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The map label for this gene is ybfM [H]

Identifier: 220919373

GI number: 220919373

Start: 4785374

End: 4786036

Strand: Direct

Name: ybfM [H]

Synonym: A2cp1_4294

Alternate gene names: 220919373

Gene position: 4785374-4786036 (Clockwise)

Preceding gene: 220919361

Following gene: 220919374

Centisome position: 95.15

GC content: 77.53

Gene sequence:

>663_bases
ATGGAAGCGTGGGTGGAGAGTCCCGCTTCCTTCCTCGAGCGCTGGCACTACGGCGGCCTGTTCGCGGTGATCCTGGCCGA
GGAGGCGGGCGTCCCGCTGCCGCTCCCCGGCGACCTGTTCATCGCGGCCATGGGCTTCCTCGCCCACTCGCACCGCGCCG
CCTTCCTGCCCACCGCGGCGGTGGTGACCTCGGCCACGGTGCTGGGCGCCACGGTCCTGTACCTCGTCTCGCGGCACGCC
GGGCGGCCGCTGCTGCTCCGGGTGGCGCGGCGCTTCGGCTACACCGAGGCGCGGGAGGCGCGTCTCGAGGGCTGGCTCAC
CCGGCGCGGCGCGGCGGCGGTGGTGATCGGCCGGCTCATCCCCGGGCTGCGGATCGTGATGACGGTGGTCGCGGGCGCGC
TCCGCCTGCGCCAGGGCACCTTCGTCGCCGGCACGCTGGTGGCGGGCGCGCTCTGGGCGACGATCTACTTCTGGCTCGGG
TGGGCGCTGGGCGCCGGCTACGAGCGGCTCGCGGGCGAGATCCGCCTCGAGGCGGTCTGGCCCTGGGCGGCGGCGGCCGG
GGTCCTCGCGGCGGGCGCGGTGCTCTCCTGGCGTGCGCGCCGGCGGGCCGCGGCGGCCGCCGAGGCGTCCGTCGAGAGCC
CGCCCTCCGGGACCGCCGGCTGA

Upstream 100 bases:

>100_bases
CCCTGCGATGCACCGGCCATGTCGGAAGGGGTGCGCAGGCGCGCCGGGCGCGCCAAGCCCCCGCGCGAACCGTCGCTTCC
GCGGCGGCGCGGTTCGTGGC

Downstream 100 bases:

>100_bases
GCGCGGTCCGGTGGGGCCCCCGTCGCGCCGCAGCCCCGGGCTGTCTAGGTTCGGTACGTGGGAGCCGCCGGCAACGTCGT
TCGCAGGGTGATCCTGGTGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 220; Mature: 220

Protein sequence:

>220_residues
MEAWVESPASFLERWHYGGLFAVILAEEAGVPLPLPGDLFIAAMGFLAHSHRAAFLPTAAVVTSATVLGATVLYLVSRHA
GRPLLLRVARRFGYTEAREARLEGWLTRRGAAAVVIGRLIPGLRIVMTVVAGALRLRQGTFVAGTLVAGALWATIYFWLG
WALGAGYERLAGEIRLEAVWPWAAAAGVLAAGAVLSWRARRRAAAAAEASVESPPSGTAG

Sequences:

>Translated_220_residues
MEAWVESPASFLERWHYGGLFAVILAEEAGVPLPLPGDLFIAAMGFLAHSHRAAFLPTAAVVTSATVLGATVLYLVSRHA
GRPLLLRVARRFGYTEAREARLEGWLTRRGAAAVVIGRLIPGLRIVMTVVAGALRLRQGTFVAGTLVAGALWATIYFWLG
WALGAGYERLAGEIRLEAVWPWAAAAGVLAAGAVLSWRARRRAAAAAEASVESPPSGTAG
>Mature_220_residues
MEAWVESPASFLERWHYGGLFAVILAEEAGVPLPLPGDLFIAAMGFLAHSHRAAFLPTAAVVTSATVLGATVLYLVSRHA
GRPLLLRVARRFGYTEAREARLEGWLTRRGAAAVVIGRLIPGLRIVMTVVAGALRLRQGTFVAGTLVAGALWATIYFWLG
WALGAGYERLAGEIRLEAVWPWAAAAGVLAAGAVLSWRARRRAAAAAEASVESPPSGTAG

Specific function: Unknown

COG id: COG0586

COG function: function code S; Uncharacterized membrane-associated protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dedA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 23280; Mature: 23280

Theoretical pI: Translated: 11.32; Mature: 11.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEAWVESPASFLERWHYGGLFAVILAEEAGVPLPLPGDLFIAAMGFLAHSHRAAFLPTAA
CCCHHCCHHHHHHHHCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHH
VVTSATVLGATVLYLVSRHAGRPLLLRVARRFGYTEAREARLEGWLTRRGAAAVVIGRLI
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHH
PGLRIVMTVVAGALRLRQGTFVAGTLVAGALWATIYFWLGWALGAGYERLAGEIRLEAVW
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHEEEEEC
PWAAAAGVLAAGAVLSWRARRRAAAAAEASVESPPSGTAG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MEAWVESPASFLERWHYGGLFAVILAEEAGVPLPLPGDLFIAAMGFLAHSHRAAFLPTAA
CCCHHCCHHHHHHHHCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHH
VVTSATVLGATVLYLVSRHAGRPLLLRVARRFGYTEAREARLEGWLTRRGAAAVVIGRLI
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHH
PGLRIVMTVVAGALRLRQGTFVAGTLVAGALWATIYFWLGWALGAGYERLAGEIRLEAVW
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHEEEEEC
PWAAAAGVLAAGAVLSWRARRRAAAAAEASVESPPSGTAG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]