| Definition | Mycobacterium leprae Br4923 chromosome, complete genome. |
|---|---|
| Accession | NC_011896 |
| Length | 3,268,071 |
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The map label for this gene is glf [H]
Identifier: 221229405
GI number: 221229405
Start: 114157
End: 115398
Strand: Direct
Name: glf [H]
Synonym: MLBr_00092
Alternate gene names: 221229405
Gene position: 114157-115398 (Clockwise)
Preceding gene: 221229403
Following gene: 221229406
Centisome position: 3.49
GC content: 57.97
Gene sequence:
>1242_bases ATGACCGTTAGTTTTGATCTCTTCGTTGTTGGCTCGGGGTTTTTCGGCCTGACAATTGCCGAGCGTGTGGCGACCCAGCT AGGCAAGCGTGTGCTTATTGTCGAGAAGCGTCCGCATATCGGTGGTAACGCCTATTCCGAAGCCGAGCCGCAGACCGGCA TCGAAGTTCACAAGTACGGTGCCCACCTGTTCCATACCTCTAGTAAGAGAGTGTGGGACTACGTGCGGCAGTTCACTGAG TTCACCGACTACCGGCACCGGGTTTTCGCGGTGCACAACGGGCAGGTATACCAGTTTCCGATGGGACTGGGTCTGGTGTC GCAATTCTTCGGCAGGTACTTCACTCCTGACGAAGCGCGACAGCTGATTGCCGAGCAGGCCTCTGAAATTGATACGGCGG ATGCAAAGACCCTTGAAGAGAAAGCTATATCACTGATTGGCCGGCCGCTCTATGAGGCGTTTGTCAAGGGATACACGGCA AAGCAATGGCAGACCGACCCCGCCGAGCTTCCGGCTGCCGTGATTAGTCGGCTGCCGGTGCGCTACACCTTTGACAACCG ATACTTCAGCGACATCTACGAGGGCCTGCCGGTCGACGGTTACACGGCATGGTGCACGAAGATGGCCGACGACGACCGCA TCGAAGTAAGGTTTGGCACCGACTGGTTCGATGTTGCCGATCAACTGCGTGCCGACAGCCTCGGAGCCCCGGTTGTTTAC ACCGGCCCGCTGGACCGCTACTTTGACTACGCTGCAGGCCGCCTCGGCTGGCGGACCCTGGACTTCGAGGTGGAAGTGCT ACCTATCGGTGACTTTCAGGGGACGCCGGTGATGAACTACAGTGATCTCGATGTGCCTTTCACGCGCATACACGAGTTTC GTCACTTCCACCGCGAGCGCCATTACCCGATTGACAAGACGGTGATAATGCGGGAGTACTCCCGCTTCGCGGGGTATGAC GATGAACCCTACTATCCTATCAACACTGAGGCCGACCGCGCCATGTTGGCAGCCTATCGGGCCAAGGCTAAGTCTGAGAC GGCGTCGTCGAAGGTACTGTTCGGCGGGCGGCTGGGTACCTACCAATATTTGGATATGCATATGGCCATTGCCGCCGCGT TGAACATGTACGATAACATCCTTGCACCGCACCTGCGTGACGGTTCTCCCCTGATGGAGGAACCAGCGGTAGCTGCTGCA CAGCACGCAGCGCCAGCTATCGGACGGGAAGGCGGCGCGTAA
Upstream 100 bases:
>100_bases TTACTGCCGTTGTTAGCCGTTCCTGCCCGGTCGAATCACGACCAACCCGAGCCGTCACATAAGGGTTATGCCCGAAAAGG TCAGATACTCTAGGCAACCG
Downstream 100 bases:
>100_bases TGACTGCCGTGAGTCTGCTTGCCCGAGTCATTTTGCCGCGTCCGGGTGATCCTCTCGATGTCCGCAAGTTGTATTTAGTG GAGTCGATCACCAACGCTCG
Product: putative UDP-galactopyranose mutase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 413; Mature: 412
Protein sequence:
>413_residues MTVSFDLFVVGSGFFGLTIAERVATQLGKRVLIVEKRPHIGGNAYSEAEPQTGIEVHKYGAHLFHTSSKRVWDYVRQFTE FTDYRHRVFAVHNGQVYQFPMGLGLVSQFFGRYFTPDEARQLIAEQASEIDTADAKTLEEKAISLIGRPLYEAFVKGYTA KQWQTDPAELPAAVISRLPVRYTFDNRYFSDIYEGLPVDGYTAWCTKMADDDRIEVRFGTDWFDVADQLRADSLGAPVVY TGPLDRYFDYAAGRLGWRTLDFEVEVLPIGDFQGTPVMNYSDLDVPFTRIHEFRHFHRERHYPIDKTVIMREYSRFAGYD DEPYYPINTEADRAMLAAYRAKAKSETASSKVLFGGRLGTYQYLDMHMAIAAALNMYDNILAPHLRDGSPLMEEPAVAAA QHAAPAIGREGGA
Sequences:
>Translated_413_residues MTVSFDLFVVGSGFFGLTIAERVATQLGKRVLIVEKRPHIGGNAYSEAEPQTGIEVHKYGAHLFHTSSKRVWDYVRQFTE FTDYRHRVFAVHNGQVYQFPMGLGLVSQFFGRYFTPDEARQLIAEQASEIDTADAKTLEEKAISLIGRPLYEAFVKGYTA KQWQTDPAELPAAVISRLPVRYTFDNRYFSDIYEGLPVDGYTAWCTKMADDDRIEVRFGTDWFDVADQLRADSLGAPVVY TGPLDRYFDYAAGRLGWRTLDFEVEVLPIGDFQGTPVMNYSDLDVPFTRIHEFRHFHRERHYPIDKTVIMREYSRFAGYD DEPYYPINTEADRAMLAAYRAKAKSETASSKVLFGGRLGTYQYLDMHMAIAAALNMYDNILAPHLRDGSPLMEEPAVAAA QHAAPAIGREGGA >Mature_412_residues TVSFDLFVVGSGFFGLTIAERVATQLGKRVLIVEKRPHIGGNAYSEAEPQTGIEVHKYGAHLFHTSSKRVWDYVRQFTEF TDYRHRVFAVHNGQVYQFPMGLGLVSQFFGRYFTPDEARQLIAEQASEIDTADAKTLEEKAISLIGRPLYEAFVKGYTAK QWQTDPAELPAAVISRLPVRYTFDNRYFSDIYEGLPVDGYTAWCTKMADDDRIEVRFGTDWFDVADQLRADSLGAPVVYT GPLDRYFDYAAGRLGWRTLDFEVEVLPIGDFQGTPVMNYSDLDVPFTRIHEFRHFHRERHYPIDKTVIMREYSRFAGYDD EPYYPINTEADRAMLAAYRAKAKSETASSKVLFGGRLGTYQYLDMHMAIAAALNMYDNILAPHLRDGSPLMEEPAVAAAQ HAAPAIGREGGA
Specific function: Involved in the conversion of UDP-GalP into UDP-GalF through a 2-keto intermediate [H]
COG id: COG0562
COG function: function code M; UDP-galactopyranose mutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788348, Length=378, Percent_Identity=43.1216931216931, Blast_Score=317, Evalue=6e-88,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002937 - InterPro: IPR016040 - InterPro: IPR004379 - InterPro: IPR015899 [H]
Pfam domain/function: PF01593 Amino_oxidase; PF03275 GLF [H]
EC number: =5.4.99.9 [H]
Molecular weight: Translated: 46781; Mature: 46650
Theoretical pI: Translated: 5.59; Mature: 5.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVSFDLFVVGSGFFGLTIAERVATQLGKRVLIVEKRPHIGGNAYSEAEPQTGIEVHKYG CEEEEEEEEEECCCHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCCCCCEECC AHLFHTSSKRVWDYVRQFTEFTDYRHRVFAVHNGQVYQFPMGLGLVSQFFGRYFTPDEAR CCEEECCCHHHHHHHHHHHHHHCCCEEEEEEECCEEEEECCCHHHHHHHHCCCCCHHHHH QLIAEQASEIDTADAKTLEEKAISLIGRPLYEAFVKGYTAKQWQTDPAELPAAVISRLPV HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCE RYTFDNRYFSDIYEGLPVDGYTAWCTKMADDDRIEVRFGTDWFDVADQLRADSLGAPVVY EEEECCCHHHHHHCCCCCCCHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHCCCCCCEEE TGPLDRYFDYAAGRLGWRTLDFEVEVLPIGDFQGTPVMNYSDLDVPFTRIHEFRHFHRER ECCHHHHHHHHHCCCCCEEEEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC HYPIDKTVIMREYSRFAGYDDEPYYPINTEADRAMLAAYRAKAKSETASSKVLFGGRLGT CCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCC YQYLDMHMAIAAALNMYDNILAPHLRDGSPLMEEPAVAAAQHAAPAIGREGGA HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCHHHHHHHHCCCCCCCCCC >Mature Secondary Structure TVSFDLFVVGSGFFGLTIAERVATQLGKRVLIVEKRPHIGGNAYSEAEPQTGIEVHKYG EEEEEEEEEECCCHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCCCCCEECC AHLFHTSSKRVWDYVRQFTEFTDYRHRVFAVHNGQVYQFPMGLGLVSQFFGRYFTPDEAR CCEEECCCHHHHHHHHHHHHHHCCCEEEEEEECCEEEEECCCHHHHHHHHCCCCCHHHHH QLIAEQASEIDTADAKTLEEKAISLIGRPLYEAFVKGYTAKQWQTDPAELPAAVISRLPV HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCE RYTFDNRYFSDIYEGLPVDGYTAWCTKMADDDRIEVRFGTDWFDVADQLRADSLGAPVVY EEEECCCHHHHHHCCCCCCCHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHCCCCCCEEE TGPLDRYFDYAAGRLGWRTLDFEVEVLPIGDFQGTPVMNYSDLDVPFTRIHEFRHFHRER ECCHHHHHHHHHCCCCCEEEEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC HYPIDKTVIMREYSRFAGYDDEPYYPINTEADRAMLAAYRAKAKSETASSKVLFGGRLGT CCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCC YQYLDMHMAIAAALNMYDNILAPHLRDGSPLMEEPAVAAAQHAAPAIGREGGA HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8752339 [H]