| Definition | Mycobacterium leprae Br4923 chromosome, complete genome. |
|---|---|
| Accession | NC_011896 |
| Length | 3,268,071 |
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The map label for this gene is 221229789
Identifier: 221229789
GI number: 221229789
Start: 875159
End: 875845
Strand: Reverse
Name: 221229789
Synonym: MLBr_00734
Alternate gene names: NA
Gene position: 875845-875159 (Counterclockwise)
Preceding gene: 221229793
Following gene: 221229786
Centisome position: 26.8
GC content: 58.52
Gene sequence:
>687_bases GTGTCTTTTCCCGATGCCACGATCACGCGCTTGCCCACAGTACTGCAGCCGTATGCGCAGCGCTACCACGAACTCATTAA ATTTGCCATCGTCGGCGGCACCACATTCATCATTGATTCAGCAATTTTCTACACCCTCAAACTGACGATTCTCGAGCCCA AACCGGTGACCGCCAAGGTCGTCGCCGGCATCGTCGCTGTTATCGCATCCTACGTGTTAAACAGGGAATGGAGCTTTCGG GACCGTGGCGGCCGCGAGCGCCATAATGAGGCGCTGCTGTTTTTCGCCTTCAGTGGCATAGGGGTGCTGCTAAGCATGGC ACCGCTGTGGTTCTCGAGCTATGTCCTGCAACTGCGCGCGCCCACGGTGTCACTAACCGTTGAAAACCTCGCCGACTTCC TATCAGCCTACATCATCGGCAATCTGCTACAGATGGCGTTTCGTTTCTGGGCATTCCGGCGCTGGGTGTTTCCCGACGCG TTCGCCCGCAACCCCGAAAAGACGCTGGAATCTGCCCTCACTGCGGGCGGCATCGCCGAAGTCTTCGAAGACGCCATCGA TGGCGTCTTCGAAGACTTCGGCGATGCCCTGTTGCGTGCCTGGCGCAATCGCTCCCGCCGCCTGGATTTGAGTCCCGCGT CTCAGCTGGGCGACTCTTCGGAGCCAAGGGTGTCGAAAACCTCGTGA
Upstream 100 bases:
>100_bases GCACAGCCATCATGGTGTCATGGCGACAGAGAGCATATTGACCCGTAGTAATACCCAACCGTTAGGTAGCATTTTACGTC AATCCGTACACTGACGTGTT
Downstream 100 bases:
>100_bases TACAACAACGCGTACATCTGGCGCAGGCGCGGAATGTTGTAGAATTCCACTGGATCTTGTGACGCGGATTCGATAATCAG TGTTCCGGTGCGGAACATTC
Product: hypothetical protein
Products: NA
Alternate protein names: Transmembrane Protein; GtrA-Like Protein; Conserved Membrane Protein; Gtra-Like Protein
Number of amino acids: Translated: 228; Mature: 227
Protein sequence:
>228_residues MSFPDATITRLPTVLQPYAQRYHELIKFAIVGGTTFIIDSAIFYTLKLTILEPKPVTAKVVAGIVAVIASYVLNREWSFR DRGGRERHNEALLFFAFSGIGVLLSMAPLWFSSYVLQLRAPTVSLTVENLADFLSAYIIGNLLQMAFRFWAFRRWVFPDA FARNPEKTLESALTAGGIAEVFEDAIDGVFEDFGDALLRAWRNRSRRLDLSPASQLGDSSEPRVSKTS
Sequences:
>Translated_228_residues MSFPDATITRLPTVLQPYAQRYHELIKFAIVGGTTFIIDSAIFYTLKLTILEPKPVTAKVVAGIVAVIASYVLNREWSFR DRGGRERHNEALLFFAFSGIGVLLSMAPLWFSSYVLQLRAPTVSLTVENLADFLSAYIIGNLLQMAFRFWAFRRWVFPDA FARNPEKTLESALTAGGIAEVFEDAIDGVFEDFGDALLRAWRNRSRRLDLSPASQLGDSSEPRVSKTS >Mature_227_residues SFPDATITRLPTVLQPYAQRYHELIKFAIVGGTTFIIDSAIFYTLKLTILEPKPVTAKVVAGIVAVIASYVLNREWSFRD RGGRERHNEALLFFAFSGIGVLLSMAPLWFSSYVLQLRAPTVSLTVENLADFLSAYIIGNLLQMAFRFWAFRRWVFPDAF ARNPEKTLESALTAGGIAEVFEDAIDGVFEDFGDALLRAWRNRSRRLDLSPASQLGDSSEPRVSKTS
Specific function: Unknown
COG id: COG2246
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25548; Mature: 25416
Theoretical pI: Translated: 8.84; Mature: 8.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFPDATITRLPTVLQPYAQRYHELIKFAIVGGTTFIIDSAIFYTLKLTILEPKPVTAKV CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHEEEEECCCCCHHHH VAGIVAVIASYVLNREWSFRDRGGRERHNEALLFFAFSGIGVLLSMAPLWFSSYVLQLRA HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCC PTVSLTVENLADFLSAYIIGNLLQMAFRFWAFRRWVFPDAFARNPEKTLESALTAGGIAE CCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHCCCHHH VFEDAIDGVFEDFGDALLRAWRNRSRRLDLSPASQLGDSSEPRVSKTS HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCCCCC >Mature Secondary Structure SFPDATITRLPTVLQPYAQRYHELIKFAIVGGTTFIIDSAIFYTLKLTILEPKPVTAKV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHEEEEECCCCCHHHH VAGIVAVIASYVLNREWSFRDRGGRERHNEALLFFAFSGIGVLLSMAPLWFSSYVLQLRA HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCC PTVSLTVENLADFLSAYIIGNLLQMAFRFWAFRRWVFPDAFARNPEKTLESALTAGGIAE CCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHCCCHHH VFEDAIDGVFEDFGDALLRAWRNRSRRLDLSPASQLGDSSEPRVSKTS HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA