Click here to switch to the map view.

The map label for this gene is lpqT

Identifier: 221229520

GI number: 221229520

Start: 322415

End: 323071

Strand: Reverse

Name: lpqT

Synonym: MLBr_00246

Alternate gene names: 221229520

Gene position: 323071-322415 (Counterclockwise)

Preceding gene: 221229521

Following gene: 221229519

Centisome position: 9.89

GC content: 57.99

Gene sequence:

>657_bases
ATGCAGGCAATCCGTCTCGGGCTGCACACCGCTGCCGCGGTAGTCACGCTGAGCATATCCGCGGTCTCCTGCGGGACGAA
AACCCCTGACTACCAATTAATCCTGTCGAAAAGTTCTACAACCACTACGACCACACCCGACAAGCCCATCCCTTTGCCGC
AATATCTGGAAAGTATCGGCGTCACCGGGCAGCAGGTGGCGCCGAGCTCCCTGCCCGGTCTGACCGTGTCGATACCGACC
CCACCGGGCTGGTCGCCGTATAGCAATCCGAACATCACACCGGAGACGCTGATCATCGCCAAAAGCGGCAAGTACCCGAC
GGCAAGGCTCGTAGCGTTCAAGCTGCGCGGAGACTTCGACCCAACCCAAGTCATCAAACACGGGAACGACGATGCCCAAC
TCTTCGAGAACTTCAGGCAGCTGGACGTTTCGACGGCAAACTACAACGGTTTTCCGTCGGCAATGATCCAAGGCAGCTAT
GACCTCGAGGGCAGGCGACTACATGCCTGGAACCGAATCGTGATCCCCACCGGTCCACCACCCTCTAAGCAACAGTATCT
CGTTCAGCTCACCATTACCAGCTTGGCCAACGAGGCGGTCGCACAATCAAACGATATCGAGGCTATCATCCGCGGCTTTG
TCGTCGCCCCCAAGTAA

Upstream 100 bases:

>100_bases
TGTCGTCACGCCGAAGGGCGCCCGGCAGGCTAAGCCGATCGACGCGGTACACGAAATTCGGTGAAAGCCTCCAGCGACGA
TGCAGAACGAAGCGACGATG

Downstream 100 bases:

>100_bases
TTCCGGCCCAAAGCAGTCGCGGCTGCTTCCACGCCACGGCGGTTAGATCCTTGACGCCCGCAGCTGATGAACTACCTGGG
CCCCAGCCAGAAGGGACAAA

Product: putative lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 218; Mature: 218

Protein sequence:

>218_residues
MQAIRLGLHTAAAVVTLSISAVSCGTKTPDYQLILSKSSTTTTTTPDKPIPLPQYLESIGVTGQQVAPSSLPGLTVSIPT
PPGWSPYSNPNITPETLIIAKSGKYPTARLVAFKLRGDFDPTQVIKHGNDDAQLFENFRQLDVSTANYNGFPSAMIQGSY
DLEGRRLHAWNRIVIPTGPPPSKQQYLVQLTITSLANEAVAQSNDIEAIIRGFVVAPK

Sequences:

>Translated_218_residues
MQAIRLGLHTAAAVVTLSISAVSCGTKTPDYQLILSKSSTTTTTTPDKPIPLPQYLESIGVTGQQVAPSSLPGLTVSIPT
PPGWSPYSNPNITPETLIIAKSGKYPTARLVAFKLRGDFDPTQVIKHGNDDAQLFENFRQLDVSTANYNGFPSAMIQGSY
DLEGRRLHAWNRIVIPTGPPPSKQQYLVQLTITSLANEAVAQSNDIEAIIRGFVVAPK
>Mature_218_residues
MQAIRLGLHTAAAVVTLSISAVSCGTKTPDYQLILSKSSTTTTTTPDKPIPLPQYLESIGVTGQQVAPSSLPGLTVSIPT
PPGWSPYSNPNITPETLIIAKSGKYPTARLVAFKLRGDFDPTQVIKHGNDDAQLFENFRQLDVSTANYNGFPSAMIQGSY
DLEGRRLHAWNRIVIPTGPPPSKQQYLVQLTITSLANEAVAQSNDIEAIIRGFVVAPK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): LPQT_MYCLE (Q9CD47)

Other databases:

- EMBL:   AL583917
- PIR:   F86939
- RefSeq:   NP_301305.1
- ProteinModelPortal:   Q9CD47
- EnsemblBacteria:   EBMYCT00000028015
- GeneID:   908727
- GenomeReviews:   AL450380_GR
- KEGG:   mle:ML0246
- NMPDR:   fig|272631.1.peg.177
- Leproma:   ML0246
- GeneTree:   EBGT00050000014985
- HOGENOM:   HBG569806
- OMA:   YLVQFTV
- ProtClustDB:   CLSK790893
- BioCyc:   MLEP272631:ML0246-MONOMER
- InterPro:   IPR019674

Pfam domain/function: PF10738 Lpp-LpqN

EC number: NA

Molecular weight: Translated: 23456; Mature: 23456

Theoretical pI: Translated: 8.95; Mature: 8.95

Prosite motif: PS51257 PROKAR_LIPOPROTEIN; PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQAIRLGLHTAAAVVTLSISAVSCGTKTPDYQLILSKSSTTTTTTPDKPIPLPQYLESIG
CCCEEEHHHHHEEEEEEEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHC
VTGQQVAPSSLPGLTVSIPTPPGWSPYSNPNITPETLIIAKSGKYPTARLVAFKLRGDFD
CCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEEEEECCCCC
PTQVIKHGNDDAQLFENFRQLDVSTANYNGFPSAMIQGSYDLEGRRLHAWNRIVIPTGPP
HHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCHHEEECCCCCCCCEEECCCEEEECCCCC
PSKQQYLVQLTITSLANEAVAQSNDIEAIIRGFVVAPK
CCCCEEEEEEEEHHHHHHHHHCCCCHHHHHHCEEECCC
>Mature Secondary Structure
MQAIRLGLHTAAAVVTLSISAVSCGTKTPDYQLILSKSSTTTTTTPDKPIPLPQYLESIG
CCCEEEHHHHHEEEEEEEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHC
VTGQQVAPSSLPGLTVSIPTPPGWSPYSNPNITPETLIIAKSGKYPTARLVAFKLRGDFD
CCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEEEEECCCCC
PTQVIKHGNDDAQLFENFRQLDVSTANYNGFPSAMIQGSYDLEGRRLHAWNRIVIPTGPP
HHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCHHEEECCCCCCCCEEECCCEEEECCCCC
PSKQQYLVQLTITSLANEAVAQSNDIEAIIRGFVVAPK
CCCCEEEEEEEEHHHHHHHHHCCCCHHHHHHCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11234002