMALTRWRVRMEVEPGRRQTLAVVASV CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHEEEEEEEEECCCCCHHHHHHHHH SAALLGCLGALLWSFISPSGQLNESPIIIDRDSGALYVRVGDRLYPALNLASARLITGRP HHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCEEEEEECCCCCCHHHHCCEEEEECCC DNPHAVRSSQIATLPHGPLVGIPGAPSELSPETPQTSSWLVCDTVATSTGIGSSSGVTVT CCCCCCCCCEEEECCCCCEEECCCCCCCCCCCCCCCCCEEEEEEHHHCCCCCCCCCEEEE VIDGSPDLSGHRRVLTGSDAVVLHYGGDAWVIRQGRRSRIDAMNRSVLLPLGLTPEQVSQ EECCCCCCCCCEEEEECCCEEEEEECCCEEEEECCCHHHHHHCCCCEEEECCCCHHHHHH ARPMSRALFDALPVGPDLVVPDVPNEGNPASFPGAPGPVGTVIVTPQISGPQQYSLVLAD CCHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEEEC GVETVSPLVAQIMQNAGKPGNTKLITVAPSVLVKMPVVNKLDLSVYPDTPLQVVDLRENP CHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEECCCCCEEEEEECCCCCEEEEEECCCC STCWWWERTAGESRSRIQVITGSTIPINSADVKKVVSLVKADTTGREADQVYFGSNYANF CEEEEEECCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEECCCCEEE VAVTGNNPAAQTTESLWWVTRTGARFGVEDTKDVRDALGLNGTPNLAPWVALRLLSQGPT EEEECCCCCCCCHHHEEEEEECCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHCCCC LSRADALMEHDTLPMDMTPAELVVPK HHHHHHHHHCCCCCCCCCCHHEECCC >Mature Secondary Structure AEESSGRRGSEYGLGLSTRTQVTGYQFLARRTAMALTRWRVRMEVEPGRRQTLAVVASV CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHEEEEEEEEECCCCCHHHHHHHHH SAALLGCLGALLWSFISPSGQLNESPIIIDRDSGALYVRVGDRLYPALNLASARLITGRP HHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCEEEEEECCCCCCHHHHCCEEEEECCC DNPHAVRSSQIATLPHGPLVGIPGAPSELSPETPQTSSWLVCDTVATSTGIGSSSGVTVT CCCCCCCCCEEEECCCCCEEECCCCCCCCCCCCCCCCCEEEEEEHHHCCCCCCCCCEEEE VIDGSPDLSGHRRVLTGSDAVVLHYGGDAWVIRQGRRSRIDAMNRSVLLPLGLTPEQVSQ EECCCCCCCCCEEEEECCCEEEEEECCCEEEEECCCHHHHHHCCCCEEEECCCCHHHHHH ARPMSRALFDALPVGPDLVVPDVPNEGNPASFPGAPGPVGTVIVTPQISGPQQYSLVLAD CCHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEEEC GVETVSPLVAQIMQNAGKPGNTKLITVAPSVLVKMPVVNKLDLSVYPDTPLQVVDLRENP CHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEECCCCCEEEEEECCCCCEEEEEECCCC STCWWWERTAGESRSRIQVITGSTIPINSADVKKVVSLVKADTTGREADQVYFGSNYANF CEEEEEECCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEECCCCEEE VAVTGNNPAAQTTESLWWVTRTGARFGVEDTKDVRDALGLNGTPNLAPWVALRLLSQGPT EEEECCCCCCCCHHHEEEEEECCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHCCCC LSRADALMEHDTLPMDMTPAELVVPK HHHHHHHHHCCCCCCCCCCHHEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]