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The map label for this gene is sodA [H]

Identifier: 221229395

GI number: 221229395

Start: 92674

End: 93297

Strand: Reverse

Name: sodA [H]

Synonym: MLBr_00072

Alternate gene names: 221229395

Gene position: 93297-92674 (Counterclockwise)

Preceding gene: 221229400

Following gene: 221229394

Centisome position: 2.85

GC content: 53.85

Gene sequence:

>624_bases
GTGGCTGAATACACCCTGCCCGATTTGGACTGGGACTACGCAGCGCTGGAACCACATATCTCTGGTGAGATCAACGAGAT
CCACCACACCAAGCACCACGCCGCATATGTCAAAGGTGTCAATGACGCGCTTGCCAAACTTGACGAGGCACGCGCCAAAG
ACGACCACTCCGCGATTTTTCTGAACGAGAAGAACCTGGCCTTTCATTTGGGCGGCCACGTCAACCACTCCATCTGGTGG
AAGAACCTCTCTCCGAACGGTGGCGATAAGCCGACCGGCGGGCTAGCCACTGACATTGATGAAACGTTTGGGTCGTTCGA
CAAATTCCGCGCTCAATTCAGCGCGGCCGCCAATGGCCTGCAAGGGTCAGGTTGGGCAGTACTCGGCTACGACACGCTCG
GCAACAAGCTGCTTACATTCCAGCTGTATGACCAACAGGCCAACGTCTCACTCGGCATCATTCCCTTGTTGCAGGTCGAC
ATGTGGGAACATGCTTTTTACCTGCAATACAAAAACGTCAAGGCGGATTACGTCAAAGCGTTTTGGAATGTCGTAAACTG
GGCGGATGTGCAGTCACGTTACATGGCTGCAACATCTAAGACGCAGGGACTGATATTCGACTGA

Upstream 100 bases:

>100_bases
CGCGCGATCATGGCGCAGCGTTGATTATGCTAGTCGCTGCGCGGATCAACCGTGCGAGTGAGCGTCAGACGATCACCAAT
CAATCAAAGGAAGGAACGTC

Downstream 100 bases:

>100_bases
TTCCATCTTAGTCAGGTTTGGGCGTCGCGCGATTCGCGCGACGCCCTTGCTTTTAGCGGCCCTTTAATTCGGGTACTTGG
TAAACGCGGGCACAGGTGGT

Product: superoxide dismutase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 207; Mature: 206

Protein sequence:

>207_residues
MAEYTLPDLDWDYAALEPHISGEINEIHHTKHHAAYVKGVNDALAKLDEARAKDDHSAIFLNEKNLAFHLGGHVNHSIWW
KNLSPNGGDKPTGGLATDIDETFGSFDKFRAQFSAAANGLQGSGWAVLGYDTLGNKLLTFQLYDQQANVSLGIIPLLQVD
MWEHAFYLQYKNVKADYVKAFWNVVNWADVQSRYMAATSKTQGLIFD

Sequences:

>Translated_207_residues
MAEYTLPDLDWDYAALEPHISGEINEIHHTKHHAAYVKGVNDALAKLDEARAKDDHSAIFLNEKNLAFHLGGHVNHSIWW
KNLSPNGGDKPTGGLATDIDETFGSFDKFRAQFSAAANGLQGSGWAVLGYDTLGNKLLTFQLYDQQANVSLGIIPLLQVD
MWEHAFYLQYKNVKADYVKAFWNVVNWADVQSRYMAATSKTQGLIFD
>Mature_206_residues
AEYTLPDLDWDYAALEPHISGEINEIHHTKHHAAYVKGVNDALAKLDEARAKDDHSAIFLNEKNLAFHLGGHVNHSIWWK
NLSPNGGDKPTGGLATDIDETFGSFDKFRAQFSAAANGLQGSGWAVLGYDTLGNKLLTFQLYDQQANVSLGIIPLLQVDM
WEHAFYLQYKNVKADYVKAFWNVVNWADVQSRYMAATSKTQGLIFD

Specific function: Destroys radicals which are normally produced within the cells and which are toxic to biological systems [H]

COG id: COG0605

COG function: function code P; Superoxide dismutase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the iron/manganese superoxide dismutase family [H]

Homologues:

Organism=Homo sapiens, GI67782307, Length=196, Percent_Identity=51.530612244898, Blast_Score=210, Evalue=8e-55,
Organism=Homo sapiens, GI67782305, Length=196, Percent_Identity=51.530612244898, Blast_Score=210, Evalue=8e-55,
Organism=Homo sapiens, GI67782309, Length=196, Percent_Identity=41.3265306122449, Blast_Score=151, Evalue=5e-37,
Organism=Escherichia coli, GI1790342, Length=214, Percent_Identity=39.2523364485981, Blast_Score=137, Evalue=4e-34,
Organism=Escherichia coli, GI1787946, Length=193, Percent_Identity=37.8238341968912, Blast_Score=123, Evalue=8e-30,
Organism=Caenorhabditis elegans, GI17506561, Length=197, Percent_Identity=45.1776649746193, Blast_Score=178, Evalue=1e-45,
Organism=Caenorhabditis elegans, GI17569479, Length=196, Percent_Identity=43.8775510204082, Blast_Score=167, Evalue=3e-42,
Organism=Saccharomyces cerevisiae, GI6321796, Length=205, Percent_Identity=46.8292682926829, Blast_Score=184, Evalue=8e-48,
Organism=Drosophila melanogaster, GI17136812, Length=196, Percent_Identity=43.3673469387755, Blast_Score=178, Evalue=2e-45,

Paralogues:

None

Copy number: 2980 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001189
- InterPro:   IPR019833
- InterPro:   IPR019832
- InterPro:   IPR019831 [H]

Pfam domain/function: PF02777 Sod_Fe_C; PF00081 Sod_Fe_N [H]

EC number: =1.15.1.1 [H]

Molecular weight: Translated: 23158; Mature: 23027

Theoretical pI: Translated: 5.73; Mature: 5.73

Prosite motif: PS00088 SOD_MN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEYTLPDLDWDYAALEPHISGEINEIHHTKHHAAYVKGVNDALAKLDEARAKDDHSAIF
CCCCCCCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCEEE
LNEKNLAFHLGGHVNHSIWWKNLSPNGGDKPTGGLATDIDETFGSFDKFRAQFSAAANGL
EECCCEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHCHHHHHHHHHHHHHCCC
QGSGWAVLGYDTLGNKLLTFQLYDQQANVSLGIIPLLQVDMWEHAFYLQYKNVKADYVKA
CCCCEEEEEECCCCCEEEEEEEECCCCCCEEEEEEEEEEHHHCEEEEEEECCCCHHHHHH
FWNVVNWADVQSRYMAATSKTQGLIFD
HHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
AEYTLPDLDWDYAALEPHISGEINEIHHTKHHAAYVKGVNDALAKLDEARAKDDHSAIF
CCCCCCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCEEE
LNEKNLAFHLGGHVNHSIWWKNLSPNGGDKPTGGLATDIDETFGSFDKFRAQFSAAANGL
EECCCEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHCHHHHHHHHHHHHHCCC
QGSGWAVLGYDTLGNKLLTFQLYDQQANVSLGIIPLLQVDMWEHAFYLQYKNVKADYVKA
CCCCEEEEEECCCCCEEEEEEEECCCCCCEEEEEEEEEEHHHCEEEEEEECCCCHHHHHH
FWNVVNWADVQSRYMAATSKTQGLIFD
HHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8692009 [H]