| Definition | Mycobacterium leprae Br4923 chromosome, complete genome. |
|---|---|
| Accession | NC_011896 |
| Length | 3,268,071 |
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The map label for this gene is hrcA
Identifier: 221229732
GI number: 221229732
Start: 756779
End: 757810
Strand: Direct
Name: hrcA
Synonym: MLBr_00624
Alternate gene names: 221229732
Gene position: 756779-757810 (Clockwise)
Preceding gene: 221229731
Following gene: 221229733
Centisome position: 23.16
GC content: 61.24
Gene sequence:
>1032_bases GTGGGGAATGCCGACGAGCGTCGCTTTGAGGTGCTGCGCGCCATTGTAGCCGACTTCGTCGCCACCAAGGAACCGATCGG ATCGAGGGCTTTGGTGGAGCGTCACAACTTAGGCGTGTCCAGCGCAACCATCCGCAACGACATGGCGGTGTTAGAGGCCG AGGGGTACATCACTCAGCCGCATACCAGCTCCGGGCGAGTGCCCACGGAGAAGGGCTATCGCGAGTTTGTTGATCGACTC GAAGACGTTAAGCCGCTATCAGCGGCCGAGCGGCGGGCGATCCAAAGCTTTCTGGAGTCCGGTGTCGACCTCGACGACGT GCTACGCCGCGCTGTGCGACTATTGGCTCAGCTGACCTGTCAGGTGGCCGTGGTGCAGTACCCCACCTTGTCGACGTCGA CCGTTCGCCATCTGGAAGTAATCGCGCTGAGCCCGGCCAGGTTGCTGATGGTGGTTATCACCGAGTCCGGTCGGGTGGAT CAGCGCATCGCCGAACTCGGCGATGTTATCGACGATTACCAGCTCTCCCAGCTGCGTGAAATGCTCAGCCAGGCAATGGG AGGCAAGAAACTGTCGGCGGCCTCGGCCGCGGTAGCCGACCTCGTCGGACGGTTTCGGGGTACGGGCGGGTTGGCCAATG CCGTCGGCCGCTCGGCGAACGTATTGCTGGAATCGCTAGTCGAACACACCGAAGAACGCTTGTTGCTGGGTGGCACTGCC AACCTGACCCGCAACTCTGCGGACTTCGGTGGTTCACTGCGATCCATCTTGGAAGCCCTCGAAGAACAGGTGGTGGTGCT GCGACTGCTGGCCGCCCAACAGGAGGCTGGCAAGGTGACTGTGCGTATTGGTCACGAAACGGCGGCTGAGCAAATAATGG GTACCTCGATGGTGTCCACCGCCTACGGTACCTCGGGTACCGTCTACGGCGGCATGGGTGTGTTGGGGCCTACCCGGATG GATTATCCGGGAACTATCGCCAGTGTCGCTGCGGTTGCTTTGTATATCGGCGAAGTTTTGGGTGCTCGGTGA
Upstream 100 bases:
>100_bases CGGCTTGGGTGGGGGTGGTACCACCGCCCGACGGCCGCTCATGGCGGCCAGCGCCATTGTGAGAACGTAAAATGAACGCG ACTAAGGAGGTGGACTGGCG
Downstream 100 bases:
>100_bases ACACGCACCCGCTACGGAATCTGTGGACAGCCGCTTAGAAGCGGCATAAGACGCTGCTAGGAGAGTTAGGCGTGGCACGC GATTATTACGGGCTGCTCGG
Product: heat-inducible transcription repressor
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 343; Mature: 342
Protein sequence:
>343_residues MGNADERRFEVLRAIVADFVATKEPIGSRALVERHNLGVSSATIRNDMAVLEAEGYITQPHTSSGRVPTEKGYREFVDRL EDVKPLSAAERRAIQSFLESGVDLDDVLRRAVRLLAQLTCQVAVVQYPTLSTSTVRHLEVIALSPARLLMVVITESGRVD QRIAELGDVIDDYQLSQLREMLSQAMGGKKLSAASAAVADLVGRFRGTGGLANAVGRSANVLLESLVEHTEERLLLGGTA NLTRNSADFGGSLRSILEALEEQVVVLRLLAAQQEAGKVTVRIGHETAAEQIMGTSMVSTAYGTSGTVYGGMGVLGPTRM DYPGTIASVAAVALYIGEVLGAR
Sequences:
>Translated_343_residues MGNADERRFEVLRAIVADFVATKEPIGSRALVERHNLGVSSATIRNDMAVLEAEGYITQPHTSSGRVPTEKGYREFVDRL EDVKPLSAAERRAIQSFLESGVDLDDVLRRAVRLLAQLTCQVAVVQYPTLSTSTVRHLEVIALSPARLLMVVITESGRVD QRIAELGDVIDDYQLSQLREMLSQAMGGKKLSAASAAVADLVGRFRGTGGLANAVGRSANVLLESLVEHTEERLLLGGTA NLTRNSADFGGSLRSILEALEEQVVVLRLLAAQQEAGKVTVRIGHETAAEQIMGTSMVSTAYGTSGTVYGGMGVLGPTRM DYPGTIASVAAVALYIGEVLGAR >Mature_342_residues GNADERRFEVLRAIVADFVATKEPIGSRALVERHNLGVSSATIRNDMAVLEAEGYITQPHTSSGRVPTEKGYREFVDRLE DVKPLSAAERRAIQSFLESGVDLDDVLRRAVRLLAQLTCQVAVVQYPTLSTSTVRHLEVIALSPARLLMVVITESGRVDQ RIAELGDVIDDYQLSQLREMLSQAMGGKKLSAASAAVADLVGRFRGTGGLANAVGRSANVLLESLVEHTEERLLLGGTAN LTRNSADFGGSLRSILEALEEQVVVLRLLAAQQEAGKVTVRIGHETAAEQIMGTSMVSTAYGTSGTVYGGMGVLGPTRMD YPGTIASVAAVALYIGEVLGAR
Specific function: Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
COG id: COG1420
COG function: function code K; Transcriptional regulator of heat shock gene
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hrcA family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HRCA_MYCLB (B8ZUS6)
Other databases:
- EMBL: FM211192 - RefSeq: YP_002503148.1 - ProteinModelPortal: B8ZUS6 - SMR: B8ZUS6 - EnsemblBacteria: EBMYCT00000087524 - GeneID: 7326973 - GenomeReviews: FM211192_GR - GeneTree: EBGT00050000016264 - HOGENOM: HBG729878 - OMA: LEQPHTS - ProtClustDB: PRK00082 - GO: GO:0006350 - HAMAP: MF_00081 - InterPro: IPR002571 - InterPro: IPR021153 - InterPro: IPR011991 - Gene3D: G3DSA:1.10.10.10 - PIRSF: PIRSF005485 - TIGRFAMs: TIGR00331
Pfam domain/function: PF01628 HrcA
EC number: NA
Molecular weight: Translated: 36648; Mature: 36517
Theoretical pI: Translated: 5.48; Mature: 5.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGNADERRFEVLRAIVADFVATKEPIGSRALVERHNLGVSSATIRNDMAVLEAEGYITQP CCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCHHHHHHCHHEEECCCCEECC HTSSGRVPTEKGYREFVDRLEDVKPLSAAERRAIQSFLESGVDLDDVLRRAVRLLAQLTC CCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH QVAVVQYPTLSTSTVRHLEVIALSPARLLMVVITESGRVDQRIAELGDVIDDYQLSQLRE HHHEEECCCCCHHHHHHHHHEEECHHHEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHH MLSQAMGGKKLSAASAAVADLVGRFRGTGGLANAVGRSANVLLESLVEHTEERLLLGGTA HHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHEEECCCC NLTRNSADFGGSLRSILEALEEQVVVLRLLAAQQEAGKVTVRIGHETAAEQIMGTSMVST CCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHH AYGTSGTVYGGMGVLGPTRMDYPGTIASVAAVALYIGEVLGAR HCCCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure GNADERRFEVLRAIVADFVATKEPIGSRALVERHNLGVSSATIRNDMAVLEAEGYITQP CCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCHHHHHHCHHEEECCCCEECC HTSSGRVPTEKGYREFVDRLEDVKPLSAAERRAIQSFLESGVDLDDVLRRAVRLLAQLTC CCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH QVAVVQYPTLSTSTVRHLEVIALSPARLLMVVITESGRVDQRIAELGDVIDDYQLSQLRE HHHEEECCCCCHHHHHHHHHEEECHHHEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHH MLSQAMGGKKLSAASAAVADLVGRFRGTGGLANAVGRSANVLLESLVEHTEERLLLGGTA HHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHEEECCCC NLTRNSADFGGSLRSILEALEEQVVVLRLLAAQQEAGKVTVRIGHETAAEQIMGTSMVST CCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHH AYGTSGTVYGGMGVLGPTRMDYPGTIASVAAVALYIGEVLGAR HCCCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA