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The map label for this gene is yrbH [C]

Identifier: 220919291

GI number: 220919291

Start: 4694492

End: 4695538

Strand: Direct

Name: yrbH [C]

Synonym: A2cp1_4212

Alternate gene names: 220919291

Gene position: 4694492-4695538 (Clockwise)

Preceding gene: 220919289

Following gene: 220919292

Centisome position: 93.34

GC content: 74.02

Gene sequence:

>1047_bases
ATGGCCTCCAGCCGCAGCAGCCGGGCCCGTGTGGTGAAGCTCCCCGTGCGTCGTTCGCGGGCGAGCGCCCGCCCGCGCCC
CCGCACCCAGGATCTCGTCGCCTACGGCCGCACCGTCGTCGAGGCCGAGGCGCGCGCCATCGGCGCGGTCCCCCTCGACG
ACGCCTTCGCCACCGCCGTCCGCTGGATCCTCGGCTGCAAGGGCCGGGTGGTGGTGACGGGGATGGGCAAGCCGGGCTTC
GTGGCCCAGAAGATCTCCGCCACGCTGGCCTCCACCGGCACCCCTTCGCTCTATGTCCACCCGGCCGAGGCCGCGCACGG
CGACCTGGGCCGCATCGCGCGCGACGACCTGGTCTTCGCGCTCTCGAACTCGGGCGAGACCGAGGAGATCCTCCGGCTGC
TCCCGTCGCTCAAGAAGATCGGGGCGAAGATCGTCGCGATCACCGCCGATCGCGCCAACCGGCTGGCGCGGGCGGCGGAC
CTGGTCATCGCCATCGGGAACGTCGAGGAGGCCTGCCCCATGGGCCTCGCCCCGACCGCGTCCACCGCGGTGCTGCTGGC
GGTGGGCGACGCGATCTCGATGACGGTGCTCGCGAACCGCCCGTTCGACCGCGAGGAGTACGCGCTGTTCCACCCGGGCG
GCAAGCTCGGGCGCGGGCTGATGAAGGTGCACGAGCTGATGCGCGGCGAGAGCTCGAACCCAGTGGTGCGCGAGGACGCT
CCGCTCGCCGCCGCGGTGGCGGTGATGACCGAGACGCCCGGCCGCCCCGGCGCGACCTCGGTGGTCGCCGCCGACGGCAC
GCTGGTGGGCATCTTCACCGACGGTGACCTGCGCCGCCTGGTCGAGCACGGCGAGACCGACTTCGCGCGCCCGGTCAGCT
CCGCCATGTGCCGCGGCCCGAAGACGGTGCGCCCCGACGCGCTGGTGGTGGACGCGGCCCGCGTGCTGCGCCAGGCGCGC
ATCGACCAGGTGCCGGTGGTGGACGAGGCCGGTCGCCCGGTGGGCCTGCTCGACGTGCAGGACCTCCTCGCCGCCAAGAT
CCTCTGA

Upstream 100 bases:

>100_bases
ATGAAGAATTTCATGGTCTTCCTCCAGGGGGCCGGCGTCACATAGCGCACCCGCGCGCCCTGCCGCAAGCGCCGCGGAAG
TGCTATATCGGCGGCCGACC

Downstream 100 bases:

>100_bases
CCCCGCCGTGGCCCGCGCCCCCCGCCCGCGCGCCGTCCCTCCCCGCCCCGCGCACCGCGCGCGGAGCCTCCCGCGGGAGC
GCGCGCTCGTCTCGGCGGTG

Product: KpsF/GutQ family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 348; Mature: 347

Protein sequence:

>348_residues
MASSRSSRARVVKLPVRRSRASARPRPRTQDLVAYGRTVVEAEARAIGAVPLDDAFATAVRWILGCKGRVVVTGMGKPGF
VAQKISATLASTGTPSLYVHPAEAAHGDLGRIARDDLVFALSNSGETEEILRLLPSLKKIGAKIVAITADRANRLARAAD
LVIAIGNVEEACPMGLAPTASTAVLLAVGDAISMTVLANRPFDREEYALFHPGGKLGRGLMKVHELMRGESSNPVVREDA
PLAAAVAVMTETPGRPGATSVVAADGTLVGIFTDGDLRRLVEHGETDFARPVSSAMCRGPKTVRPDALVVDAARVLRQAR
IDQVPVVDEAGRPVGLLDVQDLLAAKIL

Sequences:

>Translated_348_residues
MASSRSSRARVVKLPVRRSRASARPRPRTQDLVAYGRTVVEAEARAIGAVPLDDAFATAVRWILGCKGRVVVTGMGKPGF
VAQKISATLASTGTPSLYVHPAEAAHGDLGRIARDDLVFALSNSGETEEILRLLPSLKKIGAKIVAITADRANRLARAAD
LVIAIGNVEEACPMGLAPTASTAVLLAVGDAISMTVLANRPFDREEYALFHPGGKLGRGLMKVHELMRGESSNPVVREDA
PLAAAVAVMTETPGRPGATSVVAADGTLVGIFTDGDLRRLVEHGETDFARPVSSAMCRGPKTVRPDALVVDAARVLRQAR
IDQVPVVDEAGRPVGLLDVQDLLAAKIL
>Mature_347_residues
ASSRSSRARVVKLPVRRSRASARPRPRTQDLVAYGRTVVEAEARAIGAVPLDDAFATAVRWILGCKGRVVVTGMGKPGFV
AQKISATLASTGTPSLYVHPAEAAHGDLGRIARDDLVFALSNSGETEEILRLLPSLKKIGAKIVAITADRANRLARAADL
VIAIGNVEEACPMGLAPTASTAVLLAVGDAISMTVLANRPFDREEYALFHPGGKLGRGLMKVHELMRGESSNPVVREDAP
LAAAVAVMTETPGRPGATSVVAADGTLVGIFTDGDLRRLVEHGETDFARPVSSAMCRGPKTVRPDALVVDAARVLRQARI
DQVPVVDEAGRPVGLLDVQDLLAAKIL

Specific function: Unknown

COG id: COG0794

COG function: function code M; Predicted sugar phosphate isomerase involved in capsule formation

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SIS domain [H]

Homologues:

Organism=Escherichia coli, GI1789588, Length=322, Percent_Identity=39.4409937888199, Blast_Score=219, Evalue=1e-58,
Organism=Escherichia coli, GI87082151, Length=323, Percent_Identity=40.2476780185758, Blast_Score=214, Evalue=6e-57,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000644
- InterPro:   IPR004800
- InterPro:   IPR001347 [H]

Pfam domain/function: PF00571 CBS; PF01380 SIS [H]

EC number: NA

Molecular weight: Translated: 36647; Mature: 36516

Theoretical pI: Translated: 10.04; Mature: 10.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASSRSSRARVVKLPVRRSRASARPRPRTQDLVAYGRTVVEAEARAIGAVPLDDAFATAV
CCCCCCCCCEEEEECCHHHHCCCCCCCCHHHHHHHCCHHEEHHHHHCCCCCCCHHHHHHH
RWILGCKGRVVVTGMGKPGFVAQKISATLASTGTPSLYVHPAEAAHGDLGRIARDDLVFA
HHHHCCCCCEEEEECCCCCHHHHHHHHHHHCCCCCEEEEECCHHCCCCHHHHHHCCEEEE
LSNSGETEEILRLLPSLKKIGAKIVAITADRANRLARAADLVIAIGNVEEACPMGLAPTA
ECCCCCHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHEEEEEECCCHHHCCCCCCCCC
STAVLLAVGDAISMTVLANRPFDREEYALFHPGGKLGRGLMKVHELMRGESSNPVVREDA
CCEEEEEECCCEEEEEEECCCCCCCCEEEECCCHHHHHHHHHHHHHHCCCCCCCEEECCC
PLAAAVAVMTETPGRPGATSVVAADGTLVGIFTDGDLRRLVEHGETDFARPVSSAMCRGP
CHHHHEEEEECCCCCCCCCEEEEECCEEEEEEECHHHHHHHHCCCCHHHHHHHHHHHCCC
KTVRPDALVVDAARVLRQARIDQVPVVDEAGRPVGLLDVQDLLAAKIL
CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECHHHHHHHHCC
>Mature Secondary Structure 
ASSRSSRARVVKLPVRRSRASARPRPRTQDLVAYGRTVVEAEARAIGAVPLDDAFATAV
CCCCCCCCEEEEECCHHHHCCCCCCCCHHHHHHHCCHHEEHHHHHCCCCCCCHHHHHHH
RWILGCKGRVVVTGMGKPGFVAQKISATLASTGTPSLYVHPAEAAHGDLGRIARDDLVFA
HHHHCCCCCEEEEECCCCCHHHHHHHHHHHCCCCCEEEEECCHHCCCCHHHHHHCCEEEE
LSNSGETEEILRLLPSLKKIGAKIVAITADRANRLARAADLVIAIGNVEEACPMGLAPTA
ECCCCCHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHEEEEEECCCHHHCCCCCCCCC
STAVLLAVGDAISMTVLANRPFDREEYALFHPGGKLGRGLMKVHELMRGESSNPVVREDA
CCEEEEEECCCEEEEEEECCCCCCCCEEEECCCHHHHHHHHHHHHHHCCCCCCCEEECCC
PLAAAVAVMTETPGRPGATSVVAADGTLVGIFTDGDLRRLVEHGETDFARPVSSAMCRGP
CHHHHEEEEECCCCCCCCCEEEEECCEEEEEEECHHHHHHHHCCCCHHHHHHHHHHHCCC
KTVRPDALVVDAARVLRQARIDQVPVVDEAGRPVGLLDVQDLLAAKIL
CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]