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The map label for this gene is yfcH [H]

Identifier: 220919536

GI number: 220919536

Start: 4963003

End: 4963890

Strand: Direct

Name: yfcH [H]

Synonym: A2cp1_4457

Alternate gene names: 220919536

Gene position: 4963003-4963890 (Clockwise)

Preceding gene: 220919532

Following gene: 220919538

Centisome position: 98.68

GC content: 76.8

Gene sequence:

>888_bases
ATGAAGATCTTCGTCACCGGCGCGACCGGGTACATCGGCAGCGCCATCGTGTCCGCGCTCACCCGCGGAGGGCATCAGGT
CACCGGCCTCTCGAGGTCGGAGGAGAAGGACGCCGAGCTTCGCCGGCGCGGGGCCACCCCGGCCCGGGGCGCCCTCGGCC
ACGTGGGCGCGCTCGCCCGCGAGCTCGCGGCGCAGGACGCGGTGGTGCACGCCGCGGTGGACTACGGCCTGGGACCGCCG
GCCGACGCCGAGGCGGTCGAGGCGATGATCACCGCGGCCCGCGCGGCGGGCCGGCCGTTCTCGATCGTGTACACCTCCGG
CGTCTGGGTGCTGGGCGACACCGGCGGCATCGCCGACGAGCGCGCCCCCACCGATCATCCGGCGGCGGCCACGGCCTGGC
GACCGGCGCACGAGCAGCGCGTGCTGGGCGCGGCCGGCGATCGCATCGCCGCGGCGGTGATCCGCCCGGGCATGGTCTAC
GGCGGCCGGCGCGGGCTCATCACCCCGTGGTTCGACCAGGCGACGCGCGAGGGCGCTGCCACGGTCGTCGCCCCCGGCAC
GCAGCGCTGGTCGTTCGTGCACGTGGAGGACCTGGCGGAGCTGTACCGGCTGGTGGTCGAGCGGCGCGGGCAGGGCGTGT
TCCACGGGGTGGACGGGCGGCCGACGCCGGTCGCCGAGGCCGCCGCCGCGTACAGCCGCGCCGCGGGGAAGGGTGCGGTG
CGCGAGCTGCCGCTCGCCGAGGCCCGCAAGGGCATGGGCCCGATGGCGGACGCGCTCGCCATGGACCAGCAGGTGGTGAC
GGCCCGCGCCGGCGAGGTGGGGTGGACGCTCCGCCACGCCGACCTCGTGTCCACCGCCGCGGACATGTACCGGGAGTGGA
AGGGGTAG

Upstream 100 bases:

>100_bases
GCCAAGGGATTCCTGGCGCCGGGCGGGCGCGCGTCTCGCCGCCTCGACCGTTTGCGCGAGGCCGGCGCGCCCGTTAGTCC
TTCCGCCCGGAGGAGACACC

Downstream 100 bases:

>100_bases
AGGCCTTCGCACCCTTCTACTCCGTCCGCTCATCCCGACCCTTCGACTCCGGCGAGCCTGCGGCTCGCCTACGCTCAGGG
TGAGCGGGAGTTCCAGCTCG

Product: NAD-dependent epimerase/dehydratase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 295; Mature: 295

Protein sequence:

>295_residues
MKIFVTGATGYIGSAIVSALTRGGHQVTGLSRSEEKDAELRRRGATPARGALGHVGALARELAAQDAVVHAAVDYGLGPP
ADAEAVEAMITAARAAGRPFSIVYTSGVWVLGDTGGIADERAPTDHPAAATAWRPAHEQRVLGAAGDRIAAAVIRPGMVY
GGRRGLITPWFDQATREGAATVVAPGTQRWSFVHVEDLAELYRLVVERRGQGVFHGVDGRPTPVAEAAAAYSRAAGKGAV
RELPLAEARKGMGPMADALAMDQQVVTARAGEVGWTLRHADLVSTAADMYREWKG

Sequences:

>Translated_295_residues
MKIFVTGATGYIGSAIVSALTRGGHQVTGLSRSEEKDAELRRRGATPARGALGHVGALARELAAQDAVVHAAVDYGLGPP
ADAEAVEAMITAARAAGRPFSIVYTSGVWVLGDTGGIADERAPTDHPAAATAWRPAHEQRVLGAAGDRIAAAVIRPGMVY
GGRRGLITPWFDQATREGAATVVAPGTQRWSFVHVEDLAELYRLVVERRGQGVFHGVDGRPTPVAEAAAAYSRAAGKGAV
RELPLAEARKGMGPMADALAMDQQVVTARAGEVGWTLRHADLVSTAADMYREWKG
>Mature_295_residues
MKIFVTGATGYIGSAIVSALTRGGHQVTGLSRSEEKDAELRRRGATPARGALGHVGALARELAAQDAVVHAAVDYGLGPP
ADAEAVEAMITAARAAGRPFSIVYTSGVWVLGDTGGIADERAPTDHPAAATAWRPAHEQRVLGAAGDRIAAAVIRPGMVY
GGRRGLITPWFDQATREGAATVVAPGTQRWSFVHVEDLAELYRLVVERRGQGVFHGVDGRPTPVAEAAAAYSRAAGKGAV
RELPLAEARKGMGPMADALAMDQQVVTARAGEVGWTLRHADLVSTAADMYREWKG

Specific function: Unknown

COG id: COG0451

COG function: function code MG; Nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sugar epimerase family. SDR39U1 subfamily [H]

Homologues:

Organism=Escherichia coli, GI1788642, Length=312, Percent_Identity=23.7179487179487, Blast_Score=67, Evalue=2e-12,
Organism=Saccharomyces cerevisiae, GI6322972, Length=298, Percent_Identity=28.5234899328859, Blast_Score=100, Evalue=4e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013549
- InterPro:   IPR001509
- InterPro:   IPR016040
- InterPro:   IPR010099 [H]

Pfam domain/function: PF08338 DUF1731; PF01370 Epimerase [H]

EC number: NA

Molecular weight: Translated: 30889; Mature: 30889

Theoretical pI: Translated: 8.82; Mature: 8.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIFVTGATGYIGSAIVSALTRGGHQVTGLSRSEEKDAELRRRGATPARGALGHVGALAR
CEEEEECCCHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHH
ELAAQDAVVHAAVDYGLGPPADAEAVEAMITAARAAGRPFSIVYTSGVWVLGDTGGIADE
HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCEEEEECCCCCCCC
RAPTDHPAAATAWRPAHEQRVLGAAGDRIAAAVIRPGMVYGGRRGLITPWFDQATREGAA
CCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHCCCCEECCCCCCCCCHHHHHHHCCCE
TVVAPGTQRWSFVHVEDLAELYRLVVERRGQGVFHGVDGRPTPVAEAAAAYSRAAGKGAV
EEEECCCCCEEEEEHHHHHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHHCCCCHH
RELPLAEARKGMGPMADALAMDQQVVTARAGEVGWTLRHADLVSTAADMYREWKG
HHCCHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKIFVTGATGYIGSAIVSALTRGGHQVTGLSRSEEKDAELRRRGATPARGALGHVGALAR
CEEEEECCCHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHH
ELAAQDAVVHAAVDYGLGPPADAEAVEAMITAARAAGRPFSIVYTSGVWVLGDTGGIADE
HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCEEEEECCCCCCCC
RAPTDHPAAATAWRPAHEQRVLGAAGDRIAAAVIRPGMVYGGRRGLITPWFDQATREGAA
CCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHCCCCEECCCCCCCCCHHHHHHHCCCE
TVVAPGTQRWSFVHVEDLAELYRLVVERRGQGVFHGVDGRPTPVAEAAAAYSRAAGKGAV
EEEECCCCCEEEEEHHHHHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHHCCCCHH
RELPLAEARKGMGPMADALAMDQQVVTARAGEVGWTLRHADLVSTAADMYREWKG
HHCCHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]