| Definition | Mycobacterium leprae Br4923 chromosome, complete genome. |
|---|---|
| Accession | NC_011896 |
| Length | 3,268,071 |
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The map label for this gene is 221229370
Identifier: 221229370
GI number: 221229370
Start: 35283
End: 36119
Strand: Reverse
Name: 221229370
Synonym: MLBr_00031
Alternate gene names: NA
Gene position: 36119-35283 (Counterclockwise)
Preceding gene: 221229375
Following gene: 221229369
Centisome position: 1.11
GC content: 60.81
Gene sequence:
>837_bases ATGATTCAGTCCACACAAACGTGGCGTGTGCTCGCAGGAGGTCTGGCTGCCACCGCAATGGGTGTCACTGTCTTCGCTGG CGGCACCGCCGCAGCTGATCCTTCGCCGCCAGCACCCCCACCGGCTATTCCCGGTGTTCTCCCGCCGGCATCACTGCCAC CCATACAGAGCGTCACAGCCGTTCCCGGGGGGATCACCACCAACAACAGGTTCGTCGCGACCCCGCAGGCGCCCGGACCG GCCGCCCTGGGGCAGCCACCGCTAGCGGTGGCTGCCCCAGTCTCTGAATCGCTGCACGACTACTTCAAGGCAAAAAACAT CAAGTTGGTGGCGCAAAAGCCGCATGGCTTCAAGGCGCTCGACATCACTTTGCCAGTGCCCACCCGCTGGACTCAGGTTC CGGACCCGAACGTGCCCGACGCATTCGCGGTAATCGCCGACCGGCTGGGCAATAGCCTCTACACCTCAAACGCACAGTTA GTGGTGTACAACTTGGTTGGCAACTTCGATCCCAAGGAGGCCATCACGCACGGCTTCGTCGACACTCAGCAACTGTCGGC GTGGCAGACCACCAACGCTTCCAAAGCGGATTTCGACGGTTTTCCATCATCAATCATCGAAGGTACATACCGTGAAAACG GTATGACGCTAAATACCTCACGGCGCCACGTCATCGCCAGCTCTGGGCCTGACAAATATTTAGTTTCGCTGTCTGTGACC ACTGCTCTGTCGCAAGCGGTCGCCGATGCACCGGCCACCAACGCCATCGTTAACGGCTTCCGGGTGTCCTCACCCACGGT GTCCGCCCCAGTACCTCCCCAGCTTGGCACCCGTTAG
Upstream 100 bases:
>100_bases TTCTAGCCTGTTCACGTTGCCTGACCACTAGTTACTGTCAGCCACGAACAGCAGGCAGGTGGTACCCGTGTGGTGCGGTG ATGGGGAAGGACCAACGCAA
Downstream 100 bases:
>100_bases GCTGGTGCCCTTGCCTTGGAATGCAGCCAGGCCAACCCACATACACCCAGCCTGCTGTCATTGGTACCCGGACTGTCGCC GCTACCGAACCTAGTACCAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 278; Mature: 278
Protein sequence:
>278_residues MIQSTQTWRVLAGGLAATAMGVTVFAGGTAAADPSPPAPPPAIPGVLPPASLPPIQSVTAVPGGITTNNRFVATPQAPGP AALGQPPLAVAAPVSESLHDYFKAKNIKLVAQKPHGFKALDITLPVPTRWTQVPDPNVPDAFAVIADRLGNSLYTSNAQL VVYNLVGNFDPKEAITHGFVDTQQLSAWQTTNASKADFDGFPSSIIEGTYRENGMTLNTSRRHVIASSGPDKYLVSLSVT TALSQAVADAPATNAIVNGFRVSSPTVSAPVPPQLGTR
Sequences:
>Translated_278_residues MIQSTQTWRVLAGGLAATAMGVTVFAGGTAAADPSPPAPPPAIPGVLPPASLPPIQSVTAVPGGITTNNRFVATPQAPGP AALGQPPLAVAAPVSESLHDYFKAKNIKLVAQKPHGFKALDITLPVPTRWTQVPDPNVPDAFAVIADRLGNSLYTSNAQL VVYNLVGNFDPKEAITHGFVDTQQLSAWQTTNASKADFDGFPSSIIEGTYRENGMTLNTSRRHVIASSGPDKYLVSLSVT TALSQAVADAPATNAIVNGFRVSSPTVSAPVPPQLGTR >Mature_278_residues MIQSTQTWRVLAGGLAATAMGVTVFAGGTAAADPSPPAPPPAIPGVLPPASLPPIQSVTAVPGGITTNNRFVATPQAPGP AALGQPPLAVAAPVSESLHDYFKAKNIKLVAQKPHGFKALDITLPVPTRWTQVPDPNVPDAFAVIADRLGNSLYTSNAQL VVYNLVGNFDPKEAITHGFVDTQQLSAWQTTNASKADFDGFPSSIIEGTYRENGMTLNTSRRHVIASSGPDKYLVSLSVT TALSQAVADAPATNAIVNGFRVSSPTVSAPVPPQLGTR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.tuberculosis Rv0040c
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PR28_MYCLE (O33075)
Other databases:
- EMBL: Z70722 - EMBL: Y14967 - EMBL: AL583917 - PIR: G86912 - PIR: T10019 - RefSeq: NP_301155.1 - ProteinModelPortal: O33075 - EnsemblBacteria: EBMYCT00000027940 - GeneID: 908191 - GenomeReviews: AL450380_GR - KEGG: mle:ML0031 - NMPDR: fig|272631.1.peg.27 - Leproma: ML0031 - GeneTree: EBGT00050000014985 - HOGENOM: HBG569806 - OMA: NAQVVVY - ProtClustDB: CLSK799339 - BioCyc: MLEP272631:ML0031-MONOMER - InterPro: IPR019674
Pfam domain/function: PF10738 Lpp-LpqN
EC number: NA
Molecular weight: Translated: 28789; Mature: 28789
Theoretical pI: Translated: 8.86; Mature: 8.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIQSTQTWRVLAGGLAATAMGVTVFAGGTAAADPSPPAPPPAIPGVLPPASLPPIQSVTA CCCCCCCHHHHHHHHHHHHHCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHC VPGGITTNNRFVATPQAPGPAALGQPPLAVAAPVSESLHDYFKAKNIKLVAQKPHGFKAL CCCCCCCCCEEEECCCCCCCCCCCCCCEEEECCHHHHHHHHHHHCCEEEEEECCCCCEEE DITLPVPTRWTQVPDPNVPDAFAVIADRLGNSLYTSNAQLVVYNLVGNFDPKEAITHGFV EEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCEEECCCCEEEEEECCCCCHHHHHHHCCC DTQQLSAWQTTNASKADFDGFPSSIIEGTYRENGMTLNTSRRHVIASSGPDKYLVSLSVT CHHHHHHEECCCCCCCCCCCCCHHHHCCHHCCCCEEEECCCCEEEECCCCCEEEEEEEHH TALSQAVADAPATNAIVNGFRVSSPTVSAPVPPQLGTR HHHHHHHHCCCCCHHHHCCEEECCCCCCCCCCCCCCCC >Mature Secondary Structure MIQSTQTWRVLAGGLAATAMGVTVFAGGTAAADPSPPAPPPAIPGVLPPASLPPIQSVTA CCCCCCCHHHHHHHHHHHHHCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHC VPGGITTNNRFVATPQAPGPAALGQPPLAVAAPVSESLHDYFKAKNIKLVAQKPHGFKAL CCCCCCCCCEEEECCCCCCCCCCCCCCEEEECCHHHHHHHHHHHCCEEEEEECCCCCEEE DITLPVPTRWTQVPDPNVPDAFAVIADRLGNSLYTSNAQLVVYNLVGNFDPKEAITHGFV EEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCEEECCCCEEEEEECCCCCHHHHHHHCCC DTQQLSAWQTTNASKADFDGFPSSIIEGTYRENGMTLNTSRRHVIASSGPDKYLVSLSVT CHHHHHHEECCCCCCCCCCCCCHHHHCCHHCCCCEEEECCCCEEEECCCCCEEEEEEEHH TALSQAVADAPATNAIVNGFRVSSPTVSAPVPPQLGTR HHHHHHHHCCCCCHHHHCCEEECCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11234002