| Definition | Mycobacterium leprae Br4923 chromosome, complete genome. |
|---|---|
| Accession | NC_011896 |
| Length | 3,268,071 |
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The map label for this gene is aftA
Identifier: 221229419
GI number: 221229419
Start: 147487
End: 149385
Strand: Reverse
Name: aftA
Synonym: MLBr_00107
Alternate gene names: 221229419
Gene position: 149385-147487 (Counterclockwise)
Preceding gene: 221229420
Following gene: 221229418
Centisome position: 4.57
GC content: 62.66
Gene sequence:
>1899_bases ATGCGCAATGCACTGGCCAGCTTCGGCCAGATTGTGTTGGCCGCCGTGGTGGCGAGCGGAGTGGCTGCAGTGTCGCTGAT TGCCATTGCCCGGGTACATTGGCCAGCTTTTCCATCATCCAACCAGCTGCATGCACTAACTACCGTCGGCCAGGTTGGTT GCCTGACCGGGCTGCTGGCCGTTGGCGGGGTGTGGCAGGCAGGGCGATTCCGGCGCCTCGCGCAACTCGGTGGGCTGGTG TTCGTGTCTGCCTTCACCGTCGTGACGCTAGGCATGCCGCTAGGAGCCACCAAGCTATATCTATTCGGCATCTCCGTCGA CCAACAGTTCCGCACCGAATATCTGACCAGGCTCACCGACAGCGCTGCCCTGCAAGACATGACATATCTAGGGCTGCCGC CTTTCTACCCGCCGGGCTGGTTCTGGATCGGCGGCCGCGTCGCAGCGCTGACAGGAACCCCAGCCTGGGAAATATTCAAG CCGTGGGCAATCACGTCCATCACTATCGCGGTCGCCATCACGCTGGTGCTGTGGTGGCAGATGATCCGCTTCGAATACGC CCTGCTAGTCACCATCGCCACCGCGGCAGTAACACTGGTCTACAGCTCGCCGGAACCCTACGCCGCAATGATCACGGTGC TGCTGCCGCCCGCTCTGGTTCTGACGTGGTCGGGTTTGCGTGCCGCGGAGCGTGAGGCTGACCGTACGCTTGGTAATAAA CGAGGGTGGGCCACGGTAGTCGGCGCCGGCATTTTCCTCGGCTTCGCCGCCACCTGGTATACGCTGCTGCTGGCCTACAC CGCTTTCACGGTGGTGCTGATGACCCTGCTGCTGGCCACGGCGCTCTGCCGCCGTGCAGGTTTCCGGGCGACCTTCGACC CGCTGCGCCGGCTGGCCGGCATCGTCGTCATTGCGGCGGCCATCGGGGCCATCACCTGGCTGCCGTTCTTGGCCCGGGCA GCCCATGACCCGGTCAGCGACACCGGCAGCGCCCAGCACTACCTGCCAGCCGACGGCGCCGAACTCGCCTTCCCGATGCT GCAGTTCTCTCTGCTTGGGATGATCTGCATGCTGGGTACCCTGTGGCTGATAGTACGCACGAGCTCGTCGGTGCGGGCTA GTGCACTAATGATCAGCGTGCTGGCCGTCTACCTGTGGTCACTGCTGTCGATTCTGACCACATTGGCGCGCACCACGCTG CTGTCGTTCCGACTACAACCAACACTGACCGTGCTCCTAGTGACCGCCGGCGTGTTCGGGTTCATCGAAACTGCTCAATC GTTAGCCAAGCACAACCGCGCCGTACTCTCGGTCGCCAGCGCCATCGGACTGGCAGGGGCAATCGCGTTCAGCCAAGACA TCCCCAACGTGCTGCGCCCGGATCTCACCATTGCTTACACCGACACCGACGGCCACGGCCAGCGCGGAGATCGGCGGCCA CCGGGCTCCGAAAAATACTACTGGGCCATCGACGAGGCCGTCCTGCACATCACCGGTAAACCACGCGATCAGACTGTCGT GCTTACCGCCGACTACAGCTTTCTGGCTTACTATCCTTACTGGGGCTTTCAGGGATTGACATCGCACTACGCCAACCCGC TGGCGCAATTCGACCTGCGAGCAGCACAAATTCAGCAATGGTCCAGGCTGACGACGGCCAGCGAGCTTATCCATGCACTG GACACGCTGCCCTGGCCGCCGCCGACGGTATTCGTCATGCGCCACGGCGCAGGTAACACCTACACCTTGCGATTAGCCAA GAACGTGTACCCCAACCAGCCCAACGTACGCCGCTATACCGTCGACCTGCCGGCGGCACTCTTCGCGGACCAGCGTTTCG CTGTACAAGACATCGGCCCGTTTGTGCTAGCCATCCGCAAGCCGATGGGTAACGCCTGA
Upstream 100 bases:
>100_bases AAGGTAAGGAATTGGTTTGGGCACCAGCAACATTCCGTTATGTGATGATGGTGTTACGACACATCCCGCGAAGCATCTTC CGCAAACTACCAATCTGACC
Downstream 100 bases:
>100_bases TGGCTATAGACACCGCGTCTGACGCGATCCAACAACTAGCCCAATCGCCTTGTTCTCCCCCACAAATCAAGTAGTAACCC CACCTCGCTCCGCAGCGGGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 632; Mature: 632
Protein sequence:
>632_residues MRNALASFGQIVLAAVVASGVAAVSLIAIARVHWPAFPSSNQLHALTTVGQVGCLTGLLAVGGVWQAGRFRRLAQLGGLV FVSAFTVVTLGMPLGATKLYLFGISVDQQFRTEYLTRLTDSAALQDMTYLGLPPFYPPGWFWIGGRVAALTGTPAWEIFK PWAITSITIAVAITLVLWWQMIRFEYALLVTIATAAVTLVYSSPEPYAAMITVLLPPALVLTWSGLRAAEREADRTLGNK RGWATVVGAGIFLGFAATWYTLLLAYTAFTVVLMTLLLATALCRRAGFRATFDPLRRLAGIVVIAAAIGAITWLPFLARA AHDPVSDTGSAQHYLPADGAELAFPMLQFSLLGMICMLGTLWLIVRTSSSVRASALMISVLAVYLWSLLSILTTLARTTL LSFRLQPTLTVLLVTAGVFGFIETAQSLAKHNRAVLSVASAIGLAGAIAFSQDIPNVLRPDLTIAYTDTDGHGQRGDRRP PGSEKYYWAIDEAVLHITGKPRDQTVVLTADYSFLAYYPYWGFQGLTSHYANPLAQFDLRAAQIQQWSRLTTASELIHAL DTLPWPPPTVFVMRHGAGNTYTLRLAKNVYPNQPNVRRYTVDLPAALFADQRFAVQDIGPFVLAIRKPMGNA
Sequences:
>Translated_632_residues MRNALASFGQIVLAAVVASGVAAVSLIAIARVHWPAFPSSNQLHALTTVGQVGCLTGLLAVGGVWQAGRFRRLAQLGGLV FVSAFTVVTLGMPLGATKLYLFGISVDQQFRTEYLTRLTDSAALQDMTYLGLPPFYPPGWFWIGGRVAALTGTPAWEIFK PWAITSITIAVAITLVLWWQMIRFEYALLVTIATAAVTLVYSSPEPYAAMITVLLPPALVLTWSGLRAAEREADRTLGNK RGWATVVGAGIFLGFAATWYTLLLAYTAFTVVLMTLLLATALCRRAGFRATFDPLRRLAGIVVIAAAIGAITWLPFLARA AHDPVSDTGSAQHYLPADGAELAFPMLQFSLLGMICMLGTLWLIVRTSSSVRASALMISVLAVYLWSLLSILTTLARTTL LSFRLQPTLTVLLVTAGVFGFIETAQSLAKHNRAVLSVASAIGLAGAIAFSQDIPNVLRPDLTIAYTDTDGHGQRGDRRP PGSEKYYWAIDEAVLHITGKPRDQTVVLTADYSFLAYYPYWGFQGLTSHYANPLAQFDLRAAQIQQWSRLTTASELIHAL DTLPWPPPTVFVMRHGAGNTYTLRLAKNVYPNQPNVRRYTVDLPAALFADQRFAVQDIGPFVLAIRKPMGNA >Mature_632_residues MRNALASFGQIVLAAVVASGVAAVSLIAIARVHWPAFPSSNQLHALTTVGQVGCLTGLLAVGGVWQAGRFRRLAQLGGLV FVSAFTVVTLGMPLGATKLYLFGISVDQQFRTEYLTRLTDSAALQDMTYLGLPPFYPPGWFWIGGRVAALTGTPAWEIFK PWAITSITIAVAITLVLWWQMIRFEYALLVTIATAAVTLVYSSPEPYAAMITVLLPPALVLTWSGLRAAEREADRTLGNK RGWATVVGAGIFLGFAATWYTLLLAYTAFTVVLMTLLLATALCRRAGFRATFDPLRRLAGIVVIAAAIGAITWLPFLARA AHDPVSDTGSAQHYLPADGAELAFPMLQFSLLGMICMLGTLWLIVRTSSSVRASALMISVLAVYLWSLLSILTTLARTTL LSFRLQPTLTVLLVTAGVFGFIETAQSLAKHNRAVLSVASAIGLAGAIAFSQDIPNVLRPDLTIAYTDTDGHGQRGDRRP PGSEKYYWAIDEAVLHITGKPRDQTVVLTADYSFLAYYPYWGFQGLTSHYANPLAQFDLRAAQIQQWSRLTTASELIHAL DTLPWPPPTVFVMRHGAGNTYTLRLAKNVYPNQPNVRRYTVDLPAALFADQRFAVQDIGPFVLAIRKPMGNA
Specific function: Involved in cell wall arabinan biosynthesis. Catalyzes the addition of the first key arabinofuranosyl residue from the sugar donor beta-D-arabinofuranosyl-1-monophosphoryldecaprenol to the galactan domain of the cell wall, thus 'priming' the galactan for
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 85 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): AFTA_MYCLE (Q9CDA6)
Other databases:
- EMBL: AL583917 - PIR: C86922 - RefSeq: NP_301204.1 - ProteinModelPortal: Q9CDA6 - EnsemblBacteria: EBMYCT00000028387 - GeneID: 908341 - GenomeReviews: AL450380_GR - KEGG: mle:ML0107 - NMPDR: fig|272631.1.peg.76 - Leproma: ML0107 - GeneTree: EBGT00070000032260 - HOGENOM: HBG429582 - OMA: AEDVYPN - ProtClustDB: CLSK792726 - BioCyc: MLEP272631:ML0107-MONOMER - InterPro: IPR020959 - InterPro: IPR020963
Pfam domain/function: PF12249 AftA_C; PF12250 AftA_N
EC number: NA
Molecular weight: Translated: 68651; Mature: 68651
Theoretical pI: Translated: 9.88; Mature: 9.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x21e0a03c)-; HASH(0x21c8acac)-; HASH(0x21dfcb74)-; HASH(0x22377754)-; HASH(0x21df1b50)-; HASH(0x2211cfe0)-; HASH(0x2249a594)-; HASH(0x22165fa8)-; HASH(0x224adff4)-; HASH(0x2241afdc)-; HASH(0x21dfa8f8)-; HASH(0x21dcc118)-; HASH(0x224a3d44)-;
Cys/Met content:
0.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRNALASFGQIVLAAVVASGVAAVSLIAIARVHWPAFPSSNQLHALTTVGQVGCLTGLLA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHH VGGVWQAGRFRRLAQLGGLVFVSAFTVVTLGMPLGATKLYLFGISVDQQFRTEYLTRLTD HCCCCCHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHH SAALQDMTYLGLPPFYPPGWFWIGGRVAALTGTPAWEIFKPWAITSITIAVAITLVLWWQ HHHHHHHHHCCCCCCCCCCEEEECCEEEEEECCCCHHHCCCHHHHHHHHHHHHHHHHHHH MIRFEYALLVTIATAAVTLVYSSPEPYAAMITVLLPPALVLTWSGLRAAEREADRTLGNK HHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHCCHHHEEECCCHHHHHHHHHHCCCC RGWATVVGAGIFLGFAATWYTLLLAYTAFTVVLMTLLLATALCRRAGFRATFDPLRRLAG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH IVVIAAAIGAITWLPFLARAAHDPVSDTGSAQHYLPADGAELAFPMLQFSLLGMICMLGT HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH LWLIVRTSSSVRASALMISVLAVYLWSLLSILTTLARTTLLSFRLQPTLTVLLVTAGVFG HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH FIETAQSLAKHNRAVLSVASAIGLAGAIAFSQDIPNVLRPDLTIAYTDTDGHGQRGDRRP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCEEEEECCCCCCCCCCCCC PGSEKYYWAIDEAVLHITGKPRDQTVVLTADYSFLAYYPYWGFQGLTSHYANPLAQFDLR CCCCCEEEEECEEEEEEECCCCCCEEEEEECCCEEEECCCCCCHHHHHHHCCHHHHHHHH AAQIQQWSRLTTASELIHALDTLPWPPPTVFVMRHGAGNTYTLRLAKNVYPNQPNVRRYT HHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCEEEE VDLPAALFADQRFAVQDIGPFVLAIRKPMGNA EECCHHHHHCCCHHHHHCCHHHHHEECCCCCH >Mature Secondary Structure MRNALASFGQIVLAAVVASGVAAVSLIAIARVHWPAFPSSNQLHALTTVGQVGCLTGLLA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHH VGGVWQAGRFRRLAQLGGLVFVSAFTVVTLGMPLGATKLYLFGISVDQQFRTEYLTRLTD HCCCCCHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHH SAALQDMTYLGLPPFYPPGWFWIGGRVAALTGTPAWEIFKPWAITSITIAVAITLVLWWQ HHHHHHHHHCCCCCCCCCCEEEECCEEEEEECCCCHHHCCCHHHHHHHHHHHHHHHHHHH MIRFEYALLVTIATAAVTLVYSSPEPYAAMITVLLPPALVLTWSGLRAAEREADRTLGNK HHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHCCHHHEEECCCHHHHHHHHHHCCCC RGWATVVGAGIFLGFAATWYTLLLAYTAFTVVLMTLLLATALCRRAGFRATFDPLRRLAG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH IVVIAAAIGAITWLPFLARAAHDPVSDTGSAQHYLPADGAELAFPMLQFSLLGMICMLGT HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH LWLIVRTSSSVRASALMISVLAVYLWSLLSILTTLARTTLLSFRLQPTLTVLLVTAGVFG HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH FIETAQSLAKHNRAVLSVASAIGLAGAIAFSQDIPNVLRPDLTIAYTDTDGHGQRGDRRP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCEEEEECCCCCCCCCCCCC PGSEKYYWAIDEAVLHITGKPRDQTVVLTADYSFLAYYPYWGFQGLTSHYANPLAQFDLR CCCCCEEEEECEEEEEEECCCCCCEEEEEECCCEEEECCCCCCHHHHHHHCCHHHHHHHH AAQIQQWSRLTTASELIHALDTLPWPPPTVFVMRHGAGNTYTLRLAKNVYPNQPNVRRYT HHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCEEEE VDLPAALFADQRFAVQDIGPFVLAIRKPMGNA EECCHHHHHCCCHHHHHCCHHHHHEECCCCCH
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11234002