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The map label for this gene is pecM [H]

Identifier: 220919289

GI number: 220919289

Start: 4692783

End: 4693655

Strand: Direct

Name: pecM [H]

Synonym: A2cp1_4210

Alternate gene names: 220919289

Gene position: 4692783-4693655 (Clockwise)

Preceding gene: 220919284

Following gene: 220919291

Centisome position: 93.31

GC content: 75.72

Gene sequence:

>873_bases
ATGCCGACCTCCGTCTCCTCCCCTCGCTGGCGCGACGTGCTCCTCACGGCGGTGGCCCCCGCGATCTGGGGCTCCACCTA
CATCGTCACGACGGAGCTCCTGCCCCCGCACCGACCGTTCACGGCGGCCCTCCTCCGCGCGCTGCCGGCCGGGGTGCTGC
TGGTGCTCGTCGCGCGGCGGGTGCCCGTCCGCCGCGACTGGCCGCGCGTGCTGGTACTGGGCGCGCTCAACATCGGCGTG
TTCCAGGCGCTGCTGTTCGTGGCGGCCTACCGGCTGCCGGGCGGGCTCGCGGCGGTGCTGGGCGCAGTGCAGCCGCTGCT
GGTCATGGCGCTGGCCTGGGGGGTGGACGGCCGGGTACCGGCCCGGGCCACGCTGGCGTCCGCGGTCTCCGGGATCGGCG
GCATGGCCGTGCTGCTCCTGTCCCCGCAGACCGTCTTCGAGCCGGTGGGCATCGCCGCAGCGCTCGCGGGGGCCGCCTGC
ATGGCGGGCGGCGTGTGGCTCACGCGGCGCTGGCGCCTCGATCTGCCGGTCCTCGCGCTCACCGGCTGGCAGCTCGTCGT
CGGCGGGCTGATGCTCGCGCCGCTGGCGTGGCTGGCGGACCCGCCGCTGCCCGTGCTCTCGCGATCGCAGGTGCTGGCCT
ATGCCTACCTGAGCCTGGCCGGCGCGCTGGTCTCCTATGCGCTCTGGTTCCGCGGCGTCGCGCGGCTGCCCACGGTGGCC
GTGTCGTCGCTCGGGCTGCTGAGCCCGCTCACCGCCGTCGTGCTGGGCTGGGCGCTCCTGTCGCAGGCGATGTCGGGCGC
GTCGCTCGCGGGCATGGCGATCGTGCTCGCCAGCGTCCTCGGCGTGCAGTGGACCGCCTCGCGGACCAGGTAG

Upstream 100 bases:

>100_bases
CCACCGCGTCCCGCCGGACCGGCCCGGGGTCGCGCCCGGTCGTTTGTCTTGACTTCAAGATGTCTCCCCCGACAAATGTC
TCGACCTCAAGGTACCTCAC

Downstream 100 bases:

>100_bases
CGGCGCCCGGCGGAGGCTCCTGGCCGGTCCTCCGGATCGTCTGACGGCGCCGGGCCGCCGCGCGCCGGGGCGGCCCCGGC
GCGCGCGGCGACGCGGCTAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 290; Mature: 289

Protein sequence:

>290_residues
MPTSVSSPRWRDVLLTAVAPAIWGSTYIVTTELLPPHRPFTAALLRALPAGVLLVLVARRVPVRRDWPRVLVLGALNIGV
FQALLFVAAYRLPGGLAAVLGAVQPLLVMALAWGVDGRVPARATLASAVSGIGGMAVLLLSPQTVFEPVGIAAALAGAAC
MAGGVWLTRRWRLDLPVLALTGWQLVVGGLMLAPLAWLADPPLPVLSRSQVLAYAYLSLAGALVSYALWFRGVARLPTVA
VSSLGLLSPLTAVVLGWALLSQAMSGASLAGMAIVLASVLGVQWTASRTR

Sequences:

>Translated_290_residues
MPTSVSSPRWRDVLLTAVAPAIWGSTYIVTTELLPPHRPFTAALLRALPAGVLLVLVARRVPVRRDWPRVLVLGALNIGV
FQALLFVAAYRLPGGLAAVLGAVQPLLVMALAWGVDGRVPARATLASAVSGIGGMAVLLLSPQTVFEPVGIAAALAGAAC
MAGGVWLTRRWRLDLPVLALTGWQLVVGGLMLAPLAWLADPPLPVLSRSQVLAYAYLSLAGALVSYALWFRGVARLPTVA
VSSLGLLSPLTAVVLGWALLSQAMSGASLAGMAIVLASVLGVQWTASRTR
>Mature_289_residues
PTSVSSPRWRDVLLTAVAPAIWGSTYIVTTELLPPHRPFTAALLRALPAGVLLVLVARRVPVRRDWPRVLVLGALNIGVF
QALLFVAAYRLPGGLAAVLGAVQPLLVMALAWGVDGRVPARATLASAVSGIGGMAVLLLSPQTVFEPVGIAAALAGAACM
AGGVWLTRRWRLDLPVLALTGWQLVVGGLMLAPLAWLADPPLPVLSRSQVLAYAYLSLAGALVSYALWFRGVARLPTVAV
SSLGLLSPLTAVVLGWALLSQAMSGASLAGMAIVLASVLGVQWTASRTR

Specific function: Involved in pectinase, cellulase, and blue pigment regulation [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004779
- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 30208; Mature: 30076

Theoretical pI: Translated: 12.14; Mature: 12.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTSVSSPRWRDVLLTAVAPAIWGSTYIVTTELLPPHRPFTAALLRALPAGVLLVLVARR
CCCCCCCCHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHC
VPVRRDWPRVLVLGALNIGVFQALLFVAAYRLPGGLAAVLGAVQPLLVMALAWGVDGRVP
CCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
ARATLASAVSGIGGMAVLLLSPQTVFEPVGIAAALAGAACMAGGVWLTRRWRLDLPVLAL
HHHHHHHHHHCCCHHEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHH
TGWQLVVGGLMLAPLAWLADPPLPVLSRSQVLAYAYLSLAGALVSYALWFRGVARLPTVA
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VSSLGLLSPLTAVVLGWALLSQAMSGASLAGMAIVLASVLGVQWTASRTR
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
PTSVSSPRWRDVLLTAVAPAIWGSTYIVTTELLPPHRPFTAALLRALPAGVLLVLVARR
CCCCCCCHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHC
VPVRRDWPRVLVLGALNIGVFQALLFVAAYRLPGGLAAVLGAVQPLLVMALAWGVDGRVP
CCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
ARATLASAVSGIGGMAVLLLSPQTVFEPVGIAAALAGAACMAGGVWLTRRWRLDLPVLAL
HHHHHHHHHHCCCHHEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHH
TGWQLVVGGLMLAPLAWLADPPLPVLSRSQVLAYAYLSLAGALVSYALWFRGVARLPTVA
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VSSLGLLSPLTAVVLGWALLSQAMSGASLAGMAIVLASVLGVQWTASRTR
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8022282 [H]