| Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011891 |
| Length | 5,029,329 |
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The map label for this gene is 220918965
Identifier: 220918965
GI number: 220918965
Start: 4316334
End: 4317218
Strand: Direct
Name: 220918965
Synonym: A2cp1_3880
Alternate gene names: NA
Gene position: 4316334-4317218 (Clockwise)
Preceding gene: 220918964
Following gene: 220918966
Centisome position: 85.82
GC content: 82.37
Gene sequence:
>885_bases GTGATCGTCGCGCTTTTCCTCACCTCGCTCGTCCTCGGCGTCCCCGCGCCGTCGGCGCCGTCCGCGCCGGACCCGGTGCA GGCGGCGGGCGCCGCAGGCGTCCCCGCCGCGCTGGCCCGCGACGTGGCGAGCCGGGCGGGGGCGCGCGGCGTCGCGCCGG AGCGGGCGCTCGCGCCGGTGGTCGCGGCTGCCCGCGCCGGCCTGCCGGGCGAGGTGGTCGCGGCGAAGATCCTCGAGGGC CTGGCCAAGGGCGCCCCGCCGGAGCGCGTGCTCGAGGTCGCCGCGGAGCTGGGCGGCCGCCTCTCGCGCGCGGCGGCGCT GGTGGCGCAGGCGCGCGCCTCCGGGCTGCCGCTCCGCGGCGACCGGACCGCGGCGCTCGCCGACCTGGCCGGCGCGCTCG GCGCGGGCGTGCCGCCGGACGCGGTGCTCCAGCTCGTCGACGCGGCGCGGGGCGCGTCCGGCGGGAGCTGCGAGGCGGTG GTGGCGGCGGCCCGCACGCTCGGTGAGCTGGCACGGCGCGGCGTGCCGGTCCGGGAGACGCTGCCGCTCGGCGCGGCGCT CGCGCAGCGCGCGCCAGCGTCCGCCGGCGAGGTGGCGGCGCTCTACGACGCGTACCGGGCCGAGGGCGGCCGGGACGCGG CGGCGTTCCTGGTCGAGGCCGAGCGCCGCGTCCAGGCCGGCGCGGCGCTGCAGGGCATGGTGGACACGTTCGGCGAGTCG CCCGACCACCTGGTGCGCGCGCGGAGCCGCGCCGCCGACGCCGCCGCCGGCGGCCTGGACAAGGCCTCCGAGCACGTCCG CAGCGCGCGCGAGGGCGTCGGCCCCGGGTCGCCGCCCGGCCTGGAGCGCGTTCCACCCGGCCGCGGGCCGAAGAAGCCCA AGTAG
Upstream 100 bases:
>100_bases CTTCGGGGGCGAGAACGCGGTCCTCCGTGTCCCGTAACCGCGTGCTCCCACGCTCGTCGGGTCGGGTGGTGCGGACGTCG GCAGAACGGAGACACCGTCG
Downstream 100 bases:
>100_bases GACCGCCGCCCACCGGTGCGTCGCCTTGTGGTCCCCCGAGGGGGCGGGCTAACATCCCGCCGTGGTCGAGGCCGCCCCTT CCATCCCGACGGACTTCAAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 294; Mature: 294
Protein sequence:
>294_residues MIVALFLTSLVLGVPAPSAPSAPDPVQAAGAAGVPAALARDVASRAGARGVAPERALAPVVAAARAGLPGEVVAAKILEG LAKGAPPERVLEVAAELGGRLSRAAALVAQARASGLPLRGDRTAALADLAGALGAGVPPDAVLQLVDAARGASGGSCEAV VAAARTLGELARRGVPVRETLPLGAALAQRAPASAGEVAALYDAYRAEGGRDAAAFLVEAERRVQAGAALQGMVDTFGES PDHLVRARSRAADAAAGGLDKASEHVRSAREGVGPGSPPGLERVPPGRGPKKPK
Sequences:
>Translated_294_residues MIVALFLTSLVLGVPAPSAPSAPDPVQAAGAAGVPAALARDVASRAGARGVAPERALAPVVAAARAGLPGEVVAAKILEG LAKGAPPERVLEVAAELGGRLSRAAALVAQARASGLPLRGDRTAALADLAGALGAGVPPDAVLQLVDAARGASGGSCEAV VAAARTLGELARRGVPVRETLPLGAALAQRAPASAGEVAALYDAYRAEGGRDAAAFLVEAERRVQAGAALQGMVDTFGES PDHLVRARSRAADAAAGGLDKASEHVRSAREGVGPGSPPGLERVPPGRGPKKPK >Mature_294_residues MIVALFLTSLVLGVPAPSAPSAPDPVQAAGAAGVPAALARDVASRAGARGVAPERALAPVVAAARAGLPGEVVAAKILEG LAKGAPPERVLEVAAELGGRLSRAAALVAQARASGLPLRGDRTAALADLAGALGAGVPPDAVLQLVDAARGASGGSCEAV VAAARTLGELARRGVPVRETLPLGAALAQRAPASAGEVAALYDAYRAEGGRDAAAFLVEAERRVQAGAALQGMVDTFGES PDHLVRARSRAADAAAGGLDKASEHVRSAREGVGPGSPPGLERVPPGRGPKKPK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28917; Mature: 28917
Theoretical pI: Translated: 10.35; Mature: 10.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIVALFLTSLVLGVPAPSAPSAPDPVQAAGAAGVPAALARDVASRAGARGVAPERALAPV CHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHH VAAARAGLPGEVVAAKILEGLAKGAPPERVLEVAAELGGRLSRAAALVAQARASGLPLRG HHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC DRTAALADLAGALGAGVPPDAVLQLVDAARGASGGSCEAVVAAARTLGELARRGVPVRET CHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHH LPLGAALAQRAPASAGEVAALYDAYRAEGGRDAAAFLVEAERRVQAGAALQGMVDTFGES CCHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PDHLVRARSRAADAAAGGLDKASEHVRSAREGVGPGSPPGLERVPPGRGPKKPK HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MIVALFLTSLVLGVPAPSAPSAPDPVQAAGAAGVPAALARDVASRAGARGVAPERALAPV CHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHH VAAARAGLPGEVVAAKILEGLAKGAPPERVLEVAAELGGRLSRAAALVAQARASGLPLRG HHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC DRTAALADLAGALGAGVPPDAVLQLVDAARGASGGSCEAVVAAARTLGELARRGVPVRET CHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHH LPLGAALAQRAPASAGEVAALYDAYRAEGGRDAAAFLVEAERRVQAGAALQGMVDTFGES CCHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PDHLVRARSRAADAAAGGLDKASEHVRSAREGVGPGSPPGLERVPPGRGPKKPK HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA