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The map label for this gene is yitU [H]

Identifier: 221229403

GI number: 221229403

Start: 110356

End: 111201

Strand: Direct

Name: yitU [H]

Synonym: MLBr_00089

Alternate gene names: 221229403

Gene position: 110356-111201 (Clockwise)

Preceding gene: 221229402

Following gene: 221229405

Centisome position: 3.38

GC content: 64.42

Gene sequence:

>846_bases
GTGACCGATACGACTAGGCCGGCTCCAACGCCGACCCAGCCAACGCTTATAGCCTGTGACGTTGACGGCACGTTGCTCGA
TGAGAACGAGACTGTAACCGCGCGTACCCGCGCCGCTGTACGCTCCGCCGTGGCCGGCGGAGCGTATTTCGTCTTGGCCA
CGGGCCGCCCGCCGCGTTGGGTGCGGCCGGTCGTCGACGCACTTGGTTTCCCGCCGATGGCGGTGTGTGCCAACGGTGCC
GTGATATACGATCCTGCGACCGATCGGGTGGTATCGGCGCGCACGCTGGCCGTTGACATCCTAGGCGAGTTGGTCGAGAT
CGCAACGCGCGTCATCCCTGGCGCGGGTCTGGCTGTCGAGCGTGTCGGTGATCGCGCCCATGACAGCGCTACCCCACAGT
TCGTCAGCTCGGTGGGTTACGAGCATGCGTGGCTCCACCCGGACAACACTGAGGTGTCGATCGAAGATCTGCTTAGCGTT
CCGGCTATCAAGCTCCTGATCCGCAAGTCCGGTGCCCGCAGTGCGGATATGGCTGCCGAACTAGCCAAGCATGTCGGGAT
TGCGGGCGACATAACCTACTCCACCAACAACGGTCTAGTGGAGATCCTGCCGCTGGGAATCAGCAAGGCCACCGGCGTCG
AAGAGGTTGGACGGCCGCTAGGGATCGCGGATGGCAACGCGGCGGCTTTCGGCGACATGCCCAACGACGTTCCGATGCTG
CTACGGGCGGGTCACGGCGTGGCGATGGGTAATGCGCATCCCGCCGTGCTGGCCGCCGCTGACGAGATCACCGCCCCCAA
TACCGATGACGGTGTTGCCCGGGTGTTGGAACGCTGGTGGAGCTAA

Upstream 100 bases:

>100_bases
GAGGCTCCCAAAGCCGGGACCGACGGTGTGACGCCACTGGGCCATAGCCAAAGTGGCTCACGCTGATCACCCCTAACTGG
CTGCGGGGCGGTTTGTCTCA

Downstream 100 bases:

>100_bases
CCCACTTGCCAGTGGATCTAGAAGTCATACGCAGCCTCGGTTGTGGGAGACTGTCTGTGTTCTGGCATGCTGCCTTAACG
TCCCGGTGGACCGCCAGTGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 281; Mature: 280

Protein sequence:

>281_residues
MTDTTRPAPTPTQPTLIACDVDGTLLDENETVTARTRAAVRSAVAGGAYFVLATGRPPRWVRPVVDALGFPPMAVCANGA
VIYDPATDRVVSARTLAVDILGELVEIATRVIPGAGLAVERVGDRAHDSATPQFVSSVGYEHAWLHPDNTEVSIEDLLSV
PAIKLLIRKSGARSADMAAELAKHVGIAGDITYSTNNGLVEILPLGISKATGVEEVGRPLGIADGNAAAFGDMPNDVPML
LRAGHGVAMGNAHPAVLAAADEITAPNTDDGVARVLERWWS

Sequences:

>Translated_281_residues
MTDTTRPAPTPTQPTLIACDVDGTLLDENETVTARTRAAVRSAVAGGAYFVLATGRPPRWVRPVVDALGFPPMAVCANGA
VIYDPATDRVVSARTLAVDILGELVEIATRVIPGAGLAVERVGDRAHDSATPQFVSSVGYEHAWLHPDNTEVSIEDLLSV
PAIKLLIRKSGARSADMAAELAKHVGIAGDITYSTNNGLVEILPLGISKATGVEEVGRPLGIADGNAAAFGDMPNDVPML
LRAGHGVAMGNAHPAVLAAADEITAPNTDDGVARVLERWWS
>Mature_280_residues
TDTTRPAPTPTQPTLIACDVDGTLLDENETVTARTRAAVRSAVAGGAYFVLATGRPPRWVRPVVDALGFPPMAVCANGAV
IYDPATDRVVSARTLAVDILGELVEIATRVIPGAGLAVERVGDRAHDSATPQFVSSVGYEHAWLHPDNTEVSIEDLLSVP
AIKLLIRKSGARSADMAAELAKHVGIAGDITYSTNNGLVEILPLGISKATGVEEVGRPLGIADGNAAAFGDMPNDVPMLL
RAGHGVAMGNAHPAVLAAADEITAPNTDDGVARVLERWWS

Specific function: Unknown

COG id: COG0561

COG function: function code R; Predicted hydrolases of the HAD superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. Cof family [H]

Homologues:

Organism=Escherichia coli, GI2367265, Length=276, Percent_Identity=29.7101449275362, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI48994981, Length=272, Percent_Identity=26.8382352941176, Blast_Score=79, Evalue=2e-16,
Organism=Escherichia coli, GI87081790, Length=280, Percent_Identity=29.2857142857143, Blast_Score=77, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023214
- InterPro:   IPR013200
- InterPro:   IPR006379
- InterPro:   IPR000150 [H]

Pfam domain/function: PF08282 Hydrolase_3 [H]

EC number: NA

Molecular weight: Translated: 29291; Mature: 29160

Theoretical pI: Translated: 4.66; Mature: 4.66

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDTTRPAPTPTQPTLIACDVDGTLLDENETVTARTRAAVRSAVAGGAYFVLATGRPPRW
CCCCCCCCCCCCCCEEEEEECCCEEECCCCEEHHHHHHHHHHHHCCCEEEEEECCCCCHH
VRPVVDALGFPPMAVCANGAVIYDPATDRVVSARTLAVDILGELVEIATRVIPGAGLAVE
HHHHHHHHCCCCHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
RVGDRAHDSATPQFVSSVGYEHAWLHPDNTEVSIEDLLSVPAIKLLIRKSGARSADMAAE
HHCCCCCCCCCHHHHHHCCCCEEEECCCCCCEEHHHHHHHHHHHHHHHHCCCCHHHHHHH
LAKHVGIAGDITYSTNNGLVEILPLGISKATGVEEVGRPLGIADGNAAAFGDMPNDVPML
HHHHCCCCEEEEEECCCCEEEEEECCCCCCCCHHHHCCCCCCCCCCCEECCCCCCCHHHH
LRAGHGVAMGNAHPAVLAAADEITAPNTDDGVARVLERWWS
HCCCCCEEECCCCCEEEEECCCCCCCCCCHHHHHHHHHHCC
>Mature Secondary Structure 
TDTTRPAPTPTQPTLIACDVDGTLLDENETVTARTRAAVRSAVAGGAYFVLATGRPPRW
CCCCCCCCCCCCCEEEEEECCCEEECCCCEEHHHHHHHHHHHHCCCEEEEEECCCCCHH
VRPVVDALGFPPMAVCANGAVIYDPATDRVVSARTLAVDILGELVEIATRVIPGAGLAVE
HHHHHHHHCCCCHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
RVGDRAHDSATPQFVSSVGYEHAWLHPDNTEVSIEDLLSVPAIKLLIRKSGARSADMAAE
HHCCCCCCCCCHHHHHHCCCCEEEECCCCCCEEHHHHHHHHHHHHHHHHCCCCHHHHHHH
LAKHVGIAGDITYSTNNGLVEILPLGISKATGVEEVGRPLGIADGNAAAFGDMPNDVPML
HHHHCCCCEEEEEECCCCEEEEEECCCCCCCCHHHHCCCCCCCCCCCEECCCCCCCHHHH
LRAGHGVAMGNAHPAVLAAADEITAPNTDDGVARVLERWWS
HCCCCCEEECCCCCEEEEECCCCCCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9353931; 9025291; 9384377 [H]