| Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011891 |
| Length | 5,029,329 |
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The map label for this gene is 220918825
Identifier: 220918825
GI number: 220918825
Start: 4155303
End: 4155962
Strand: Direct
Name: 220918825
Synonym: A2cp1_3737
Alternate gene names: NA
Gene position: 4155303-4155962 (Clockwise)
Preceding gene: 220918824
Following gene: 220918826
Centisome position: 82.62
GC content: 78.79
Gene sequence:
>660_bases GTGCGCCTGCCCGAGGCGGCGCCGATCCGCGAGCGCCCCATGAGCGCCGCGGAGGCCCACACGATCCGGCTCTCGCTGCC CTGGATCGAGCGCGGTGAGAAGCCCGACCCGGCGCGCCTGAAGGCCGAGATCGAGGAGGCGCTCGCCCACGATCCCGGGC ACGTGGCGGCGCTCGAGCGGATGGCCGAGGACCGTGCCGGCGACGCGCTCTCCCTCGCCGAGCGCGCCACGGCCGCCCAC CCCGAGGACGCGCGTGCCTGGCGGTTCCTCGCGCGCAGCACCAGCGACGGCGAGCGGCGCATCGCCGCGCTCCGCAAGGC GGTGGAGACGGATGGGGCGAGCGCCGAGGCGGCGAACGAGCTCGCCTGGACGCTGCTCGAGGCGGGCCGCTCCGGTGAGG CGCTGCCGCTCGCGCGCCGAGCGGTCGCGACGGAGCCGTGGAATGCGGGGATCATCGACACGCTCGCCGGCGTGCTCGAG GACCTGGGGCAGTGCCCCGAGGCGCTCGCGCTGCAGCGCCGCGCCGTCGACGTGCTGCCGGAAGGCGTCAGCCCCGCCGC GCGGGCCGCGCTCGTCGAGCGGAGGTCGCGCTTGGAGGCCGCCTGCGGCCGGCCGCAGCCCGCGACGGCGCCGGCGCCGG CTCCCGCCGCGGCGCCCTGA
Upstream 100 bases:
>100_bases CGTGGCGGTCCGGCGTGGCGCGAGCTCCGCACGCAATTCGCCGAGCTGCAGGGCCGCTTCCTCCGCGGACAGGCGCGCCG GGAAGTACAGCTACCGCGGC
Downstream 100 bases:
>100_bases CGCGGCGGAGCGCGGCCCCACGCCGCTGCGCGCGCCGGCGCAACTCCGTCCGGAGAGCCTCGCGCCGCGGAACCCGAAAT CCGCCGCCCCTCCCCGGCTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 219; Mature: 219
Protein sequence:
>219_residues MRLPEAAPIRERPMSAAEAHTIRLSLPWIERGEKPDPARLKAEIEEALAHDPGHVAALERMAEDRAGDALSLAERATAAH PEDARAWRFLARSTSDGERRIAALRKAVETDGASAEAANELAWTLLEAGRSGEALPLARRAVATEPWNAGIIDTLAGVLE DLGQCPEALALQRRAVDVLPEGVSPAARAALVERRSRLEAACGRPQPATAPAPAPAAAP
Sequences:
>Translated_219_residues MRLPEAAPIRERPMSAAEAHTIRLSLPWIERGEKPDPARLKAEIEEALAHDPGHVAALERMAEDRAGDALSLAERATAAH PEDARAWRFLARSTSDGERRIAALRKAVETDGASAEAANELAWTLLEAGRSGEALPLARRAVATEPWNAGIIDTLAGVLE DLGQCPEALALQRRAVDVLPEGVSPAARAALVERRSRLEAACGRPQPATAPAPAPAAAP >Mature_219_residues MRLPEAAPIRERPMSAAEAHTIRLSLPWIERGEKPDPARLKAEIEEALAHDPGHVAALERMAEDRAGDALSLAERATAAH PEDARAWRFLARSTSDGERRIAALRKAVETDGASAEAANELAWTLLEAGRSGEALPLARRAVATEPWNAGIIDTLAGVLE DLGQCPEALALQRRAVDVLPEGVSPAARAALVERRSRLEAACGRPQPATAPAPAPAAAP
Specific function: Unknown
COG id: COG0457
COG function: function code R; FOG: TPR repeat
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23216; Mature: 23216
Theoretical pI: Translated: 5.21; Mature: 5.21
Prosite motif: PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLPEAAPIRERPMSAAEAHTIRLSLPWIERGEKPDPARLKAEIEEALAHDPGHVAALER CCCCCCCCHHHCCCCHHHHEEEEEECCHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHH MAEDRAGDALSLAERATAAHPEDARAWRFLARSTSDGERRIAALRKAVETDGASAEAANE HHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHH LAWTLLEAGRSGEALPLARRAVATEPWNAGIIDTLAGVLEDLGQCPEALALQRRAVDVLP HHHHHHHCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCC EGVSPAARAALVERRSRLEAACGRPQPATAPAPAPAAAP CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MRLPEAAPIRERPMSAAEAHTIRLSLPWIERGEKPDPARLKAEIEEALAHDPGHVAALER CCCCCCCCHHHCCCCHHHHEEEEEECCHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHH MAEDRAGDALSLAERATAAHPEDARAWRFLARSTSDGERRIAALRKAVETDGASAEAANE HHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHH LAWTLLEAGRSGEALPLARRAVATEPWNAGIIDTLAGVLEDLGQCPEALALQRRAVDVLP HHHHHHHCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCC EGVSPAARAALVERRSRLEAACGRPQPATAPAPAPAAAP CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA