| Definition | Mycobacterium leprae Br4923 chromosome, complete genome. |
|---|---|
| Accession | NC_011896 |
| Length | 3,268,071 |
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The map label for this gene is 221230175
Identifier: 221230175
GI number: 221230175
Start: 1598315
End: 1599121
Strand: Reverse
Name: 221230175
Synonym: MLBr_01340
Alternate gene names: NA
Gene position: 1599121-1598315 (Counterclockwise)
Preceding gene: 221230176
Following gene: 221230174
Centisome position: 48.93
GC content: 62.95
Gene sequence:
>807_bases ATGTCCGACTTTGAAACCGGTCCAGCAGCCAGCACCACCGCTGGCCGAGCCGCCCAGACGCCGCTGTTAATGCTCACCTC TGGGCGCTATCTCGACGACGACGAACTCTCCCAGCTCTACGGCTACCCGTCCGAACGCGCCGGCGTCTGGATACGGGCAA ACTTCATCACCAGTATAGACGGCGGTGCCACCGCCGACGGCAGGACCGGCGCCATGGCAGGGCCAGGCGACCGATTTGTG TTCAACATGCTGCGCGAACTCGCTGATGTGATCGTCGTCGGCGCGGGCACCGTACGGATCGAGAACTATTCCGGCGCGCA CCTGCCGGTAACCAAGCGCCAGCAGCGGCAGGCCCGCGGCCAAAGTGAAGTCCCCCAATTAGCGATTGTCACAAATTCGG GTCGGCTGGATCGGGATATGGCGGTGTTTACCCGGACCGAGATAGCACCACTGGTGCTCACCTGTACGGAGACCGCCAAG AAGCTGCGCACGCGGTTAGCTGATCTTGCCTACGTGGTCAGCTGCTCTGGCGACGATCCCAGCAAGGTCGACGAGACTGT CGTATTGGCGACCCTACAGACTCGCGGTCTGCGCCGGGTCCTTACCGAAGGCGGGCCGATGCTGCTCGGCTCGTTTATCC AGCACGGCATGCTCGACGAGCTGTGTCTGACCATCGCACCTTTGATAGTGGGCGGCCGGGCTCGACGTATCGCGACAGGC CCGGAGCAGCTGCTCACCCGTATGCGCTGTGCCCACGTTCTCACTGACGATGCCGGCTACCTTTACACCCGCTACGTCAA GGCCTGA
Upstream 100 bases:
>100_bases CGATCCACCAGGTGCCCCACCCGGAACGACGCTTCGGGTGGGTTTGCAGAGATGGACCTGTACATTGAAGACACTGTAGC AACGTGCTGCAATCAAACGG
Downstream 100 bases:
>100_bases CCCGGCGGCGGGAATGGCTACTGTGGTCGGCATGCGTTGGCACACCAGATCCGCCACGATTTTGGTTGCTGTTACCGCAT TGCTGGTAGGTTGTGTCCCG
Product: hypothetical protein
Products: 5-amino-6-(5-phosphoribosylamino)uracil; NADPH; H+
Alternate protein names: Bifunctional Deaminase-Reductase Domain-Containing Protein; 5-Amino-6-(5-Phosphoribosylamino)Uracil Reductase; Deaminase-Reductase Domain-Containing Protein; Diaminohydroxyphosphoribosylaminopyrimidine Reductase; Hydrolase; Pyrimidine Reductase Riboflavin Biosynthesis; Bifunctional Deaminase/Reductase; Bifunctional Riboflavin Biosynthesis Protein RibD; Pyrimidine Reductase-Like Protein; Bifunctional Riboflavin Biosynthesis Protein RibD; Pyrimidine Reductase Riboflavin Biosynthesis-Like Protein; Riboflavin/Cytosine Deaminase; Pyrimidine Reductase; Reductase; RibD Domain-Containing Protein; Riboflavin-Specific Deaminase/Reductase; Riboflavin-Specific Deaminase; 5-Amino-6-(5-Phosphoribosylamino)Uracil Reductase Ribd
Number of amino acids: Translated: 268; Mature: 267
Protein sequence:
>268_residues MSDFETGPAASTTAGRAAQTPLLMLTSGRYLDDDELSQLYGYPSERAGVWIRANFITSIDGGATADGRTGAMAGPGDRFV FNMLRELADVIVVGAGTVRIENYSGAHLPVTKRQQRQARGQSEVPQLAIVTNSGRLDRDMAVFTRTEIAPLVLTCTETAK KLRTRLADLAYVVSCSGDDPSKVDETVVLATLQTRGLRRVLTEGGPMLLGSFIQHGMLDELCLTIAPLIVGGRARRIATG PEQLLTRMRCAHVLTDDAGYLYTRYVKA
Sequences:
>Translated_268_residues MSDFETGPAASTTAGRAAQTPLLMLTSGRYLDDDELSQLYGYPSERAGVWIRANFITSIDGGATADGRTGAMAGPGDRFV FNMLRELADVIVVGAGTVRIENYSGAHLPVTKRQQRQARGQSEVPQLAIVTNSGRLDRDMAVFTRTEIAPLVLTCTETAK KLRTRLADLAYVVSCSGDDPSKVDETVVLATLQTRGLRRVLTEGGPMLLGSFIQHGMLDELCLTIAPLIVGGRARRIATG PEQLLTRMRCAHVLTDDAGYLYTRYVKA >Mature_267_residues SDFETGPAASTTAGRAAQTPLLMLTSGRYLDDDELSQLYGYPSERAGVWIRANFITSIDGGATADGRTGAMAGPGDRFVF NMLRELADVIVVGAGTVRIENYSGAHLPVTKRQQRQARGQSEVPQLAIVTNSGRLDRDMAVFTRTEIAPLVLTCTETAKK LRTRLADLAYVVSCSGDDPSKVDETVVLATLQTRGLRRVLTEGGPMLLGSFIQHGMLDELCLTIAPLIVGGRARRIATGP EQLLTRMRCAHVLTDDAGYLYTRYVKA
Specific function: Unknown
COG id: COG1985
COG function: function code H; Pyrimidine reductase, riboflavin biosynthesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 1.1.1.193
Molecular weight: Translated: 28981; Mature: 28849
Theoretical pI: Translated: 7.94; Mature: 7.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDFETGPAASTTAGRAAQTPLLMLTSGRYLDDDELSQLYGYPSERAGVWIRANFITSID CCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHCCCCCCCCEEEEEEEEEECC GGATADGRTGAMAGPGDRFVFNMLRELADVIVVGAGTVRIENYSGAHLPVTKRQQRQARG CCCCCCCCCCCCCCCCHHHHHHHHHHHHHEEEECCCEEEEECCCCCCCCCCHHHHHHHCC QSEVPQLAIVTNSGRLDRDMAVFTRTEIAPLVLTCTETAKKLRTRLADLAYVVSCSGDDP CCCCCEEEEEECCCCCCCHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHEEEEEECCCCC SKVDETVVLATLQTRGLRRVLTEGGPMLLGSFIQHGMLDELCLTIAPLIVGGRARRIATG CHHHHEEEEEHHHHHHHHHHHHCCCHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCC PEQLLTRMRCAHVLTDDAGYLYTRYVKA HHHHHHHHHHHHHHCCCCCEEEEEEECC >Mature Secondary Structure SDFETGPAASTTAGRAAQTPLLMLTSGRYLDDDELSQLYGYPSERAGVWIRANFITSID CCCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHCCCCCCCCEEEEEEEEEECC GGATADGRTGAMAGPGDRFVFNMLRELADVIVVGAGTVRIENYSGAHLPVTKRQQRQARG CCCCCCCCCCCCCCCCHHHHHHHHHHHHHEEEECCCEEEEECCCCCCCCCCHHHHHHHCC QSEVPQLAIVTNSGRLDRDMAVFTRTEIAPLVLTCTETAKKLRTRLADLAYVVSCSGDDP CCCCCEEEEEECCCCCCCHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHEEEEEECCCCC SKVDETVVLATLQTRGLRRVLTEGGPMLLGSFIQHGMLDELCLTIAPLIVGGRARRIATG CHHHHEEEEEHHHHHHHHHHHHCCCHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCC PEQLLTRMRCAHVLTDDAGYLYTRYVKA HHHHHHHHHHHHHHCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 5-amino-6-(5-phosphoribitylamino)uracil; NADP+
Specific reaction: 5-amino-6-(5-phosphoribitylamino)uracil + NADP+ = 5-amino-6-(5-phosphoribosylamino)uracil + NADPH + H+
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA