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The map label for this gene is ssuC [C]

Identifier: 220919218

GI number: 220919218

Start: 4626157

End: 4626894

Strand: Direct

Name: ssuC [C]

Synonym: A2cp1_4139

Alternate gene names: 220919218

Gene position: 4626157-4626894 (Clockwise)

Preceding gene: 220919217

Following gene: 220919219

Centisome position: 91.98

GC content: 75.88

Gene sequence:

>738_bases
GTGTTCCTGGCGGGCGCGCTGCTGACGTGGGAGCTCGCGGCTAGGTTCGGGCCCTGGCCACGCTGGCTGTTCCCCGGGCC
GTTCGCGGTGGCGGACGGCATCCGCGCCATGGCGGCCGACGGGCGGCTCGGCGCCGCGGTGCTCCGGTCGCTGGGCCGGC
TGGCGCAGGGCTACGCGATCTCCATCGCGGTGGGCGTGCCGCTCGGCGTGGCGCTGGCGCGGAGCGCGCTCGTGCAGGCG
GCGCTCCGCCCCATCACCACCGGCCTGCAGGCGCTGCCGTCCATCTGCTGGCTGCCGCTGGCGGTGCTCTGGTTCGGGCT
CTCCGAGGCGGCCATCGTGTTCGTGGTGGTGATGGGCTCGCTCCTCGCGGTCTCGATCGCCACCGAGGACGCCATCGCGG
GCGTGGACCCGGTGCTCCTGCGCGCGGCCGGCACGCTGGGGATCCGCGGCCCCCGCTTCCACCTGGGCGTGCTCCTCCCG
GCCGCGCTGCCCGGGATCCTCACCGGCCTGAAGCTGGGCTGGAGCTTCGCGTGGCGCGCCCTCATGGCCGGCGAGCTGCT
GTTCGTGGCGGGCGGCCTGGGGCAGCTCCTCGCCCAGGGGCGCGAGCTCCTCGACGCCGCGCAGGTGATGGGCGTGATGG
TCTGCATCGTGGCGCTCGGGATCCTGGTGGACCGCGTGCTGTTCCGGCTGCTCGAGCTCCGCGTCCGCCGCCGCTGGGGC
CTGCTCGAGGCCGCCTGA

Upstream 100 bases:

>100_bases
TCGCGGCGAATCCGCGACGAGCTGCGCCGCGCCGACGAGTCGGGGCGCCGGACGGCGCCGGCGGAGGAGGAACACGATGC
GCGAGCGGCTCCGGACGGCG

Downstream 100 bases:

>100_bases
CCCACGACCGAGGAGGCCGCTCCCGTGCGCCGCTCCGCCCGCGCCCTCGCCGCGCTCGTCACGCTGGGTGCAACGCTCCT
CGCGGCACCGCTCGCCTGCC

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 245; Mature: 245

Protein sequence:

>245_residues
MFLAGALLTWELAARFGPWPRWLFPGPFAVADGIRAMAADGRLGAAVLRSLGRLAQGYAISIAVGVPLGVALARSALVQA
ALRPITTGLQALPSICWLPLAVLWFGLSEAAIVFVVVMGSLLAVSIATEDAIAGVDPVLLRAAGTLGIRGPRFHLGVLLP
AALPGILTGLKLGWSFAWRALMAGELLFVAGGLGQLLAQGRELLDAAQVMGVMVCIVALGILVDRVLFRLLELRVRRRWG
LLEAA

Sequences:

>Translated_245_residues
MFLAGALLTWELAARFGPWPRWLFPGPFAVADGIRAMAADGRLGAAVLRSLGRLAQGYAISIAVGVPLGVALARSALVQA
ALRPITTGLQALPSICWLPLAVLWFGLSEAAIVFVVVMGSLLAVSIATEDAIAGVDPVLLRAAGTLGIRGPRFHLGVLLP
AALPGILTGLKLGWSFAWRALMAGELLFVAGGLGQLLAQGRELLDAAQVMGVMVCIVALGILVDRVLFRLLELRVRRRWG
LLEAA
>Mature_245_residues
MFLAGALLTWELAARFGPWPRWLFPGPFAVADGIRAMAADGRLGAAVLRSLGRLAQGYAISIAVGVPLGVALARSALVQA
ALRPITTGLQALPSICWLPLAVLWFGLSEAAIVFVVVMGSLLAVSIATEDAIAGVDPVLLRAAGTLGIRGPRFHLGVLLP
AALPGILTGLKLGWSFAWRALMAGELLFVAGGLGQLLAQGRELLDAAQVMGVMVCIVALGILVDRVLFRLLELRVRRRWG
LLEAA

Specific function: Probably part of an ABC transporter complex. Probably responsible for the translocation of the substrate across the membrane (Probable) [H]

COG id: COG0600

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI87081802, Length=236, Percent_Identity=30.0847457627119, Blast_Score=86, Evalue=2e-18,
Organism=Escherichia coli, GI1786564, Length=193, Percent_Identity=30.0518134715026, Blast_Score=84, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 25726; Mature: 25726

Theoretical pI: Translated: 11.61; Mature: 11.61

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFLAGALLTWELAARFGPWPRWLFPGPFAVADGIRAMAADGRLGAAVLRSLGRLAQGYAI
CCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEE
SIAVGVPLGVALARSALVQAALRPITTGLQALPSICWLPLAVLWFGLSEAAIVFVVVMGS
EEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
LLAVSIATEDAIAGVDPVLLRAAGTLGIRGPRFHLGVLLPAALPGILTGLKLGWSFAWRA
HHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LMAGELLFVAGGLGQLLAQGRELLDAAQVMGVMVCIVALGILVDRVLFRLLELRVRRRWG
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
LLEAA
CCCCC
>Mature Secondary Structure
MFLAGALLTWELAARFGPWPRWLFPGPFAVADGIRAMAADGRLGAAVLRSLGRLAQGYAI
CCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEE
SIAVGVPLGVALARSALVQAALRPITTGLQALPSICWLPLAVLWFGLSEAAIVFVVVMGS
EEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
LLAVSIATEDAIAGVDPVLLRAAGTLGIRGPRFHLGVLLPAALPGILTGLKLGWSFAWRA
HHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LMAGELLFVAGGLGQLLAQGRELLDAAQVMGVMVCIVALGILVDRVLFRLLELRVRRRWG
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
LLEAA
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA