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The map label for this gene is oppC [C]

Identifier: 221230033

GI number: 221230033

Start: 1303256

End: 1304155

Strand: Reverse

Name: oppC [C]

Synonym: MLBr_01123

Alternate gene names: 221230033

Gene position: 1304155-1303256 (Counterclockwise)

Preceding gene: 221230034

Following gene: 221230032

Centisome position: 39.91

GC content: 56.78

Gene sequence:

>900_bases
GTGACCCTCACCGAGGGCCTATCCATTTCGGAGAAAACAAATTTCGCTTCTCGGAAAACCTTGGTGCTGCGCCGGTTTGC
GCACAACCGAACCGCGTCGGTGTCTCTAATGCTGTTAGTACTGCTGTTCGTCGCCTGCTATTTGCTGCCGTCGCTGCTGC
CCTATTCCTACGACGATCTTGATTTCAACGCGCTGCTGCAGCCGCCGAACACCCGGCACTGGCTGGGCACTAACGCGCTG
GGGCAAGACTTGTTGGCACAGACACTGCGTGGAATGCAGAAATCTATGTTGATCGGTGTCTGTGTGGCGCTTATATCGAC
CAGCATCGCCGCCACCGTAGGGTCGATCGCGGGTTATTTCGGGCGCTGGCGGGATCGGGTGCTGATGTGGGTGGTCGACC
TATTGCTGGTGGTGCCCAGTTTCGTCCTCATCGCCATCATGTCACCCCAAACCAAGAGTTCGGACAACATTATGCTGCTC
GTTCTGCTACTGGCCGGCTTTGGCTGGATGGTCAGCTCTCGCATGGTGCGCGGCATGACCATGAGCTTGCGCAAAAGCGA
ATTCATCCGTGCCGGTAAGTATATGGGCGTCTCCAGCCGTCGTATGATCGTTGGCCACGTGGTACCCAACGTGGCATCAA
TCTTGATTATCGACGCCACACTCAACGTGGGCTCCGCCATCCTGGCCGAAACTGGTTTGAGCTTTCTCGGTTTCGGCATT
AAGCCGCCGGATGTATCTTTAGGGACTTTGATCGCCAACGGCACTCAGTCCGCAACCACGTTCCCTTGGGTGTTCTTGTT
TCCAGCCGGCGTGTTGGTGGTAATTCTGGTTTGCGCCAACCTTACCGGCGATGGTTTGCGCGATGCGTTCGACCCGGTCA
GCAAGCACCTACGGCGATGA

Upstream 100 bases:

>100_bases
TCATCGCGGCCATCACGATCTTCTTCGGCACGGTCATACTGCTAGCCGGCCTGCTCTCCGATGTCATCTATGCAGCACTT
GATCCGCGGGTCCGAGTTTC

Downstream 100 bases:

>100_bases
GCCCTCTACTGGAAGTAACTGACCTGGCCGTCACGTTCGAAACAAATGGCGAACCAGTGACCGCGGTGCGCGGCATCAGC
TATCGCATCAACGCCGGAGA

Product: putative binding-protein dependent transport protein

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 299; Mature: 298

Protein sequence:

>299_residues
MTLTEGLSISEKTNFASRKTLVLRRFAHNRTASVSLMLLVLLFVACYLLPSLLPYSYDDLDFNALLQPPNTRHWLGTNAL
GQDLLAQTLRGMQKSMLIGVCVALISTSIAATVGSIAGYFGRWRDRVLMWVVDLLLVVPSFVLIAIMSPQTKSSDNIMLL
VLLLAGFGWMVSSRMVRGMTMSLRKSEFIRAGKYMGVSSRRMIVGHVVPNVASILIIDATLNVGSAILAETGLSFLGFGI
KPPDVSLGTLIANGTQSATTFPWVFLFPAGVLVVILVCANLTGDGLRDAFDPVSKHLRR

Sequences:

>Translated_299_residues
MTLTEGLSISEKTNFASRKTLVLRRFAHNRTASVSLMLLVLLFVACYLLPSLLPYSYDDLDFNALLQPPNTRHWLGTNAL
GQDLLAQTLRGMQKSMLIGVCVALISTSIAATVGSIAGYFGRWRDRVLMWVVDLLLVVPSFVLIAIMSPQTKSSDNIMLL
VLLLAGFGWMVSSRMVRGMTMSLRKSEFIRAGKYMGVSSRRMIVGHVVPNVASILIIDATLNVGSAILAETGLSFLGFGI
KPPDVSLGTLIANGTQSATTFPWVFLFPAGVLVVILVCANLTGDGLRDAFDPVSKHLRR
>Mature_298_residues
TLTEGLSISEKTNFASRKTLVLRRFAHNRTASVSLMLLVLLFVACYLLPSLLPYSYDDLDFNALLQPPNTRHWLGTNALG
QDLLAQTLRGMQKSMLIGVCVALISTSIAATVGSIAGYFGRWRDRVLMWVVDLLLVVPSFVLIAIMSPQTKSSDNIMLLV
LLLAGFGWMVSSRMVRGMTMSLRKSEFIRAGKYMGVSSRRMIVGHVVPNVASILIIDATLNVGSAILAETGLSFLGFGIK
PPDVSLGTLIANGTQSATTFPWVFLFPAGVLVVILVCANLTGDGLRDAFDPVSKHLRR

Specific function: Part Of The Binding-Protein-Dependent Transport System For Oligopeptides; Probably Responsible For The Translocation Of The Substrate Across The Membrane. [C]

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787498, Length=274, Percent_Identity=39.4160583941606, Blast_Score=172, Evalue=2e-44,
Organism=Escherichia coli, GI1787054, Length=274, Percent_Identity=31.3868613138686, Blast_Score=154, Evalue=5e-39,
Organism=Escherichia coli, GI1787760, Length=259, Percent_Identity=32.4324324324324, Blast_Score=143, Evalue=1e-35,
Organism=Escherichia coli, GI1789889, Length=246, Percent_Identity=30.4878048780488, Blast_Score=121, Evalue=4e-29,
Organism=Escherichia coli, GI1788505, Length=228, Percent_Identity=31.5789473684211, Blast_Score=109, Evalue=3e-25,
Organism=Escherichia coli, GI1789964, Length=249, Percent_Identity=32.5301204819277, Blast_Score=103, Evalue=2e-23,
Organism=Escherichia coli, GI1787549, Length=286, Percent_Identity=27.6223776223776, Blast_Score=91, Evalue=7e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 32535; Mature: 32404

Theoretical pI: Translated: 10.44; Mature: 10.44

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLTEGLSISEKTNFASRKTLVLRRFAHNRTASVSLMLLVLLFVACYLLPSLLPYSYDDL
CCCCCCCCCCHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
DFNALLQPPNTRHWLGTNALGQDLLAQTLRGMQKSMLIGVCVALISTSIAATVGSIAGYF
CCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GRWRDRVLMWVVDLLLVVPSFVLIAIMSPQTKSSDNIMLLVLLLAGFGWMVSSRMVRGMT
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
MSLRKSEFIRAGKYMGVSSRRMIVGHVVPNVASILIIDATLNVGSAILAETGLSFLGFGI
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHCHHHHCCCC
KPPDVSLGTLIANGTQSATTFPWVFLFPAGVLVVILVCANLTGDGLRDAFDPVSKHLRR
CCCCCCHHHEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TLTEGLSISEKTNFASRKTLVLRRFAHNRTASVSLMLLVLLFVACYLLPSLLPYSYDDL
CCCCCCCCCHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
DFNALLQPPNTRHWLGTNALGQDLLAQTLRGMQKSMLIGVCVALISTSIAATVGSIAGYF
CCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GRWRDRVLMWVVDLLLVVPSFVLIAIMSPQTKSSDNIMLLVLLLAGFGWMVSSRMVRGMT
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
MSLRKSEFIRAGKYMGVSSRRMIVGHVVPNVASILIIDATLNVGSAILAETGLSFLGFGI
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHCHHHHCCCC
KPPDVSLGTLIANGTQSATTFPWVFLFPAGVLVVILVCANLTGDGLRDAFDPVSKHLRR
CCCCCCHHHEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]