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The map label for this gene is spmB [H]

Identifier: 220919305

GI number: 220919305

Start: 4708007

End: 4708549

Strand: Direct

Name: spmB [H]

Synonym: A2cp1_4226

Alternate gene names: 220919305

Gene position: 4708007-4708549 (Clockwise)

Preceding gene: 220919304

Following gene: 220919307

Centisome position: 93.61

GC content: 76.43

Gene sequence:

>543_bases
GTGATCCGCGGCGCGCTCGACGTCCTCTCGACCTGGGCGATCCCGGTGCTGCTGGCGGGCATCCCGGCGGTTGCGCTCGC
CCGCGGCGTGAAGGTGTATCCGGTCTTCGTCGAGGGCGCGAAGGAGGGCTTCGCGACCGCGGTGCGGATCATCCCGGCGC
TGGTCGCCATCTTCGTCGCGCTGGGGATGCTGCGCGCCTCCGGCGCCATGGAGGCCGCGGCGGCCGCGCTCGCGCCGGTC
ACCTCCGCGCTCGGCCTGCCCGCGAGCGTCCTGCCGCTCGTCCTCGTCCGGCCGCTCTCCGGCGGGGCGGCGCTCGGCGT
GGTCGGGGACGTGCTCCGGAGCGAGGGGCCGGACGGCTACGCCGGGCGGCTCGCCTCGGTGATGGCCGGCTCGACCGAGA
CGACGTTCTACGTGCTCGCGGTCTACATGGGCGCGGCGGGGATCACCCGGTACCGCCAGGCGCTCCCGGCCGCGCTGCTC
GCCGACCTGGCCGGCTTCGCCGCCGCCATCGTGACGGTGCGGCTGCTGCTCGGCGGGCCGTGA

Upstream 100 bases:

>100_bases
TCTGCGCCTCGGCCTGCGGGGTGGTGGTGGCGGTCGTCGCCGCGAAGGCGCTCCGCCGGCTCTACCTGGCGGCGGCGCCG
GCGGGCCCCGAGGCGGCGCC

Downstream 100 bases:

>100_bases
CCTACCGCGGCGCCCAGCTCGTGGTGATCCGCGCGAGCTCCTTCTCGTCCTCCTCGCGCACGATGGCGTGCGCGAACGCG
CCGGGCCCGGTGCGCGCCAG

Product: nucleoside recognition domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 180; Mature: 180

Protein sequence:

>180_residues
MIRGALDVLSTWAIPVLLAGIPAVALARGVKVYPVFVEGAKEGFATAVRIIPALVAIFVALGMLRASGAMEAAAAALAPV
TSALGLPASVLPLVLVRPLSGGAALGVVGDVLRSEGPDGYAGRLASVMAGSTETTFYVLAVYMGAAGITRYRQALPAALL
ADLAGFAAAIVTVRLLLGGP

Sequences:

>Translated_180_residues
MIRGALDVLSTWAIPVLLAGIPAVALARGVKVYPVFVEGAKEGFATAVRIIPALVAIFVALGMLRASGAMEAAAAALAPV
TSALGLPASVLPLVLVRPLSGGAALGVVGDVLRSEGPDGYAGRLASVMAGSTETTFYVLAVYMGAAGITRYRQALPAALL
ADLAGFAAAIVTVRLLLGGP
>Mature_180_residues
MIRGALDVLSTWAIPVLLAGIPAVALARGVKVYPVFVEGAKEGFATAVRIIPALVAIFVALGMLRASGAMEAAAAALAPV
TSALGLPASVLPLVLVRPLSGGAALGVVGDVLRSEGPDGYAGRLASVMAGSTETTFYVLAVYMGAAGITRYRQALPAALL
ADLAGFAAAIVTVRLLLGGP

Specific function: Involved in spore core dehydration; might be involved in the transport of something into or out of the forespore or could be required for some modification of the cortex peptidoglycan structure [H]

COG id: COG0700

COG function: function code S; Uncharacterized membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the spmB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011642 [H]

Pfam domain/function: PF07670 Gate [H]

EC number: NA

Molecular weight: Translated: 17966; Mature: 17966

Theoretical pI: Translated: 9.86; Mature: 9.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRGALDVLSTWAIPVLLAGIPAVALARGVKVYPVFVEGAKEGFATAVRIIPALVAIFVA
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHH
LGMLRASGAMEAAAAALAPVTSALGLPASVLPLVLVRPLSGGAALGVVGDVLRSEGPDGY
HHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCH
AGRLASVMAGSTETTFYVLAVYMGAAGITRYRQALPAALLADLAGFAAAIVTVRLLLGGP
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIRGALDVLSTWAIPVLLAGIPAVALARGVKVYPVFVEGAKEGFATAVRIIPALVAIFVA
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHH
LGMLRASGAMEAAAAALAPVTSALGLPASVLPLVLVRPLSGGAALGVVGDVLRSEGPDGY
HHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCH
AGRLASVMAGSTETTFYVLAVYMGAAGITRYRQALPAALLADLAGFAAAIVTVRLLLGGP
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7934829; 9384377; 1548223; 7642500 [H]