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The map label for this gene is yiaN [C]

Identifier: 220919204

GI number: 220919204

Start: 4609907

End: 4611796

Strand: Direct

Name: yiaN [C]

Synonym: A2cp1_4124

Alternate gene names: 220919204

Gene position: 4609907-4611796 (Clockwise)

Preceding gene: 220919201

Following gene: 220919206

Centisome position: 91.66

GC content: 72.54

Gene sequence:

>1890_bases
ATGCCCCTCCGTGAGGGGTCAATCGACTTTCGCGTGACCGCCCCAACCATCTCCAGCCACGGCGATCCGGAAGCGCAGGG
CACGCGCATCGAGCGCGGCCTCGTCACGTTCCTGCTCGTGACGATGATCCTGCTGCCGGCCGCCTCCACCGTGTCGCGGC
GCCTCCTCGGCCGGGAGCTGCCCGGCTCGGCCGTGCTCGCGCAGCACATCACCCTCTGGGTGGGCTTCCTCGGAGCGATG
CTCGCCACCGCGAGCGGACGCCACCTCGCCCTGTCCACGCTCGACGTCATCCCGGTCGGCTGGCCCCGCACCGCGGCCTG
GTTCCTCGGCCAGGCCGTCTCCGCCGCGGTGACCGCGCTGCTCGCCTGGGCGTCGCTCGAGCTGGTCAAGGTGGAGTGGA
CCGGCTTCGGCCAGGTCGCGTTCGGCATCAAGGTGGCCTGGAGCCAGCTGGTGATGCCGGTGGGCTTCGCGATCATGGCG
CTGCGCTTCGCGTGGCGTGCCGGCGCGCCGTGCGAGTCCCTCCGCTGCTGGGGGCTGCGCGTCGCCGCCGCGCTGATCGC
CGCGGGCGCCTTCCTGCTCGGCTCGGCCGTGCCCGGCCCCGCGCTCACCTGGATCCTGTCGATCCTGGTGCTGCTCGCGT
TCCTGCTGGGCGCGCCGGTGTTCGTGGCCATGGCAGGCCTCGCCATGGTCCTGTTCTTCCGCGACGCGGGCGATCCGATC
GCCGTCGTCGCGGTCCCCACCGCCACGTTCAACCTGGTCTCGTCGGCCACGCTGCCCGCCATCCCGCTGCTCACCGCGGC
CGGCTACGTGCTCGCCGAGGGCGGCGCGGCGCGCCGGCTGGTGCGCGCGTACAAGGGGATCTTCGGGTGGATGCCGGGCG
GCGTCGCGGTGATGGCGACGTTCGTCTGCGCGCTGTTCACCACCTTCACCGGCGCGTCCGGCGTCACCATCCTCGCGCTG
GGCGGCCTGCTGCTCCCGGCGCTGCTCGAGGACGGCTACCCGGAGGACTTCTCGGTCGGCCTGGTCACGGCGGCCGGCTC
GCTGGGCCTGCTGTTCCCGCCCTCGCTGCCGGTGATCCTCTACGGCGTGGTGGCGCAGGCGCCCATCGACCACCTGTTCA
TCGGCGGCCTGGTGCCGGGCCTGCTCATGATCGTCCTCGTGGCCGCGTACGGCGTCCTCGTGGGCGTCCGCTCCCGCGCG
CCGCGGCAGGCGTTCCACCCGCGCGAGGCGCTCGCCGCGCTGTGGGACGCGAAGTGGGACCTCGGGCTCCCGACGCTCGT
CGTCGTGGCGGTGGGGTCCGGGTTCGCCACGGTGGTGGAGGCCGCCGCGCTCGCCGCCGCCTACGCGCTGGTGGTGGAGC
TGCTGGTGTTCCGCTCGATCGGCCCGGTCCGCGACCTGCCGCGGGTGCTGGTCCACGCGTCCACGCTGGTCGGGAGCGTG
GTGATCCTGCTCGGCACCGCGCTCGGCCTCACCTCCTGGTTCGTGGACGCGGAGATCCCCACCCGGCTGGTGGAGTGGAT
GACGGCGCACGTGCACTCGCCGGCGCTCTTCCTGCTCATGCTGAACGCGGTGCTGCTGGTGCTCGGCAGCGTGCTCGAGA
TCTACTCGGCCATCGTGGTGCTGGCGCCGCTGGTCGCGCCGCTCGGCGTCGCGTACGGCATCGAGCCCATCCACCTCGGC
GTGGTGTTCCTCGCGAACCTCGAGCTCGGGTTCCTGTTCCCGCCCATGGGGCTCAACCTGTTCCTGTCGGCCTCGCGGTT
CAACAAGCCGCTGCCGTACCTGTACCGGAAGGCGTTCCCGTTCCTGCTCATCATGAGCGCGGGCGTCCTCGCCATCACCT
ACCTGCCGGCCATCACCACCGGCGTGGTGGAGCTGCTGGCGCGGGACTAG

Upstream 100 bases:

>100_bases
AGCGGCGGCAGCGTGACCGCCAGTATGAGGGCGACGTGTGTACGGTTCACGCGGGATGGCCCGTCCGCGGAGGGATCGTG
ATAAGCGTGGGTACTCATAG

Downstream 100 bases:

>100_bases
CGCGCCGGCGCGCGGGCCGGCCAGCCCTCGCGCAGCGCGAACACCGCCAGCGTCACGGCGTACGCGCCGGCCACGTCGAT
GGTGTAGTGCAGGTGCGCGA

Product: TRAP dicarboxylate transporter subunit DctM

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 629; Mature: 628

Protein sequence:

>629_residues
MPLREGSIDFRVTAPTISSHGDPEAQGTRIERGLVTFLLVTMILLPAASTVSRRLLGRELPGSAVLAQHITLWVGFLGAM
LATASGRHLALSTLDVIPVGWPRTAAWFLGQAVSAAVTALLAWASLELVKVEWTGFGQVAFGIKVAWSQLVMPVGFAIMA
LRFAWRAGAPCESLRCWGLRVAAALIAAGAFLLGSAVPGPALTWILSILVLLAFLLGAPVFVAMAGLAMVLFFRDAGDPI
AVVAVPTATFNLVSSATLPAIPLLTAAGYVLAEGGAARRLVRAYKGIFGWMPGGVAVMATFVCALFTTFTGASGVTILAL
GGLLLPALLEDGYPEDFSVGLVTAAGSLGLLFPPSLPVILYGVVAQAPIDHLFIGGLVPGLLMIVLVAAYGVLVGVRSRA
PRQAFHPREALAALWDAKWDLGLPTLVVVAVGSGFATVVEAAALAAAYALVVELLVFRSIGPVRDLPRVLVHASTLVGSV
VILLGTALGLTSWFVDAEIPTRLVEWMTAHVHSPALFLLMLNAVLLVLGSVLEIYSAIVVLAPLVAPLGVAYGIEPIHLG
VVFLANLELGFLFPPMGLNLFLSASRFNKPLPYLYRKAFPFLLIMSAGVLAITYLPAITTGVVELLARD

Sequences:

>Translated_629_residues
MPLREGSIDFRVTAPTISSHGDPEAQGTRIERGLVTFLLVTMILLPAASTVSRRLLGRELPGSAVLAQHITLWVGFLGAM
LATASGRHLALSTLDVIPVGWPRTAAWFLGQAVSAAVTALLAWASLELVKVEWTGFGQVAFGIKVAWSQLVMPVGFAIMA
LRFAWRAGAPCESLRCWGLRVAAALIAAGAFLLGSAVPGPALTWILSILVLLAFLLGAPVFVAMAGLAMVLFFRDAGDPI
AVVAVPTATFNLVSSATLPAIPLLTAAGYVLAEGGAARRLVRAYKGIFGWMPGGVAVMATFVCALFTTFTGASGVTILAL
GGLLLPALLEDGYPEDFSVGLVTAAGSLGLLFPPSLPVILYGVVAQAPIDHLFIGGLVPGLLMIVLVAAYGVLVGVRSRA
PRQAFHPREALAALWDAKWDLGLPTLVVVAVGSGFATVVEAAALAAAYALVVELLVFRSIGPVRDLPRVLVHASTLVGSV
VILLGTALGLTSWFVDAEIPTRLVEWMTAHVHSPALFLLMLNAVLLVLGSVLEIYSAIVVLAPLVAPLGVAYGIEPIHLG
VVFLANLELGFLFPPMGLNLFLSASRFNKPLPYLYRKAFPFLLIMSAGVLAITYLPAITTGVVELLARD
>Mature_628_residues
PLREGSIDFRVTAPTISSHGDPEAQGTRIERGLVTFLLVTMILLPAASTVSRRLLGRELPGSAVLAQHITLWVGFLGAML
ATASGRHLALSTLDVIPVGWPRTAAWFLGQAVSAAVTALLAWASLELVKVEWTGFGQVAFGIKVAWSQLVMPVGFAIMAL
RFAWRAGAPCESLRCWGLRVAAALIAAGAFLLGSAVPGPALTWILSILVLLAFLLGAPVFVAMAGLAMVLFFRDAGDPIA
VVAVPTATFNLVSSATLPAIPLLTAAGYVLAEGGAARRLVRAYKGIFGWMPGGVAVMATFVCALFTTFTGASGVTILALG
GLLLPALLEDGYPEDFSVGLVTAAGSLGLLFPPSLPVILYGVVAQAPIDHLFIGGLVPGLLMIVLVAAYGVLVGVRSRAP
RQAFHPREALAALWDAKWDLGLPTLVVVAVGSGFATVVEAAALAAAYALVVELLVFRSIGPVRDLPRVLVHASTLVGSVV
ILLGTALGLTSWFVDAEIPTRLVEWMTAHVHSPALFLLMLNAVLLVLGSVLEIYSAIVVLAPLVAPLGVAYGIEPIHLGV
VFLANLELGFLFPPMGLNLFLSASRFNKPLPYLYRKAFPFLLIMSAGVLAITYLPAITTGVVELLARD

Specific function: Unknown

COG id: COG1593

COG function: function code G; TRAP-type C4-dicarboxylate transport system, large permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TRAP transporter large permease family [H]

Homologues:

Organism=Escherichia coli, GI48994950, Length=355, Percent_Identity=28.7323943661972, Blast_Score=126, Evalue=4e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010656
- InterPro:   IPR004681 [H]

Pfam domain/function: PF06808 DctM [H]

EC number: NA

Molecular weight: Translated: 65898; Mature: 65767

Theoretical pI: Translated: 8.45; Mature: 8.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLREGSIDFRVTAPTISSHGDPEAQGTRIERGLVTFLLVTMILLPAASTVSRRLLGREL
CCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCC
PGSAVLAQHITLWVGFLGAMLATASGRHLALSTLDVIPVGWPRTAAWFLGQAVSAAVTAL
CCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHH
LAWASLELVKVEWTGFGQVAFGIKVAWSQLVMPVGFAIMALRFAWRAGAPCESLRCWGLR
HHHHHEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
VAAALIAAGAFLLGSAVPGPALTWILSILVLLAFLLGAPVFVAMAGLAMVLFFRDAGDPI
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCE
AVVAVPTATFNLVSSATLPAIPLLTAAGYVLAEGGAARRLVRAYKGIFGWMPGGVAVMAT
EEEEECCHHHHHHHCCCCCHHHHHHHCCHHEECCHHHHHHHHHHHHHHHCCCCHHHHHHH
FVCALFTTFTGASGVTILALGGLLLPALLEDGYPEDFSVGLVTAAGSLGLLFPPSLPVIL
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCHHHHH
YGVVAQAPIDHLFIGGLVPGLLMIVLVAAYGVLVGVRSRAPRQAFHPREALAALWDAKWD
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHCCCCC
LGLPTLVVVAVGSGFATVVEAAALAAAYALVVELLVFRSIGPVRDLPRVLVHASTLVGSV
CCCHHEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
VILLGTALGLTSWFVDAEIPTRLVEWMTAHVHSPALFLLMLNAVLLVLGSVLEIYSAIVV
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAPLVAPLGVAYGIEPIHLGVVFLANLELGFLFPPMGLNLFLSASRFNKPLPYLYRKAFP
HHHHHHHHHHHHCCCHHHHHHHHHCCCCCCEECCCCCCHHEEEHHHCCCCCHHHHHHHHH
FLLIMSAGVLAITYLPAITTGVVELLARD
HHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PLREGSIDFRVTAPTISSHGDPEAQGTRIERGLVTFLLVTMILLPAASTVSRRLLGREL
CCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCC
PGSAVLAQHITLWVGFLGAMLATASGRHLALSTLDVIPVGWPRTAAWFLGQAVSAAVTAL
CCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHH
LAWASLELVKVEWTGFGQVAFGIKVAWSQLVMPVGFAIMALRFAWRAGAPCESLRCWGLR
HHHHHEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
VAAALIAAGAFLLGSAVPGPALTWILSILVLLAFLLGAPVFVAMAGLAMVLFFRDAGDPI
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCE
AVVAVPTATFNLVSSATLPAIPLLTAAGYVLAEGGAARRLVRAYKGIFGWMPGGVAVMAT
EEEEECCHHHHHHHCCCCCHHHHHHHCCHHEECCHHHHHHHHHHHHHHHCCCCHHHHHHH
FVCALFTTFTGASGVTILALGGLLLPALLEDGYPEDFSVGLVTAAGSLGLLFPPSLPVIL
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCHHHHH
YGVVAQAPIDHLFIGGLVPGLLMIVLVAAYGVLVGVRSRAPRQAFHPREALAALWDAKWD
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHCCCCC
LGLPTLVVVAVGSGFATVVEAAALAAAYALVVELLVFRSIGPVRDLPRVLVHASTLVGSV
CCCHHEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
VILLGTALGLTSWFVDAEIPTRLVEWMTAHVHSPALFLLMLNAVLLVLGSVLEIYSAIVV
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAPLVAPLGVAYGIEPIHLGVVFLANLELGFLFPPMGLNLFLSASRFNKPLPYLYRKAFP
HHHHHHHHHHHHCCCHHHHHHHHHCCCCCCEECCCCCCHHEEEHHHCCCCCHHHHHHHHH
FLLIMSAGVLAITYLPAITTGVVELLARD
HHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]