| Definition | Mycobacterium leprae Br4923 chromosome, complete genome. |
|---|---|
| Accession | NC_011896 |
| Length | 3,268,071 |
Click here to switch to the map view.
The map label for this gene is yceF [C]
Identifier: 221229784
GI number: 221229784
Start: 871128
End: 871769
Strand: Reverse
Name: yceF [C]
Synonym: MLBr_00729
Alternate gene names: 221229784
Gene position: 871769-871128 (Counterclockwise)
Preceding gene: 221229785
Following gene: 221229783
Centisome position: 26.68
GC content: 58.26
Gene sequence:
>642_bases ATGACCCGGCTGGTACTCGGGTCCGCTTCCGCCGGTCGACTCAAAGTGCTTCGCCAAGCCGGCATTGATCCACTGGTCGC AGCTTCCGGTGTCGATGAAGATCTGGTCACCGCAGGCCTCGGGTCAGACACTTCGCCGCGCGATGTGGTAAGCACACTCG CCCGAGCCAAAGCCACCCAAGTCGCGGCAGCTCTGAGCCACGCAGTCGCAGACGATTGCGTTGTCATTAGCTGTGATTCA CAACTTTCCATCGATGGCCGACTGTACGGCAAACCGCAGTCCGTCGCCAACGCACGGCAACAGTGGCAGTCGATGGCAGG GCGCGCCGGCCAACTCTATACCGGTCACTGCGTTATCCGGTTACTAAACAACGAAACTACTTATTCTGTCGATGAAACAT CAATGACCACAATATGTTTCGGAAATCCGTCAGCTGAAGACCTGGAAGCCTACCTGGCATGCGGCGAATCGTTGCAAGTC GCTGGAGGGTTCACGCTTGACGGCCTAGGTGGCTGGTTCATCGACGCGGTCTACGGCGATCCGTCAACCGTTGTAGGGAT CGGACTGCCTTTGACGCGGTCGCTACTGTCCCGTGCGGGGTTGTCTATTGCCGCAATGTGGGCAGCCAATCCGGTCATCT AG
Upstream 100 bases:
>100_bases AGCCCGAACCCACTCGATGGGGCCTGCCGGTCGACAAGTTGCGGTACCCGGTCTTCAGCTGGCAACGCATCACCCTTCAC GAGATGACGCATATGCGCCG
Downstream 100 bases:
>100_bases AAATTCAGCCGTTGCACCTCAGCAGCATGATGCGTTACCTGCACTGCCTCCGGCTAGTACCCAGGCCACGGTTAGTGAAC CGTGTGCCGATGGGTTGCTC
Product: Maf-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 213; Mature: 212
Protein sequence:
>213_residues MTRLVLGSASAGRLKVLRQAGIDPLVAASGVDEDLVTAGLGSDTSPRDVVSTLARAKATQVAAALSHAVADDCVVISCDS QLSIDGRLYGKPQSVANARQQWQSMAGRAGQLYTGHCVIRLLNNETTYSVDETSMTTICFGNPSAEDLEAYLACGESLQV AGGFTLDGLGGWFIDAVYGDPSTVVGIGLPLTRSLLSRAGLSIAAMWAANPVI
Sequences:
>Translated_213_residues MTRLVLGSASAGRLKVLRQAGIDPLVAASGVDEDLVTAGLGSDTSPRDVVSTLARAKATQVAAALSHAVADDCVVISCDS QLSIDGRLYGKPQSVANARQQWQSMAGRAGQLYTGHCVIRLLNNETTYSVDETSMTTICFGNPSAEDLEAYLACGESLQV AGGFTLDGLGGWFIDAVYGDPSTVVGIGLPLTRSLLSRAGLSIAAMWAANPVI >Mature_212_residues TRLVLGSASAGRLKVLRQAGIDPLVAASGVDEDLVTAGLGSDTSPRDVVSTLARAKATQVAAALSHAVADDCVVISCDSQ LSIDGRLYGKPQSVANARQQWQSMAGRAGQLYTGHCVIRLLNNETTYSVDETSMTTICFGNPSAEDLEAYLACGESLQVA GGFTLDGLGGWFIDAVYGDPSTVVGIGLPLTRSLLSRAGLSIAAMWAANPVI
Specific function: Unknown
COG id: COG0424
COG function: function code D; Nucleotide-binding protein implicated in inhibition of septum formation
Gene ontology:
Cell location: Cytoplasm (Potential)
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the maf family
Homologues:
Organism=Homo sapiens, GI117553627, Length=193, Percent_Identity=31.6062176165803, Blast_Score=74, Evalue=9e-14, Organism=Escherichia coli, GI87081830, Length=201, Percent_Identity=30.8457711442786, Blast_Score=80, Evalue=1e-16, Organism=Escherichia coli, GI1789646, Length=197, Percent_Identity=28.9340101522843, Blast_Score=71, Evalue=6e-14, Organism=Caenorhabditis elegans, GI193202443, Length=192, Percent_Identity=28.125, Blast_Score=80, Evalue=5e-16, Organism=Drosophila melanogaster, GI78706856, Length=192, Percent_Identity=27.0833333333333, Blast_Score=70, Evalue=8e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y729_MYCLB (B8ZUX8)
Other databases:
- EMBL: FM211192 - RefSeq: YP_002503200.1 - ProteinModelPortal: B8ZUX8 - SMR: B8ZUX8 - EnsemblBacteria: EBMYCT00000087116 - GeneID: 7326002 - GenomeReviews: FM211192_GR - GeneTree: EBGT00050000015014 - HOGENOM: HBG414045 - OMA: VVGCDSM - ProtClustDB: PRK00148 - GO: GO:0005737 - HAMAP: MF_00528 - InterPro: IPR003697 - PIRSF: PIRSF006305 - TIGRFAMs: TIGR00172
Pfam domain/function: PF02545 Maf
EC number: NA
Molecular weight: Translated: 22061; Mature: 21930
Theoretical pI: Translated: 4.58; Mature: 4.58
Prosite motif: NA
Important sites: ACT_SITE 33-33
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRLVLGSASAGRLKVLRQAGIDPLVAASGVDEDLVTAGLGSDTSPRDVVSTLARAKATQ CCEEEECCCCCHHHHHHHHCCCCCEEECCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHH VAAALSHAVADDCVVISCDSQLSIDGRLYGKPQSVANARQQWQSMAGRAGQLYTGHCVIR HHHHHHHHHCCCEEEEEECCCEEECCEECCCCHHHHHHHHHHHHHHCCCCCEEEEEEEEE LLNNETTYSVDETSMTTICFGNPSAEDLEAYLACGESLQVAGGFTLDGLGGWFIDAVYGD EECCCCEEEECCCCEEEEEECCCCHHHHHHHHHCCCCEEECCCEEECCCCCEEEEEEECC PSTVVGIGLPLTRSLLSRAGLSIAAMWAANPVI CCEEEEECCHHHHHHHHHCCCEEEEEECCCCCC >Mature Secondary Structure TRLVLGSASAGRLKVLRQAGIDPLVAASGVDEDLVTAGLGSDTSPRDVVSTLARAKATQ CEEEECCCCCHHHHHHHHCCCCCEEECCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHH VAAALSHAVADDCVVISCDSQLSIDGRLYGKPQSVANARQQWQSMAGRAGQLYTGHCVIR HHHHHHHHHCCCEEEEEECCCEEECCEECCCCHHHHHHHHHHHHHHCCCCCEEEEEEEEE LLNNETTYSVDETSMTTICFGNPSAEDLEAYLACGESLQVAGGFTLDGLGGWFIDAVYGD EECCCCEEEECCCCEEEEEECCCCHHHHHHHHHCCCCEEECCCEEECCCCCEEEEEEECC PSTVVGIGLPLTRSLLSRAGLSIAAMWAANPVI CCEEEEECCHHHHHHHHHCCCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA