| Definition | Mycobacterium leprae Br4923 chromosome, complete genome. |
|---|---|
| Accession | NC_011896 |
| Length | 3,268,071 |
Click here to switch to the map view.
The map label for this gene is ppdK [H]
Identifier: 221229932
GI number: 221229932
Start: 1123058
End: 1124863
Strand: Reverse
Name: ppdK [H]
Synonym: MLBr_00955
Alternate gene names: 221229932
Gene position: 1124863-1123058 (Counterclockwise)
Preceding gene: 221229934
Following gene: 221229930
Centisome position: 34.42
GC content: 59.36
Gene sequence:
>1806_bases TTGCCCGGGCAGTCCCATAAAGAACCGCACAGGAGAGCAACATCAACACCGCGATCATTGAAGCAGGCAACGTCAGAATT GCGTTGGGCACTCAGCCTAGCTGCACCGGAATCCCCAGCATTCATGCGACACCTACTGGGAAACGCTCATGACAAAGTGG ACATCACGACATCGAGCGAACATGTCGCCGCGTTCACAGAACACGCCATAGTGTTGCTGAATGGTAATGCACACCAAACG CGGGAACTCCTGGGCGGCAAGGGCTATAACATCAACGCGATGCGCCGACACCAACTGGCAGTACCCCCAGCGTTCTGCAT CACCACCGAGGTCGGCGTTCGGTATTTGGCCGCTCCCACGCCGACGATGGAAGCGATCTGGAACGACGTGCTGGACCAGA TGCGATGGCTGGAAGCCGAAACCTCACGCACATTTGGGTGGGGACCGCGGCCATTGCTGGTCAGCATTCGCTCCGGAGCC GTCCAATCGATGCCCGGGATGATGGACACCATTCTAAACTTAGGCATAAATGATCCCGTCGAGCAGGCACTGGCAGCGGC CAGCCCCTCGCCGATCCCCCAAACCTTTGCCCGCGACACCCGTCTGCGGTTCATACGCACGTATCGGCGCATAGTGGATC CGTTAAATCCCCCACCCGCCAATACCTATGACCAATTACGCGCGGCCATAGAGTCAATTTTCTCCTCATGGAACTCTCCT CGCGCGGTTGCTTACCGCACCCACTACGGTCTAGACGATCAGAGTGGTACAGCTGTGATTGTGCAAGCGATGGTGTTTGG CAACCAAGGCGCCTACTCGGGAGCCGGAACGTTATTTTCCCGCAATCCGATAACCAGAGAGAGTAAACTGTTCGGCGAGT GGTTGCCTGGCGGACAAGGCGACGATGTGGTGTCAGGATTGGTTGAAGTCCAGCCGATCACGTCCCTGCGTGACGAGCAA CCTACTGTCTACGACGAGCTAGTGGACACCGCTGGCCGCTTGGAGCGACTGGGATCTGACGTGCAAGAGATCGAGTTCAC CACCGAGGACAGCAAGTTATGGCTGCTGCAGACCCGGGTCGCGGAACGCTCGGCGCAGGTCGCGGTGCGCCTGGCGCTGC AACTGTGGCAGGAGGGGCTCATCGACGATGCCGAGGCACTGCGCCGGGTGACCCCGGTGCATGTCGAGACCGTGTTGCTA CCCGTACTGCAACCGGAAAACCATTTATCTGCAACACTTTTAGCCAAAGGCACGCCCACTTGCCCGGGTGTGATATCAGG CAAGGCGTACACCGAAGTTGATGAAGCATTAGACGCTGCCGAGTCGGCCGAACAGGTTATCCTGGTGCGCGACCACACCA GGCCCGACGACGTCCTTGGCATGTTGGCATCACAGGGGGTTGTCACCGAGGTCGGCGGTGCCGCCAGTCATGCGGCAGTG GTCAGCCGCGAACTCAGCCGAGTGGCCGTAGTGGGCTGCGGCCAGGGAACCGCCGTATCGTTGGCTGGTAAGCAGATCAC CGTTGACGGCGACAAAGGCGAGGTACGCCAAGGCAATCTGACACTGTCCGCGTGGTCGGAGAACGAAACGCCGGAGCTGC GCGAGCTGGCCGACATAGCACGACGTATCAGCCCACTGCGCGTGCACATGACCGAGGACCACACGAGGCTGGATGACTCG TCCGATACTGCGGTGCGCTTAGCCATAAACACTGGGCATGCCGACGTGGTGTCAGCCACCCCGCTAATCGTCATGATGAC CACTCTGCGGCTGCAAGACTCAAAGGATTCAAGCGCCAAATCGTGA
Upstream 100 bases:
>100_bases AGTGTCAGGCCCAGCACCAGCCGCAGGATCAGTAACCCGATGTCATAGGAAGTCATAGATTCAAACCTAGATGATTTAAA CAAATCCTTGGCAGGTACCG
Downstream 100 bases:
>100_bases CTGAACTGACAGTGCTGCAAGCAGTTCGGCTGAAGGGCCGGGTAAGTTCTACCGACTTGGCCGCAACTTTGTACGACGAC CTTGTCGAGGTAACCAAAAC
Product: pyruvate phosphate dikinase
Products: NA
Alternate protein names: Pyruvate, orthophosphate dikinase [H]
Number of amino acids: Translated: 601; Mature: 600
Protein sequence:
>601_residues MPGQSHKEPHRRATSTPRSLKQATSELRWALSLAAPESPAFMRHLLGNAHDKVDITTSSEHVAAFTEHAIVLLNGNAHQT RELLGGKGYNINAMRRHQLAVPPAFCITTEVGVRYLAAPTPTMEAIWNDVLDQMRWLEAETSRTFGWGPRPLLVSIRSGA VQSMPGMMDTILNLGINDPVEQALAAASPSPIPQTFARDTRLRFIRTYRRIVDPLNPPPANTYDQLRAAIESIFSSWNSP RAVAYRTHYGLDDQSGTAVIVQAMVFGNQGAYSGAGTLFSRNPITRESKLFGEWLPGGQGDDVVSGLVEVQPITSLRDEQ PTVYDELVDTAGRLERLGSDVQEIEFTTEDSKLWLLQTRVAERSAQVAVRLALQLWQEGLIDDAEALRRVTPVHVETVLL PVLQPENHLSATLLAKGTPTCPGVISGKAYTEVDEALDAAESAEQVILVRDHTRPDDVLGMLASQGVVTEVGGAASHAAV VSRELSRVAVVGCGQGTAVSLAGKQITVDGDKGEVRQGNLTLSAWSENETPELRELADIARRISPLRVHMTEDHTRLDDS SDTAVRLAINTGHADVVSATPLIVMMTTLRLQDSKDSSAKS
Sequences:
>Translated_601_residues MPGQSHKEPHRRATSTPRSLKQATSELRWALSLAAPESPAFMRHLLGNAHDKVDITTSSEHVAAFTEHAIVLLNGNAHQT RELLGGKGYNINAMRRHQLAVPPAFCITTEVGVRYLAAPTPTMEAIWNDVLDQMRWLEAETSRTFGWGPRPLLVSIRSGA VQSMPGMMDTILNLGINDPVEQALAAASPSPIPQTFARDTRLRFIRTYRRIVDPLNPPPANTYDQLRAAIESIFSSWNSP RAVAYRTHYGLDDQSGTAVIVQAMVFGNQGAYSGAGTLFSRNPITRESKLFGEWLPGGQGDDVVSGLVEVQPITSLRDEQ PTVYDELVDTAGRLERLGSDVQEIEFTTEDSKLWLLQTRVAERSAQVAVRLALQLWQEGLIDDAEALRRVTPVHVETVLL PVLQPENHLSATLLAKGTPTCPGVISGKAYTEVDEALDAAESAEQVILVRDHTRPDDVLGMLASQGVVTEVGGAASHAAV VSRELSRVAVVGCGQGTAVSLAGKQITVDGDKGEVRQGNLTLSAWSENETPELRELADIARRISPLRVHMTEDHTRLDDS SDTAVRLAINTGHADVVSATPLIVMMTTLRLQDSKDSSAKS >Mature_600_residues PGQSHKEPHRRATSTPRSLKQATSELRWALSLAAPESPAFMRHLLGNAHDKVDITTSSEHVAAFTEHAIVLLNGNAHQTR ELLGGKGYNINAMRRHQLAVPPAFCITTEVGVRYLAAPTPTMEAIWNDVLDQMRWLEAETSRTFGWGPRPLLVSIRSGAV QSMPGMMDTILNLGINDPVEQALAAASPSPIPQTFARDTRLRFIRTYRRIVDPLNPPPANTYDQLRAAIESIFSSWNSPR AVAYRTHYGLDDQSGTAVIVQAMVFGNQGAYSGAGTLFSRNPITRESKLFGEWLPGGQGDDVVSGLVEVQPITSLRDEQP TVYDELVDTAGRLERLGSDVQEIEFTTEDSKLWLLQTRVAERSAQVAVRLALQLWQEGLIDDAEALRRVTPVHVETVLLP VLQPENHLSATLLAKGTPTCPGVISGKAYTEVDEALDAAESAEQVILVRDHTRPDDVLGMLASQGVVTEVGGAASHAAVV SRELSRVAVVGCGQGTAVSLAGKQITVDGDKGEVRQGNLTLSAWSENETPELRELADIARRISPLRVHMTEDHTRLDDSS DTAVRLAINTGHADVVSATPLIVMMTTLRLQDSKDSSAKS
Specific function: Catalyzes the reversible phosphorylation of pyruvate and phosphate. In E.histolytica and C.symbiosus, PPDK functions in the direction of ATP synthesis [H]
COG id: COG0574
COG function: function code G; Phosphoenolpyruvate synthase/pyruvate phosphate dikinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PEP-utilizing enzyme family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013815 - InterPro: IPR013816 - InterPro: IPR008279 - InterPro: IPR018274 - InterPro: IPR023151 - InterPro: IPR000121 - InterPro: IPR002192 - InterPro: IPR010121 - InterPro: IPR015813 [H]
Pfam domain/function: PF00391 PEP-utilizers; PF02896 PEP-utilizers_C; PF01326 PPDK_N [H]
EC number: =2.7.9.1 [H]
Molecular weight: Translated: 65312; Mature: 65181
Theoretical pI: Translated: 5.48; Mature: 5.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPGQSHKEPHRRATSTPRSLKQATSELRWALSLAAPESPAFMRHLLGNAHDKVDITTSSE CCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHEECCCCCHHHHHHHHCCCCCCEEEECCCH HVAAFTEHAIVLLNGNAHQTRELLGGKGYNINAMRRHQLAVPPAFCITTEVGVRYLAAPT HHHEEECCEEEEEECCHHHHHHHHCCCCCCCCHHHHCCCCCCCHHEEEHHHCCEEEECCC PTMEAIWNDVLDQMRWLEAETSRTFGWGPRPLLVSIRSGAVQSMPGMMDTILNLGINDPV CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCHHHCCHHHHHHHHCCCCCHH EQALAAASPSPIPQTFARDTRLRFIRTYRRIVDPLNPPPANTYDQLRAAIESIFSSWNSP HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCC RAVAYRTHYGLDDQSGTAVIVQAMVFGNQGAYSGAGTLFSRNPITRESKLFGEWLPGGQG CEEEEEEECCCCCCCCCEEEEEEHHHCCCCCCCCCCCEECCCCCCHHHHHHHHCCCCCCC DDVVSGLVEVQPITSLRDEQPTVYDELVDTAGRLERLGSDVQEIEFTTEDSKLWLLQTRV CHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHEEEECCCCEEEEEHHHH AERSAQVAVRLALQLWQEGLIDDAEALRRVTPVHVETVLLPVLQPENHLSATLLAKGTPT HHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCEEHHHEEECCCCCCCCCEEEEECCCCC CPGVISGKAYTEVDEALDAAESAEQVILVRDHTRPDDVLGMLASQGVVTEVGGAASHAAV CCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHCCCCHHHCCCCHHHHHH VSRELSRVAVVGCGQGTAVSLAGKQITVDGDKGEVRQGNLTLSAWSENETPELRELADIA HHHHHCEEEEEECCCCCEEEECCCEEEEECCCCCEEECCEEEEECCCCCCHHHHHHHHHH RRISPLRVHMTEDHTRLDDSSDTAVRLAINTGHADVVSATPLIVMMTTLRLQDSKDSSAK HHCCCEEEEEECCCCCCCCCCCCEEEEEEECCCCCHHHCCCHHHHHHHHHCCCCCCCCCC S C >Mature Secondary Structure PGQSHKEPHRRATSTPRSLKQATSELRWALSLAAPESPAFMRHLLGNAHDKVDITTSSE CCCCCCCHHHHHCCCHHHHHHHHHHHHHHHEECCCCCHHHHHHHHCCCCCCEEEECCCH HVAAFTEHAIVLLNGNAHQTRELLGGKGYNINAMRRHQLAVPPAFCITTEVGVRYLAAPT HHHEEECCEEEEEECCHHHHHHHHCCCCCCCCHHHHCCCCCCCHHEEEHHHCCEEEECCC PTMEAIWNDVLDQMRWLEAETSRTFGWGPRPLLVSIRSGAVQSMPGMMDTILNLGINDPV CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCHHHCCHHHHHHHHCCCCCHH EQALAAASPSPIPQTFARDTRLRFIRTYRRIVDPLNPPPANTYDQLRAAIESIFSSWNSP HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCC RAVAYRTHYGLDDQSGTAVIVQAMVFGNQGAYSGAGTLFSRNPITRESKLFGEWLPGGQG CEEEEEEECCCCCCCCCEEEEEEHHHCCCCCCCCCCCEECCCCCCHHHHHHHHCCCCCCC DDVVSGLVEVQPITSLRDEQPTVYDELVDTAGRLERLGSDVQEIEFTTEDSKLWLLQTRV CHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHEEEECCCCEEEEEHHHH AERSAQVAVRLALQLWQEGLIDDAEALRRVTPVHVETVLLPVLQPENHLSATLLAKGTPT HHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCEEHHHEEECCCCCCCCCEEEEECCCCC CPGVISGKAYTEVDEALDAAESAEQVILVRDHTRPDDVLGMLASQGVVTEVGGAASHAAV CCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHCCCCHHHCCCCHHHHHH VSRELSRVAVVGCGQGTAVSLAGKQITVDGDKGEVRQGNLTLSAWSENETPELRELADIA HHHHHCEEEEEECCCCCEEEECCCEEEEECCCCCEEECCEEEEECCCCCCHHHHHHHHHH RRISPLRVHMTEDHTRLDDSSDTAVRLAINTGHADVVSATPLIVMMTTLRLQDSKDSSAK HHCCCEEEEEECCCCCCCCCCCCEEEEEEECCCCCHHHCCCHHHHHHHHHCCCCCCCCCC S C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2176881; 6257292; 11695893; 11468288; 8610096; 9753432 [H]