| Definition | Mycobacterium leprae Br4923 chromosome, complete genome. |
|---|---|
| Accession | NC_011896 |
| Length | 3,268,071 |
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The map label for this gene is tkt
Identifier: 221229709
GI number: 221229709
Start: 707614
End: 709713
Strand: Reverse
Name: tkt
Synonym: MLBr_00583
Alternate gene names: 221229709
Gene position: 709713-707614 (Counterclockwise)
Preceding gene: 221229711
Following gene: 221229708
Centisome position: 21.72
GC content: 60.76
Gene sequence:
>2100_bases GTGACCACACTCGACCAGATCTCCACGCTGACCCAACCGCGCCATCCCGATGACTGGACCGAGATCGATTCGGCTGCAGT CGACACCATCAGGGTGTTGGCTACCGACGCGGTCCAAAAAGCTGGCAACGGGCACCCGGGGACGGCGATGAGCTTGGCCC CGCTGGCCTACACTTTGTTCCAGCGCACTCTACGCCACGACCCCAATGACACCGCATGGCTGGGTCGTGACCGATTCGTG CTGTCGGCCGGGCATAGCAGCCTGACCTTATATATACAACTCTATCTCGGCGGCTTCGGTCTCGAACTATCTGACATCGA ATCGCTGCGCACCTGGGGATCCACAACTCCTGGGCATCCAGAGTTCCGGCACACTAAGGGTGTTGAGATCACCACCGGCC CACTCGGCCAGGGTCTAGCATCAGCAGTCGGGATGGCGATGGCATCACGTTACGAACGTGGCCTGTTCGACCCCGACGCT GAACCGGGAGCCAGCCCTTTCGACCATTACATTTATGTGATCGCCTCCGACGGGGACATCGAAGAAGGGGTGACATCGGA AGCGTCGTCCCTGGCCGCAGTCCAGCAACTCGGCAACCTCATCGTGTTCTACGACCACAACCAGATCTCGATCGAAGGCG ACACCAAAATCACGCTGTGCGAGGACACCGCCGCACGCTACCGCGCCTACGGCTGGCACGTACAAGAGGTGGAAGGTGGC GAGAACGTCGTCGGCATTGAGGAAGCCATCGCCAACGCGAAAGCCGCCACCGACCGGCCGTCGTTCATCTCACTGCGCAC CATCATCGGTTATCCCGCGCCAACCTTGATAAACACCGGCAAAGCGCACGGTGCGGCCCTTGGCGAAGACGAGGTAGCGG CCACTAAGCGAATCCTTGGGTTCGATCCCGACAAGACCTTTGCAGTCCGCGAGGACGTAATCACCCACACCCGCGGCTTG ATAGCCCGCGGCAAAGAAGCCCACGAACGCTGGCAACTAGAATTCGAAGCGTGGGCACAGCGCGAGCCCGAACGCAAGGC ACTGTTGGATCGGTTGCTCGCCCAGCAGCTTCCCGACGGCTGGGATGCTGACCTGCCGAACTGGGAGCCGAGGTCCAAGG AATTGGCCACCCGCGCCGCATCTGGTGCGGTACTATCCGCGATAGGACCGAAACTCCCGGAGTTGTGGGGCGGGTCGGCC GATCTAGCGGGCAGCAACAACACCACCATAAAAGACGTTGATTCCTTTGGGCCGCCGTCGATTTCGACCGACGAGTACAC CGCACATTGGTATGGTCGCACCTTGCATTTCGGTGTTCGCGAACACGCGATGGGCGCCATTCTGTCCGGCATCGTGCTGC ACGGCCCCACCCGCGCATATGGTGGTACATTTCTACAATTCTCCGACTACATGCGCCCGTCGGTGCGACTGGCGTCGTTG ATGGATATTGACACGATCTACGTGTGGACGCACGATTCGGTCGGACTCGGCGAGGACGGCCCAACCCATCAGCCCATCGA ACACCTCGCAGCGTTGCGTGCTATCCCTCGATTGTCGGTGGTGCGTCCCGCCGATGCCAACGAAACGGCATATGCCTGGC GCACAATCCTGGCTCGCGGCGCCAACAGCGGTCCGGTCGGGCTAATCCTGACCCGGCAGAGTGTGCCAGTGTTGGAAGGC ACCAACACCGAAGGCGTCGCCCGAGGCGGCTATGTGCTAGGCGATGGTGGCAGCTCTGAAGCTAAGGAGCCTGACGTCAT TTTGATCGCCACCGGATCCGAGGTCCAACTCGCTGTCGCAGCTCAGAAGTTGTTGGCGGATAAAGACATCATTGTGCGGG TGGTGTCGATGCCGTGTGTGGAATGGTTCGAGTCACAGCCGTACGAGTATCGCGACAGTGTGTTGCCCCCGTCAGTGTCG GCACGGGTGGCCGTCGAGGCCGGCGTCGCGCAATGCTGGCATAAGCTGGTCGGAGACACCGGCAAGATTGTGTCCATCGA GCACTACGGCGAATCCGCAGATTACCAGACTTTGTTCCGTGAGTACGGCTTCACGCCGGAGGCCGTGGTTGCCGCAGCGG AACAGGTATTGGATAACTGA
Upstream 100 bases:
>100_bases TAGGTACCTGGAAACCGGGCCCTGCAACAGGCCCGCACTTCCACACTAGGGTGAGATTAATCAGTTTGATGACCTGAACA GCTGACCCAAGGACTGATTC
Downstream 100 bases:
>100_bases AAAAAAGGCGATCTGTATGACCTCAAAAATTCAGAACCCCAACCTCGCCGCATTGAGCGCTGCCGGAGTGTCCGTTTGGT TGGACGACTTGTCGCGAGAC
Product: transketolase
Products: NA
Alternate protein names: TK
Number of amino acids: Translated: 699; Mature: 698
Protein sequence:
>699_residues MTTLDQISTLTQPRHPDDWTEIDSAAVDTIRVLATDAVQKAGNGHPGTAMSLAPLAYTLFQRTLRHDPNDTAWLGRDRFV LSAGHSSLTLYIQLYLGGFGLELSDIESLRTWGSTTPGHPEFRHTKGVEITTGPLGQGLASAVGMAMASRYERGLFDPDA EPGASPFDHYIYVIASDGDIEEGVTSEASSLAAVQQLGNLIVFYDHNQISIEGDTKITLCEDTAARYRAYGWHVQEVEGG ENVVGIEEAIANAKAATDRPSFISLRTIIGYPAPTLINTGKAHGAALGEDEVAATKRILGFDPDKTFAVREDVITHTRGL IARGKEAHERWQLEFEAWAQREPERKALLDRLLAQQLPDGWDADLPNWEPRSKELATRAASGAVLSAIGPKLPELWGGSA DLAGSNNTTIKDVDSFGPPSISTDEYTAHWYGRTLHFGVREHAMGAILSGIVLHGPTRAYGGTFLQFSDYMRPSVRLASL MDIDTIYVWTHDSVGLGEDGPTHQPIEHLAALRAIPRLSVVRPADANETAYAWRTILARGANSGPVGLILTRQSVPVLEG TNTEGVARGGYVLGDGGSSEAKEPDVILIATGSEVQLAVAAQKLLADKDIIVRVVSMPCVEWFESQPYEYRDSVLPPSVS ARVAVEAGVAQCWHKLVGDTGKIVSIEHYGESADYQTLFREYGFTPEAVVAAAEQVLDN
Sequences:
>Translated_699_residues MTTLDQISTLTQPRHPDDWTEIDSAAVDTIRVLATDAVQKAGNGHPGTAMSLAPLAYTLFQRTLRHDPNDTAWLGRDRFV LSAGHSSLTLYIQLYLGGFGLELSDIESLRTWGSTTPGHPEFRHTKGVEITTGPLGQGLASAVGMAMASRYERGLFDPDA EPGASPFDHYIYVIASDGDIEEGVTSEASSLAAVQQLGNLIVFYDHNQISIEGDTKITLCEDTAARYRAYGWHVQEVEGG ENVVGIEEAIANAKAATDRPSFISLRTIIGYPAPTLINTGKAHGAALGEDEVAATKRILGFDPDKTFAVREDVITHTRGL IARGKEAHERWQLEFEAWAQREPERKALLDRLLAQQLPDGWDADLPNWEPRSKELATRAASGAVLSAIGPKLPELWGGSA DLAGSNNTTIKDVDSFGPPSISTDEYTAHWYGRTLHFGVREHAMGAILSGIVLHGPTRAYGGTFLQFSDYMRPSVRLASL MDIDTIYVWTHDSVGLGEDGPTHQPIEHLAALRAIPRLSVVRPADANETAYAWRTILARGANSGPVGLILTRQSVPVLEG TNTEGVARGGYVLGDGGSSEAKEPDVILIATGSEVQLAVAAQKLLADKDIIVRVVSMPCVEWFESQPYEYRDSVLPPSVS ARVAVEAGVAQCWHKLVGDTGKIVSIEHYGESADYQTLFREYGFTPEAVVAAAEQVLDN >Mature_698_residues TTLDQISTLTQPRHPDDWTEIDSAAVDTIRVLATDAVQKAGNGHPGTAMSLAPLAYTLFQRTLRHDPNDTAWLGRDRFVL SAGHSSLTLYIQLYLGGFGLELSDIESLRTWGSTTPGHPEFRHTKGVEITTGPLGQGLASAVGMAMASRYERGLFDPDAE PGASPFDHYIYVIASDGDIEEGVTSEASSLAAVQQLGNLIVFYDHNQISIEGDTKITLCEDTAARYRAYGWHVQEVEGGE NVVGIEEAIANAKAATDRPSFISLRTIIGYPAPTLINTGKAHGAALGEDEVAATKRILGFDPDKTFAVREDVITHTRGLI ARGKEAHERWQLEFEAWAQREPERKALLDRLLAQQLPDGWDADLPNWEPRSKELATRAASGAVLSAIGPKLPELWGGSAD LAGSNNTTIKDVDSFGPPSISTDEYTAHWYGRTLHFGVREHAMGAILSGIVLHGPTRAYGGTFLQFSDYMRPSVRLASLM DIDTIYVWTHDSVGLGEDGPTHQPIEHLAALRAIPRLSVVRPADANETAYAWRTILARGANSGPVGLILTRQSVPVLEGT NTEGVARGGYVLGDGGSSEAKEPDVILIATGSEVQLAVAAQKLLADKDIIVRVVSMPCVEWFESQPYEYRDSVLPPSVSA RVAVEAGVAQCWHKLVGDTGKIVSIEHYGESADYQTLFREYGFTPEAVVAAAEQVLDN
Specific function: Unknown
COG id: COG0021
COG function: function code G; Transketolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transketolase family
Homologues:
Organism=Homo sapiens, GI205277463, Length=591, Percent_Identity=25.3807106598985, Blast_Score=145, Evalue=1e-34, Organism=Homo sapiens, GI4507521, Length=591, Percent_Identity=25.3807106598985, Blast_Score=145, Evalue=1e-34, Organism=Homo sapiens, GI133778974, Length=596, Percent_Identity=23.1543624161074, Blast_Score=108, Evalue=2e-23, Organism=Escherichia coli, GI1788808, Length=676, Percent_Identity=44.8224852071006, Blast_Score=536, Evalue=1e-153, Organism=Escherichia coli, GI48994911, Length=676, Percent_Identity=43.7869822485207, Blast_Score=531, Evalue=1e-152, Organism=Caenorhabditis elegans, GI17539652, Length=536, Percent_Identity=26.4925373134328, Blast_Score=129, Evalue=6e-30, Organism=Saccharomyces cerevisiae, GI6325331, Length=682, Percent_Identity=45.1612903225806, Blast_Score=556, Evalue=1e-159, Organism=Saccharomyces cerevisiae, GI6319593, Length=684, Percent_Identity=42.8362573099415, Blast_Score=517, Evalue=1e-147, Organism=Drosophila melanogaster, GI45551847, Length=601, Percent_Identity=25.1247920133111, Blast_Score=139, Evalue=9e-33, Organism=Drosophila melanogaster, GI45550715, Length=601, Percent_Identity=25.1247920133111, Blast_Score=139, Evalue=9e-33, Organism=Drosophila melanogaster, GI24645119, Length=579, Percent_Identity=24.8704663212435, Blast_Score=122, Evalue=1e-27, Organism=Drosophila melanogaster, GI24666278, Length=595, Percent_Identity=24.2016806722689, Blast_Score=118, Evalue=1e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): TKT_MYCLE (P46708)
Other databases:
- EMBL: U00013 - EMBL: Z99125 - EMBL: AL583919 - PIR: S72772 - RefSeq: NP_301494.1 - ProteinModelPortal: P46708 - SMR: P46708 - EnsemblBacteria: EBMYCT00000029009 - GeneID: 910090 - GenomeReviews: AL450380_GR - KEGG: mle:ML0583 - NMPDR: fig|272631.1.peg.366 - Leproma: ML0583 - GeneTree: EBGT00050000016270 - HOGENOM: HBG565885 - OMA: ISIEHYG - ProtClustDB: PRK05899 - BioCyc: MLEP272631:ML0583-MONOMER - BRENDA: 2.2.1.1 - InterPro: IPR009014 - InterPro: IPR015941 - InterPro: IPR005475 - InterPro: IPR005478 - InterPro: IPR020826 - InterPro: IPR005476 - InterPro: IPR005474 - Gene3D: G3DSA:3.40.50.920 - PANTHER: PTHR11624:SF1 - SMART: SM00861 - TIGRFAMs: TIGR00232
Pfam domain/function: PF02779 Transket_pyr; PF02780 Transketolase_C; PF00456 Transketolase_N; SSF52922 Transketo_C_like
EC number: =2.2.1.1
Molecular weight: Translated: 75642; Mature: 75511
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: PS00801 TRANSKETOLASE_1; PS00802 TRANSKETOLASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTLDQISTLTQPRHPDDWTEIDSAAVDTIRVLATDAVQKAGNGHPGTAMSLAPLAYTLF CCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH QRTLRHDPNDTAWLGRDRFVLSAGHSSLTLYIQLYLGGFGLELSDIESLRTWGSTTPGHP HHHHCCCCCCCEEECCCEEEEECCCCCEEEEEEEEECCCCCCHHHHHHHHHCCCCCCCCC EFRHTKGVEITTGPLGQGLASAVGMAMASRYERGLFDPDAEPGASPFDHYIYVIASDGDI CCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCC EEGVTSEASSLAAVQQLGNLIVFYDHNQISIEGDTKITLCEDTAARYRAYGWHVQEVEGG CCCCHHHHHHHHHHHHHCCEEEEEECCEEEECCCCEEEEECCHHHHHHHCCCEEEEECCC ENVVGIEEAIANAKAATDRPSFISLRTIIGYPAPTLINTGKAHGAALGEDEVAATKRILG CCEEEHHHHHHCCCCCCCCCCEEEEHHHHCCCCCHHEECCCCCCCCCCCHHHHHHHHHHC FDPDKTFAVREDVITHTRGLIARGKEAHERWQLEFEAWAQREPERKALLDRLLAQQLPDG CCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHEEEHHHHHCCCCHHHHHHHHHHHHHCCCC WDADLPNWEPRSKELATRAASGAVLSAIGPKLPELWGGSADLAGSNNTTIKDVDSFGPPS CCCCCCCCCCCHHHHHHHHHCCCHHHHHCCCCHHHCCCCCCCCCCCCCEEEEHHCCCCCC ISTDEYTAHWYGRTLHFGVREHAMGAILSGIVLHGPTRAYGGTFLQFSDYMRPSVRLASL CCCCCEEEEECCCEEECCHHHHHHHHHHHHHHCCCCCHHCCCEEEEEHHHCCCHHHHHHH MDIDTIYVWTHDSVGLGEDGPTHQPIEHLAALRAIPRLSVVRPADANETAYAWRTILARG CCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHCC ANSGPVGLILTRQSVPVLEGTNTEGVARGGYVLGDGGSSEAKEPDVILIATGSEVQLAVA CCCCCEEEEEECCCCCEEECCCCCCEECCCEEEECCCCCCCCCCCEEEEECCCCEEHHHH AQKLLADKDIIVRVVSMPCVEWFESQPYEYRDSVLPPSVSARVAVEAGVAQCWHKLVGDT HHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCEEEHHHHHHHHHHHHHCCC GKIVSIEHYGESADYQTLFREYGFTPEAVVAAAEQVLDN CCEEEEEECCCCCHHHHHHHHHCCCHHHHHHHHHHHHCC >Mature Secondary Structure TTLDQISTLTQPRHPDDWTEIDSAAVDTIRVLATDAVQKAGNGHPGTAMSLAPLAYTLF CCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH QRTLRHDPNDTAWLGRDRFVLSAGHSSLTLYIQLYLGGFGLELSDIESLRTWGSTTPGHP HHHHCCCCCCCEEECCCEEEEECCCCCEEEEEEEEECCCCCCHHHHHHHHHCCCCCCCCC EFRHTKGVEITTGPLGQGLASAVGMAMASRYERGLFDPDAEPGASPFDHYIYVIASDGDI CCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCC EEGVTSEASSLAAVQQLGNLIVFYDHNQISIEGDTKITLCEDTAARYRAYGWHVQEVEGG CCCCHHHHHHHHHHHHHCCEEEEEECCEEEECCCCEEEEECCHHHHHHHCCCEEEEECCC ENVVGIEEAIANAKAATDRPSFISLRTIIGYPAPTLINTGKAHGAALGEDEVAATKRILG CCEEEHHHHHHCCCCCCCCCCEEEEHHHHCCCCCHHEECCCCCCCCCCCHHHHHHHHHHC FDPDKTFAVREDVITHTRGLIARGKEAHERWQLEFEAWAQREPERKALLDRLLAQQLPDG CCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHEEEHHHHHCCCCHHHHHHHHHHHHHCCCC WDADLPNWEPRSKELATRAASGAVLSAIGPKLPELWGGSADLAGSNNTTIKDVDSFGPPS CCCCCCCCCCCHHHHHHHHHCCCHHHHHCCCCHHHCCCCCCCCCCCCCEEEEHHCCCCCC ISTDEYTAHWYGRTLHFGVREHAMGAILSGIVLHGPTRAYGGTFLQFSDYMRPSVRLASL CCCCCEEEEECCCEEECCHHHHHHHHHHHHHHCCCCCHHCCCEEEEEHHHCCCHHHHHHH MDIDTIYVWTHDSVGLGEDGPTHQPIEHLAALRAIPRLSVVRPADANETAYAWRTILARG CCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHCC ANSGPVGLILTRQSVPVLEGTNTEGVARGGYVLGDGGSSEAKEPDVILIATGSEVQLAVA CCCCCEEEEEECCCCCEEECCCCCCEECCCEEEECCCCCCCCCCCEEEEECCCCEEHHHH AQKLLADKDIIVRVVSMPCVEWFESQPYEYRDSVLPPSVSARVAVEAGVAQCWHKLVGDT HHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCEEEHHHHHHHHHHHHHCCC GKIVSIEHYGESADYQTLFREYGFTPEAVVAAAEQVLDN CCEEEEEECCCCCHHHHHHHHHCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11234002