| Definition | Mycobacterium leprae Br4923 chromosome, complete genome. |
|---|---|
| Accession | NC_011896 |
| Length | 3,268,071 |
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The map label for this gene is ribF [H]
Identifier: 221229855
GI number: 221229855
Start: 1012178
End: 1013173
Strand: Direct
Name: ribF [H]
Synonym: MLBr_00852
Alternate gene names: 221229855
Gene position: 1012178-1013173 (Clockwise)
Preceding gene: 221229854
Following gene: 221229856
Centisome position: 30.97
GC content: 62.15
Gene sequence:
>996_bases ATGGGGAGCCGTAGGCTTGCGATCGTGCAGCGGTGGCGGGGACAAGACGAGATCCCCACGGATTGGGGCAGATGCGTGCT TACTATCGGGGTGTTCGATGGTGTGCACCGCGGGCACACCGAGCTTATCGCACACACGGTGCAAACTGGCCGCGCACGCA ACGTGCCTACCGTGTTGATGACGTTCGACCCGCACCCGATGGAAGTGGTCTATCCAGGCAGCCACCCGGCGCAGCTGACC ACGTTGACCCGACGAGCTGAACTCATCGAGGAGTTGGGCATCGACGTGTTCCTGGTGATGCCGTTCACGACCGATTTCAT GAAACTCACCCCGGACCGCTACGTCCACGAGTTGCTGGTTGAACACCTGCACGTGGTGGAGGTCGTGGTGGGGGAGAACT TCACCTTCGGCAAGAAAGCGGCCGGCAACGTCATCATGTTGCGTCGGGCCGGGCAGCGGTTTGGGTTTGCGGTCGGGTCG ATGTCACTGTTGTCCGAACATCGCGGTAATGAGACCGTGGCGTTCTCATCGACCTACATCCGGTCCTGTGTGGACGCCGG TGACATGATGGCGGCGACCGAAGCGCTGGGCCGCCCACACCGCGTCGAGGGGATGGTGGTCCGCGGCCAAGGCCGAGGCA CTGAGCTTGGCTTTCCAACCGCGAATGTGGCTTCGCCGATGTATTCGGCCACCCCAGCCGACGGTGTCTATGCCGCGTGG TTCACCGTGCTTGGGCACGGTCCGGTGACTGGTACCGTGGTCCCAGGTGAATGCTATCAGGCCGCAGTGTCTGTCGGGAC CAATCCGACTTTTTCCGGACGCACCCGCACCGTAGAGGCGTTCGTTCTCGACGCCGTCGCCGACCTGTATGGACAGCATG TAGCGCTGGACTTCGTTGGGCGCATTCGTGGGCAACGAAAATTTGACTCGGTGGCCGATTTAGTCGCCGAGATGGAGAAG GACATTGACCGGGCGCGGGCCCTGCTGGCTGATTGA
Upstream 100 bases:
>100_bases GCAACCTGGGGTAGGGAACTGACTGCTTGGGCGTCCCGCCCGGCAACCCTTGGTACAGCACGGATTAACTCGCAATTTGG ATCTTGCACACCGGCGGATC
Downstream 100 bases:
>100_bases CTGGCCTTAGTTCGGCGAGCTGCTAAACTGCCGGACGACATCGGTGCGTGCTGCGGTTCGCGGTGGCCGCGCAGCAGTAC TGTCCATGATCGCGGACCAA
Product: bifunctional riboflavin kinase/FMN adenylyltransferase
Products: NA
Alternate protein names: Riboflavin kinase; Flavokinase; FMN adenylyltransferase; FAD pyrophosphorylase; FAD synthase [H]
Number of amino acids: Translated: 331; Mature: 330
Protein sequence:
>331_residues MGSRRLAIVQRWRGQDEIPTDWGRCVLTIGVFDGVHRGHTELIAHTVQTGRARNVPTVLMTFDPHPMEVVYPGSHPAQLT TLTRRAELIEELGIDVFLVMPFTTDFMKLTPDRYVHELLVEHLHVVEVVVGENFTFGKKAAGNVIMLRRAGQRFGFAVGS MSLLSEHRGNETVAFSSTYIRSCVDAGDMMAATEALGRPHRVEGMVVRGQGRGTELGFPTANVASPMYSATPADGVYAAW FTVLGHGPVTGTVVPGECYQAAVSVGTNPTFSGRTRTVEAFVLDAVADLYGQHVALDFVGRIRGQRKFDSVADLVAEMEK DIDRARALLAD
Sequences:
>Translated_331_residues MGSRRLAIVQRWRGQDEIPTDWGRCVLTIGVFDGVHRGHTELIAHTVQTGRARNVPTVLMTFDPHPMEVVYPGSHPAQLT TLTRRAELIEELGIDVFLVMPFTTDFMKLTPDRYVHELLVEHLHVVEVVVGENFTFGKKAAGNVIMLRRAGQRFGFAVGS MSLLSEHRGNETVAFSSTYIRSCVDAGDMMAATEALGRPHRVEGMVVRGQGRGTELGFPTANVASPMYSATPADGVYAAW FTVLGHGPVTGTVVPGECYQAAVSVGTNPTFSGRTRTVEAFVLDAVADLYGQHVALDFVGRIRGQRKFDSVADLVAEMEK DIDRARALLAD >Mature_330_residues GSRRLAIVQRWRGQDEIPTDWGRCVLTIGVFDGVHRGHTELIAHTVQTGRARNVPTVLMTFDPHPMEVVYPGSHPAQLTT LTRRAELIEELGIDVFLVMPFTTDFMKLTPDRYVHELLVEHLHVVEVVVGENFTFGKKAAGNVIMLRRAGQRFGFAVGSM SLLSEHRGNETVAFSSTYIRSCVDAGDMMAATEALGRPHRVEGMVVRGQGRGTELGFPTANVASPMYSATPADGVYAAWF TVLGHGPVTGTVVPGECYQAAVSVGTNPTFSGRTRTVEAFVLDAVADLYGQHVALDFVGRIRGQRKFDSVADLVAEMEKD IDRARALLAD
Specific function: Unknown
COG id: COG0196
COG function: function code H; FAD synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ribF family [H]
Homologues:
Organism=Homo sapiens, GI269973877, Length=136, Percent_Identity=31.6176470588235, Blast_Score=78, Evalue=9e-15, Organism=Escherichia coli, GI1786208, Length=303, Percent_Identity=36.3036303630363, Blast_Score=195, Evalue=4e-51, Organism=Caenorhabditis elegans, GI17541882, Length=131, Percent_Identity=33.587786259542, Blast_Score=68, Evalue=6e-12, Organism=Drosophila melanogaster, GI24644927, Length=131, Percent_Identity=37.4045801526718, Blast_Score=82, Evalue=6e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015864 - InterPro: IPR015865 - InterPro: IPR002606 - InterPro: IPR014729 [H]
Pfam domain/function: PF06574 FAD_syn; PF01687 Flavokinase [H]
EC number: =2.7.1.26; =2.7.7.2 [H]
Molecular weight: Translated: 36155; Mature: 36024
Theoretical pI: Translated: 6.65; Mature: 6.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSRRLAIVQRWRGQDEIPTDWGRCVLTIGVFDGVHRGHTELIAHTVQTGRARNVPTVLM CCCCHHHHHHHHCCCCCCCCCCCCEEEEEEHHCCCCCCHHHHHHHHHHCCCCCCCCEEEE TFDPHPMEVVYPGSHPAQLTTLTRRAELIEELGIDVFLVMPFTTDFMKLTPDRYVHELLV EECCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHCCHHHHHHHHHH EHLHVVEVVVGENFTFGKKAAGNVIMLRRAGQRFGFAVGSMSLLSEHRGNETVAFSSTYI HHHHHHHHEECCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCEEEEHHHHH RSCVDAGDMMAATEALGRPHRVEGMVVRGQGRGTELGFPTANVASPMYSATPADGVYAAW HHHHCCCHHHHHHHHHCCCCEECEEEEECCCCCCCCCCCCHHHCCCCCCCCCCCCHHHHH FTVLGHGPVTGTVVPGECYQAAVSVGTNPTFSGRTRTVEAFVLDAVADLYGQHVALDFVG HHHHCCCCCEEEEECCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHH RIRGQRKFDSVADLVAEMEKDIDRARALLAD HHCCCHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure GSRRLAIVQRWRGQDEIPTDWGRCVLTIGVFDGVHRGHTELIAHTVQTGRARNVPTVLM CCCHHHHHHHHCCCCCCCCCCCCEEEEEEHHCCCCCCHHHHHHHHHHCCCCCCCCEEEE TFDPHPMEVVYPGSHPAQLTTLTRRAELIEELGIDVFLVMPFTTDFMKLTPDRYVHELLV EECCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHCCHHHHHHHHHH EHLHVVEVVVGENFTFGKKAAGNVIMLRRAGQRFGFAVGSMSLLSEHRGNETVAFSSTYI HHHHHHHHEECCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCEEEEHHHHH RSCVDAGDMMAATEALGRPHRVEGMVVRGQGRGTELGFPTANVASPMYSATPADGVYAAW HHHHCCCHHHHHHHHHCCCCEECEEEEECCCCCCCCCCCCHHHCCCCCCCCCCCCHHHHH FTVLGHGPVTGTVVPGECYQAAVSVGTNPTFSGRTRTVEAFVLDAVADLYGQHVALDFVG HHHHCCCCCEEEEECCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHH RIRGQRKFDSVADLVAEMEKDIDRARALLAD HHCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7772835; 3023344 [H]