| Definition | Mycobacterium leprae Br4923 chromosome, complete genome. |
|---|---|
| Accession | NC_011896 |
| Length | 3,268,071 |
Click here to switch to the map view.
The map label for this gene is 221230073
Identifier: 221230073
GI number: 221230073
Start: 1372881
End: 1373261
Strand: Reverse
Name: 221230073
Synonym: MLBr_01177
Alternate gene names: NA
Gene position: 1373261-1372881 (Counterclockwise)
Preceding gene: 221230074
Following gene: 221230072
Centisome position: 42.02
GC content: 60.1
Gene sequence:
>381_bases GTGTCCACTACACGTCGTCGGAGGCCCGCACTAGTTGCTTTGGTGACCATTGCGGCCTGTGGCTGCCTGGCCCTGGGCTG GTGGCAGTGGACCAGGTTTCAGTCAGCCTCGGGAACTTTCCAGAATCTGGGCTACGCTTTACAGTGGCCGCTGTTCGCCG GATTCTGCCTTTACACATACCACAACTTCGTGCGCTACGAAGAGTCACCCCCACAGCCACGGCACATGAACTGCATAGCC GAAATTCCACCCGAACTGCTGCCCGCTCGCCCCAAGCCCGAGCAGCAGCCACCCGATGACCCCGCCCTCCGGAAGTACAA CACCTACCTGGCCGAGCTGGCAAAGCAAGACGCCGAAAACCATAACAGGACCACCACATGA
Upstream 100 bases:
>100_bases GACTCGGCCGGACAAGTATGCCGTCGCCATCTACCGCAAGACCGCAGTGGCGCGCCGCGATCAATTCACCGGGTCCAAAT CGTGAGCGTACCGTCAAGGG
Downstream 100 bases:
>100_bases CCAGACCCGAGACACCCCAAGCACCCGACTTTGATTTTGAGAAGAGCCGCACCGCGCTACTCGGCTACCGAATCATGGCG TGGACAACGGGGATCTGGCT
Product: putative lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 126; Mature: 125
Protein sequence:
>126_residues MSTTRRRRPALVALVTIAACGCLALGWWQWTRFQSASGTFQNLGYALQWPLFAGFCLYTYHNFVRYEESPPQPRHMNCIA EIPPELLPARPKPEQQPPDDPALRKYNTYLAELAKQDAENHNRTTT
Sequences:
>Translated_126_residues MSTTRRRRPALVALVTIAACGCLALGWWQWTRFQSASGTFQNLGYALQWPLFAGFCLYTYHNFVRYEESPPQPRHMNCIA EIPPELLPARPKPEQQPPDDPALRKYNTYLAELAKQDAENHNRTTT >Mature_125_residues STTRRRRPALVALVTIAACGCLALGWWQWTRFQSASGTFQNLGYALQWPLFAGFCLYTYHNFVRYEESPPQPRHMNCIAE IPPELLPARPKPEQQPPDDPALRKYNTYLAELAKQDAENHNRTTT
Specific function: Unknown
COG id: COG4578
COG function: function code K; Glucitol operon activator
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.tuberculosis Rv1343c
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1177_MYCLE (P54134)
Other databases:
- EMBL: U00014 - EMBL: AL049191 - EMBL: AL583921 - PIR: S72785 - RefSeq: NP_301859.1 - EnsemblBacteria: EBMYCT00000029305 - GeneID: 910275 - GenomeReviews: AL450380_GR - KEGG: mle:ML1177 - NMPDR: fig|272631.1.peg.731 - Leproma: ML1177 - GeneTree: EBGT00050000017270 - HOGENOM: HBG672647 - OMA: KFVRYEE - ProtClustDB: CLSK791109 - BioCyc: MLEP272631:ML1177-MONOMER
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14480; Mature: 14348
Theoretical pI: Translated: 8.63; Mature: 8.63
Prosite motif: PS51257 PROKAR_LIPOPROTEIN; PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x299ab178)-; HASH(0x29c1d2a8)-;
Cys/Met content:
3.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTTRRRRPALVALVTIAACGCLALGWWQWTRFQSASGTFQNLGYALQWPLFAGFCLYTY CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCHHEEHHHHHHHHHHHH HNFVRYEESPPQPRHMNCIAEIPPELLPARPKPEQQPPDDPALRKYNTYLAELAKQDAEN HHHHHCCCCCCCCCCCHHHHHCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHC HNRTTT CCCCCH >Mature Secondary Structure STTRRRRPALVALVTIAACGCLALGWWQWTRFQSASGTFQNLGYALQWPLFAGFCLYTY CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCHHEEHHHHHHHHHHHH HNFVRYEESPPQPRHMNCIAEIPPELLPARPKPEQQPPDDPALRKYNTYLAELAKQDAEN HHHHHCCCCCCCCCCCHHHHHCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHC HNRTTT CCCCCH
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11234002