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The map label for this gene is yddH [H]

Identifier: 221230093

GI number: 221230093

Start: 1437037

End: 1437675

Strand: Reverse

Name: yddH [H]

Synonym: MLBr_01214

Alternate gene names: 221230093

Gene position: 1437675-1437037 (Counterclockwise)

Preceding gene: 221230100

Following gene: 221230092

Centisome position: 43.99

GC content: 62.75

Gene sequence:

>639_bases
ATGAATCGCATCTACACCTTCGTGACCGGCCTAGCAATGCTAGTAACCTCGATACTCACCTGCAGTCTCGCGTACGCTGA
CTCCGGCACCAGGACAGCGGACTACCAGCAAACTATCGACACCGTCGTCCAACGGGCTCTCGCGCAGCGCGGCGTGCCGT
TCTCCTGGGCCGGCGGCGGTGTTAGTGGCCCCACTCGCGGCACCGGTACCGGTAGCAACACTGTCGGCTTCGACGCCTCG
GGCCTGATCCAGTACGCCTACGCCGGCGCCGGACTCAAGCTTCCACGCTCGTCCGGCGAAATGTACAAAGTCGGCCAGAA
GGTGCTACCGCGGCACGCACGCCGAGGCGACCTGATCTTTTACGGTCCCGAAGGCACCGAAAGCGTTACGCTATATTTGG
GCGACGAGAAGATGGTGGAGGTCGGCGAAGTCGTCCAAGTGTCGCCAGTACGCAGCAACGGCATGGCACCCTACCTGGTT
CGGGTTCTCGGGACCCAACCGACATCAGTGCCGCAAGCACCCCTGCAGCAAGTGCCAACTCTGCCGGCACCGCAGCAAAC
GCCAACGCATCGTGCACCCTTGCAGCACATGCCCTTGCAGGTGCCAGTACGACCCGTTCCAGTCAGTACCGCGCGGTAG

Upstream 100 bases:

>100_bases
AGCGGGTAAGCCTCGCGTGAGTCATGAAATAGCAGCCGATGCGCGAAAGCACGGCGCTGAGGCCCAAAACGCCCTTGACC
GCCAAGAAGATTGGTATCCA

Downstream 100 bases:

>100_bases
CCCTATCCAACCAACGGGGGCTTGTTAAGCTACCGAAGTTAGCCATCTGCTCCCTTGGTGACGGCATCGAATGGTCAACG
AATCCGCTGAGCCGCCTTCC

Product: putative secreted p60-family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 212; Mature: 212

Protein sequence:

>212_residues
MNRIYTFVTGLAMLVTSILTCSLAYADSGTRTADYQQTIDTVVQRALAQRGVPFSWAGGGVSGPTRGTGTGSNTVGFDAS
GLIQYAYAGAGLKLPRSSGEMYKVGQKVLPRHARRGDLIFYGPEGTESVTLYLGDEKMVEVGEVVQVSPVRSNGMAPYLV
RVLGTQPTSVPQAPLQQVPTLPAPQQTPTHRAPLQHMPLQVPVRPVPVSTAR

Sequences:

>Translated_212_residues
MNRIYTFVTGLAMLVTSILTCSLAYADSGTRTADYQQTIDTVVQRALAQRGVPFSWAGGGVSGPTRGTGTGSNTVGFDAS
GLIQYAYAGAGLKLPRSSGEMYKVGQKVLPRHARRGDLIFYGPEGTESVTLYLGDEKMVEVGEVVQVSPVRSNGMAPYLV
RVLGTQPTSVPQAPLQQVPTLPAPQQTPTHRAPLQHMPLQVPVRPVPVSTAR
>Mature_212_residues
MNRIYTFVTGLAMLVTSILTCSLAYADSGTRTADYQQTIDTVVQRALAQRGVPFSWAGGGVSGPTRGTGTGSNTVGFDAS
GLIQYAYAGAGLKLPRSSGEMYKVGQKVLPRHARRGDLIFYGPEGTESVTLYLGDEKMVEVGEVVQVSPVRSNGMAPYLV
RVLGTQPTSVPQAPLQQVPTLPAPQQTPTHRAPLQHMPLQVPVRPVPVSTAR

Specific function: Unknown

COG id: COG0791

COG function: function code M; Cell wall-associated hydrolases (invasion-associated proteins)

Gene ontology:

Cell location: Attached To The Membrane By A Lipid Anchor [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nlpC/p60 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008258
- InterPro:   IPR000064 [H]

Pfam domain/function: PF00877 NLPC_P60; PF01464 SLT [H]

EC number: NA

Molecular weight: Translated: 22581; Mature: 22581

Theoretical pI: Translated: 9.92; Mature: 9.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRIYTFVTGLAMLVTSILTCSLAYADSGTRTADYQQTIDTVVQRALAQRGVPFSWAGGG
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCC
VSGPTRGTGTGSNTVGFDASGLIQYAYAGAGLKLPRSSGEMYKVGQKVLPRHARRGDLIF
CCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEE
YGPEGTESVTLYLGDEKMVEVGEVVQVSPVRSNGMAPYLVRVLGTQPTSVPQAPLQQVPT
ECCCCCCEEEEEECCCHHHHHCCEEEECCCCCCCCCHHHHHHHCCCCCCCCCCHHHHCCC
LPAPQQTPTHRAPLQHMPLQVPVRPVPVSTAR
CCCCCCCCCCCCCHHHCCEECCCCCCCCCCCC
>Mature Secondary Structure
MNRIYTFVTGLAMLVTSILTCSLAYADSGTRTADYQQTIDTVVQRALAQRGVPFSWAGGG
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCC
VSGPTRGTGTGSNTVGFDASGLIQYAYAGAGLKLPRSSGEMYKVGQKVLPRHARRGDLIF
CCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEE
YGPEGTESVTLYLGDEKMVEVGEVVQVSPVRSNGMAPYLVRVLGTQPTSVPQAPLQQVPT
ECCCCCCEEEEEECCCHHHHHCCEEEECCCCCCCCCHHHHHHHCCCCCCCCCCHHHHCCC
LPAPQQTPTHRAPLQHMPLQVPVRPVPVSTAR
CCCCCCCCCCCCCHHHCCEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]