| Definition | Mycobacterium leprae Br4923 chromosome, complete genome. |
|---|---|
| Accession | NC_011896 |
| Length | 3,268,071 |
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The map label for this gene is lpqE
Identifier: 221229561
GI number: 221229561
Start: 409451
End: 410002
Strand: Reverse
Name: lpqE
Synonym: MLBr_00319
Alternate gene names: 221229561
Gene position: 410002-409451 (Counterclockwise)
Preceding gene: 221229568
Following gene: 221229558
Centisome position: 12.55
GC content: 58.15
Gene sequence:
>552_bases GTGAGCCGCTTCAAGATCAGCCTTCCCGCGCTGGCTACCCGGGTCGCCGTCCTAGGCTTTTTGACTTTGATGGCCTCGGT GCTTGGCGGTTGCGGAGCAGGCCAGATCTCGCAAACCGCGACCCAGGAACCGGCCGTCAACGGCAACCGGGTCACACTCA ACAATCTGGCATTACGCGACATACGCATCCAAGCCGCGCAGACCGGTGACTTCCTCCAATCGGGCCGAACGGTGGACTTG ATGCTGGTGGCCATCAATAATTCTCCGTATGTCACAGACCGGCTAGTGTCCATCACCAGTGACATCGGCACGGTAGCACT GAACGGCTATACCCAACTGCCCACCAACGGGATGCTGTTCATCGGCACATCCGAAGGGCAGAGAATAAAACCGCCCCCCC TCCAGTCTAACAACATCGCTAAAGCAATCGTAACCTTGGCCAAGCCCATCACCAACGGCCTCACCTACAACTTTACCTTC AACTTCGAGAAGGCTGGACAAGCCAACGTGGCTGTACCGGTCTCGGCCGGACTCGCACCACGGCAGACCTAA
Upstream 100 bases:
>100_bases TCTTAAACCTACCTAATGTATATTCCTCACTACTGTGCATAGTTGCATAGTTGAGCCGCTGTCCTAATGCCTTGACCAGT ATCCCAGCAGGAGGCAGTCA
Downstream 100 bases:
>100_bases ACAGCTCTAACCACTAGTAAACCGTCTCCACATTTAGGCTATCGTATCACCCCGATACGGTCATCGTATAGCTATTATGC ATTCGGACGTACCCCCTGCT
Product: putative lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 183; Mature: 182
Protein sequence:
>183_residues MSRFKISLPALATRVAVLGFLTLMASVLGGCGAGQISQTATQEPAVNGNRVTLNNLALRDIRIQAAQTGDFLQSGRTVDL MLVAINNSPYVTDRLVSITSDIGTVALNGYTQLPTNGMLFIGTSEGQRIKPPPLQSNNIAKAIVTLAKPITNGLTYNFTF NFEKAGQANVAVPVSAGLAPRQT
Sequences:
>Translated_183_residues MSRFKISLPALATRVAVLGFLTLMASVLGGCGAGQISQTATQEPAVNGNRVTLNNLALRDIRIQAAQTGDFLQSGRTVDL MLVAINNSPYVTDRLVSITSDIGTVALNGYTQLPTNGMLFIGTSEGQRIKPPPLQSNNIAKAIVTLAKPITNGLTYNFTF NFEKAGQANVAVPVSAGLAPRQT >Mature_182_residues SRFKISLPALATRVAVLGFLTLMASVLGGCGAGQISQTATQEPAVNGNRVTLNNLALRDIRIQAAQTGDFLQSGRTVDLM LVAINNSPYVTDRLVSITSDIGTVALNGYTQLPTNGMLFIGTSEGQRIKPPPLQSNNIAKAIVTLAKPITNGLTYNFTFN FEKAGQANVAVPVSAGLAPRQT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): LPQE_MYCLE (Q9ZBM7)
Other databases:
- EMBL: AL035159 - EMBL: AL583918 - PIR: T44723 - RefSeq: NP_301346.1 - EnsemblBacteria: EBMYCT00000028768 - GeneID: 909986 - GenomeReviews: AL450380_GR - KEGG: mle:ML0319 - NMPDR: fig|272631.1.peg.218 - Leproma: ML0319 - GeneTree: EBGT00050000016304 - HOGENOM: HBG565049 - OMA: PGGNAVL - ProtClustDB: CLSK792579 - BioCyc: MLEP272631:ML0319-MONOMER
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19274; Mature: 19143
Theoretical pI: Translated: 10.53; Mature: 10.53
Prosite motif: PS51257 PROKAR_LIPOPROTEIN; PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRFKISLPALATRVAVLGFLTLMASVLGGCGAGQISQTATQEPAVNGNRVTLNNLALRD CCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCEEEEE IRIQAAQTGDFLQSGRTVDLMLVAINNSPYVTDRLVSITSDIGTVALNGYTQLPTNGMLF EEEEECCCCHHHHCCCEEEEEEEEECCCCCCHHHHHHHHCCCCEEEECCEEECCCCCEEE IGTSEGQRIKPPPLQSNNIAKAIVTLAKPITNGLTYNFTFNFEKAGQANVAVPVSAGLAP EECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEEEEEECCCCCCCEEEEECCCCCC RQT CCC >Mature Secondary Structure SRFKISLPALATRVAVLGFLTLMASVLGGCGAGQISQTATQEPAVNGNRVTLNNLALRD CCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCEEEEE IRIQAAQTGDFLQSGRTVDLMLVAINNSPYVTDRLVSITSDIGTVALNGYTQLPTNGMLF EEEEECCCCHHHHCCCEEEEEEEEECCCCCCHHHHHHHHCCCCEEEECCEEECCCCCEEE IGTSEGQRIKPPPLQSNNIAKAIVTLAKPITNGLTYNFTFNFEKAGQANVAVPVSAGLAP EECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEEEEEECCCCCCCEEEEECCCCCC RQT CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11234002