| Definition | Mycobacterium leprae Br4923 chromosome, complete genome. |
|---|---|
| Accession | NC_011896 |
| Length | 3,268,071 |
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The map label for this gene is ppa [H]
Identifier: 221229491
GI number: 221229491
Start: 281558
End: 282046
Strand: Reverse
Name: ppa [H]
Synonym: MLBr_00210
Alternate gene names: 221229491
Gene position: 282046-281558 (Counterclockwise)
Preceding gene: 221229496
Following gene: 221229488
Centisome position: 8.63
GC content: 58.08
Gene sequence:
>489_bases GTGCAATTCGACGTGACCATCGAAATTCCGAAAGGCCAGCGGAACAAGTACGAGGTCGACCACAAAACGGGGCGGGTGCG TCTAGACCGCTACCTTTACACCCCGATGGCCTATCCGACAGACTACGGCTTCATTGAAGACACCCTCGGCGAAGACGGCG ACCCGCTGGATGCACTGGTGCTGCTACCGGAGCCGCTGTTCCCTGGCGTACTAGTGGAGGCACGTCCAGTAGGTATGTTC CGGATGGTCGACGAGCACGGCGGCGACGACAAGGTGTTGTGCGTTCCAGTCAACGACCACCGATGGGATCACATCCACGG CATCATCGATGTTCCGACCTTCGAGCTGGACGCGATCAAGCATTTCTTCGTACACTACAAGGATCTAGAGCCAGGCAAGT TCGTGAAAGCCGCAGACTGGGTAGGCCGAGACGAAGCTGAAGCAGAAGTGCAGCGTTCAGTGGAACGGTTCAAGGCTGGC GGGCACTGA
Upstream 100 bases:
>100_bases TTGTGCCGAGCCAGCCTTCAGACCAACGTCGTCGGCTAGGGTGAACTCCGCAACGTAACCGATCTACCCGGGCCTAGCTA AGATTTAAGGAGCCGACACG
Downstream 100 bases:
>100_bases CACGGATTTCGCGACGAGCTGAAGATCGTTGCTGGAGTGCTCGCCGATGCCCGGTGGCATCCTAGCCACGTGACCCCAAT GTTGCATTTCGCTGCGACTT
Product: putative inorganic pyrophosphatase
Products: NA
Alternate protein names: Pyrophosphate phospho-hydrolase; PPase [H]
Number of amino acids: Translated: 162; Mature: 162
Protein sequence:
>162_residues MQFDVTIEIPKGQRNKYEVDHKTGRVRLDRYLYTPMAYPTDYGFIEDTLGEDGDPLDALVLLPEPLFPGVLVEARPVGMF RMVDEHGGDDKVLCVPVNDHRWDHIHGIIDVPTFELDAIKHFFVHYKDLEPGKFVKAADWVGRDEAEAEVQRSVERFKAG GH
Sequences:
>Translated_162_residues MQFDVTIEIPKGQRNKYEVDHKTGRVRLDRYLYTPMAYPTDYGFIEDTLGEDGDPLDALVLLPEPLFPGVLVEARPVGMF RMVDEHGGDDKVLCVPVNDHRWDHIHGIIDVPTFELDAIKHFFVHYKDLEPGKFVKAADWVGRDEAEAEVQRSVERFKAG GH >Mature_162_residues MQFDVTIEIPKGQRNKYEVDHKTGRVRLDRYLYTPMAYPTDYGFIEDTLGEDGDPLDALVLLPEPLFPGVLVEARPVGMF RMVDEHGGDDKVLCVPVNDHRWDHIHGIIDVPTFELDAIKHFFVHYKDLEPGKFVKAADWVGRDEAEAEVQRSVERFKAG GH
Specific function: Unknown
COG id: COG0221
COG function: function code C; Inorganic pyrophosphatase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PPase family [H]
Homologues:
Organism=Escherichia coli, GI1790673, Length=157, Percent_Identity=45.859872611465, Blast_Score=136, Evalue=7e-34,
Paralogues:
None
Copy number: 5480 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 500 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 200 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008162 [H]
Pfam domain/function: PF00719 Pyrophosphatase [H]
EC number: =3.6.1.1 [H]
Molecular weight: Translated: 18533; Mature: 18533
Theoretical pI: Translated: 4.81; Mature: 4.81
Prosite motif: PS00387 PPASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQFDVTIEIPKGQRNKYEVDHKTGRVRLDRYLYTPMAYPTDYGFIEDTLGEDGDPLDALV CCEEEEEECCCCCCCCEEECCCCCEEEEEEEEECCCCCCCCCCCCHHHCCCCCCCCEEEE LLPEPLFPGVLVEARPVGMFRMVDEHGGDDKVLCVPVNDHRWDHIHGIIDVPTFELDAIK EECCCCCCCEEEECCCCCEEEEECCCCCCCCEEEEECCCCCCCEEEEEEECCCCHHHHHH HFFVHYKDLEPGKFVKAADWVGRDEAEAEVQRSVERFKAGGH HHHHEECCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHCCCC >Mature Secondary Structure MQFDVTIEIPKGQRNKYEVDHKTGRVRLDRYLYTPMAYPTDYGFIEDTLGEDGDPLDALV CCEEEEEECCCCCCCCEEECCCCCEEEEEEEEECCCCCCCCCCCCHHHCCCCCCCCEEEE LLPEPLFPGVLVEARPVGMFRMVDEHGGDDKVLCVPVNDHRWDHIHGIIDVPTFELDAIK EECCCCCCCEEEECCCCCEEEEECCCCCCCCEEEEECCCCCCCEEEEEEECCCCHHHHHH HFFVHYKDLEPGKFVKAADWVGRDEAEAEVQRSVERFKAGGH HHHHEECCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]