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The map label for this gene is eccD5 [H]

Identifier: 221230286

GI number: 221230286

Start: 1856445

End: 1857956

Strand: Reverse

Name: eccD5 [H]

Synonym: MLBr_01539

Alternate gene names: 221230286

Gene position: 1857956-1856445 (Counterclockwise)

Preceding gene: 221230287

Following gene: 221230285

Centisome position: 56.85

GC content: 60.58

Gene sequence:

>1512_bases
ATGACGGCGGTAGCTGACGCGCCACGGACCGACATCGAGGGCACATCGTCACCCCGAGTGGTCGTAGTTGGAATCGTGGC
TGGCGAGGGGGCCCAGATCAGCGTTTTGCTTGATGCCAACGCCCCGGTGTCAGTGATGACCGACCCACTGCTCAAAGTAA
TAAACAGTCGACTGTGTGAGCTTGGCGAAGGAACGCTTGAGCCTACCGGGCGCGGCAGATGGGCACTGTGCCTGATTGAC
GGCACCCCGTTGTGGCCCACCCAGTCGTTGACCGAGCAAGATGTCTACGACGGCGACCGATTGTGGATTCGGTTCATCGC
CGACACCGAGCGTCGATCGCAGGTGATCGAGCATATCTCTACTGCGGTTTCGGCAAATCTCAGCAAGCGGTTCGCCGCGA
TAGACTCGATCGTTGCTGTGCAGGTCGGCGCGTTGATGGTGGCAACAGGTGTGTTGGCTTCGTCAGTTTTGTTGGTCTGG
TGGCGTTGGCACCACGGTTTTTGGCTTTCGGTCATCTACGCCACAGTGATTGCGTTGCTGATATTGGTGATGTCCACGTT
GGTGCTGATGCGGGCCACTACCCGGGAAGATCGACGCGCCGGTGACATCATGCTGCTGAGTGGGATTGCGCCAGTGACTG
CGGCCGCAGCGGCCGCGCCACCTGGTCCGTTGGGGTCCCCGCACGCGGTGATGGGTTTCGGGGTGTTCGCGATTGCCGCG
ATGTTGGCCTTGCGATTCACCGGTCGTCAACTCAGTATTTACACTGCGATGATCACCATTTCCGTGGTGGTGGCGATCGC
GAGCCTGGCACGGATGGTCGCGATGACCAGCGCGGTGACGCTGCTTTCCTGCGTAATGCTGGCCTGCGTGCTGCTCTACC
ATTGCGCACCAGCTCTGTCCCGCCGTTTGGCCGGCATTCGGCTACCGGTGTTTCCATCGGCCACCAGCCGGTGGGTGTTT
GAAGCGCGACCCGATTTGCCTAACACGGTGGTGCGCTCCGACGGAGGCCCGCCGGTCTTGGAGGGGCCGGCGTCGGTGCG
CGATGTGCTGCTGCAATCCGAACGTGCCCGGTCTTATTTATCGGGTTTACTCCTGGGGCTGGGCGTGTTGCTGGTGGTTT
CACTTACCGCATTGAGCAACCCCCACGTCGGGCAGCGTTGGCTGCCGCTGTTGCTAGCTGGGTTTACCTCCGGTTTCCTA
CTATTGCGGGGCCGCTCGTATGTCGACCGCTGGCAAGCAATCACGTTGGCTGCGACTGCGGTACTCATCGTTGCTGCGGT
GGTGGTGCGGTACGCGCTGGTTTTGTCGTCGCCGTTGGCGGTATCGATCGGGGCGGCAATCTTGGTTCTGCTGCCTGCTG
CAGGGCTGATAGCTGCGGCGGTCGTGCCTAACACGATCTATAGCCCGCTGTTCCGCAAGCTTGTGGAATGGATCGAATAC
TTGTGCCTGGTACCTATTTTCCCCCTGGCATTGTGGTTGATGGATGTCTATACCGCGATCCGGTACCGGTAG

Upstream 100 bases:

>100_bases
TCCCAGGGAGCCACGGGGCTTTAGCTTGTGCAGGTGCGCCACCCCCGCGCGACCATGATGTGCGGGATACTACATTCACC
ACACCAGGGGGTGCAGAACG

Downstream 100 bases:

>100_bases
TAAGAGGGCGCGAGGCGGTTGCTCGTCTCGCGTGTTCGTCGCACTAGCGTTACTTACCTCGGGAGCATTTGCTGGCCTGC
CACCAGCGTATGCGATTTCA

Product: hypothetical protein

Products: NA

Alternate protein names: ESX conserved component D5; Type VII secretion system protein eccD5; T7SS protein eccD5 [H]

Number of amino acids: Translated: 503; Mature: 502

Protein sequence:

>503_residues
MTAVADAPRTDIEGTSSPRVVVVGIVAGEGAQISVLLDANAPVSVMTDPLLKVINSRLCELGEGTLEPTGRGRWALCLID
GTPLWPTQSLTEQDVYDGDRLWIRFIADTERRSQVIEHISTAVSANLSKRFAAIDSIVAVQVGALMVATGVLASSVLLVW
WRWHHGFWLSVIYATVIALLILVMSTLVLMRATTREDRRAGDIMLLSGIAPVTAAAAAAPPGPLGSPHAVMGFGVFAIAA
MLALRFTGRQLSIYTAMITISVVVAIASLARMVAMTSAVTLLSCVMLACVLLYHCAPALSRRLAGIRLPVFPSATSRWVF
EARPDLPNTVVRSDGGPPVLEGPASVRDVLLQSERARSYLSGLLLGLGVLLVVSLTALSNPHVGQRWLPLLLAGFTSGFL
LLRGRSYVDRWQAITLAATAVLIVAAVVVRYALVLSSPLAVSIGAAILVLLPAAGLIAAAVVPNTIYSPLFRKLVEWIEY
LCLVPIFPLALWLMDVYTAIRYR

Sequences:

>Translated_503_residues
MTAVADAPRTDIEGTSSPRVVVVGIVAGEGAQISVLLDANAPVSVMTDPLLKVINSRLCELGEGTLEPTGRGRWALCLID
GTPLWPTQSLTEQDVYDGDRLWIRFIADTERRSQVIEHISTAVSANLSKRFAAIDSIVAVQVGALMVATGVLASSVLLVW
WRWHHGFWLSVIYATVIALLILVMSTLVLMRATTREDRRAGDIMLLSGIAPVTAAAAAAPPGPLGSPHAVMGFGVFAIAA
MLALRFTGRQLSIYTAMITISVVVAIASLARMVAMTSAVTLLSCVMLACVLLYHCAPALSRRLAGIRLPVFPSATSRWVF
EARPDLPNTVVRSDGGPPVLEGPASVRDVLLQSERARSYLSGLLLGLGVLLVVSLTALSNPHVGQRWLPLLLAGFTSGFL
LLRGRSYVDRWQAITLAATAVLIVAAVVVRYALVLSSPLAVSIGAAILVLLPAAGLIAAAVVPNTIYSPLFRKLVEWIEY
LCLVPIFPLALWLMDVYTAIRYR
>Mature_502_residues
TAVADAPRTDIEGTSSPRVVVVGIVAGEGAQISVLLDANAPVSVMTDPLLKVINSRLCELGEGTLEPTGRGRWALCLIDG
TPLWPTQSLTEQDVYDGDRLWIRFIADTERRSQVIEHISTAVSANLSKRFAAIDSIVAVQVGALMVATGVLASSVLLVWW
RWHHGFWLSVIYATVIALLILVMSTLVLMRATTREDRRAGDIMLLSGIAPVTAAAAAAPPGPLGSPHAVMGFGVFAIAAM
LALRFTGRQLSIYTAMITISVVVAIASLARMVAMTSAVTLLSCVMLACVLLYHCAPALSRRLAGIRLPVFPSATSRWVFE
ARPDLPNTVVRSDGGPPVLEGPASVRDVLLQSERARSYLSGLLLGLGVLLVVSLTALSNPHVGQRWLPLLLAGFTSGFLL
LRGRSYVDRWQAITLAATAVLIVAAVVVRYALVLSSPLAVSIGAAILVLLPAAGLIAAAVVPNTIYSPLFRKLVEWIEYL
CLVPIFPLALWLMDVYTAIRYR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the eccD/snm4 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006707 [H]

Pfam domain/function: PF04600 DUF571 [H]

EC number: NA

Molecular weight: Translated: 53780; Mature: 53649

Theoretical pI: Translated: 9.18; Mature: 9.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAVADAPRTDIEGTSSPRVVVVGIVAGEGAQISVLLDANAPVSVMTDPLLKVINSRLCE
CCCCCCCCCCCCCCCCCCCEEEEEEEECCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHH
LGEGTLEPTGRGRWALCLIDGTPLWPTQSLTEQDVYDGDRLWIRFIADTERRSQVIEHIS
CCCCCCCCCCCCCEEEEEEECCCCCCCCCCCHHCCCCCCCEEEEEECCCHHHHHHHHHHH
TAVSANLSKRFAAIDSIVAVQVGALMVATGVLASSVLLVWWRWHHGFWLSVIYATVIALL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
ILVMSTLVLMRATTREDRRAGDIMLLSGIAPVTAAAAAAPPGPLGSPHAVMGFGVFAIAA
HHHHHHHHHHHHHCHHHHCCCCEEEECCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH
MLALRFTGRQLSIYTAMITISVVVAIASLARMVAMTSAVTLLSCVMLACVLLYHCAPALS
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RRLAGIRLPVFPSATSRWVFEARPDLPNTVVRSDGGPPVLEGPASVRDVLLQSERARSYL
HHHCCCCCCCCCCCCCCEEEECCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
SGLLLGLGVLLVVSLTALSNPHVGQRWLPLLLAGFTSGFLLLRGRSYVDRWQAITLAATA
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHH
VLIVAAVVVRYALVLSSPLAVSIGAAILVLLPAAGLIAAAVVPNTIYSPLFRKLVEWIEY
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
LCLVPIFPLALWLMDVYTAIRYR
HHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TAVADAPRTDIEGTSSPRVVVVGIVAGEGAQISVLLDANAPVSVMTDPLLKVINSRLCE
CCCCCCCCCCCCCCCCCCEEEEEEEECCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHH
LGEGTLEPTGRGRWALCLIDGTPLWPTQSLTEQDVYDGDRLWIRFIADTERRSQVIEHIS
CCCCCCCCCCCCCEEEEEEECCCCCCCCCCCHHCCCCCCCEEEEEECCCHHHHHHHHHHH
TAVSANLSKRFAAIDSIVAVQVGALMVATGVLASSVLLVWWRWHHGFWLSVIYATVIALL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
ILVMSTLVLMRATTREDRRAGDIMLLSGIAPVTAAAAAAPPGPLGSPHAVMGFGVFAIAA
HHHHHHHHHHHHHCHHHHCCCCEEEECCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH
MLALRFTGRQLSIYTAMITISVVVAIASLARMVAMTSAVTLLSCVMLACVLLYHCAPALS
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RRLAGIRLPVFPSATSRWVFEARPDLPNTVVRSDGGPPVLEGPASVRDVLLQSERARSYL
HHHCCCCCCCCCCCCCCEEEECCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
SGLLLGLGVLLVVSLTALSNPHVGQRWLPLLLAGFTSGFLLLRGRSYVDRWQAITLAATA
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHH
VLIVAAVVVRYALVLSSPLAVSIGAAILVLLPAAGLIAAAVVPNTIYSPLFRKLVEWIEY
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
LCLVPIFPLALWLMDVYTAIRYR
HHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]