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The map label for this gene is ldcA [C]

Identifier: 220918634

GI number: 220918634

Start: 3959578

End: 3960543

Strand: Reverse

Name: ldcA [C]

Synonym: A2cp1_3542

Alternate gene names: 220918634

Gene position: 3960543-3959578 (Counterclockwise)

Preceding gene: 220918640

Following gene: 220918633

Centisome position: 78.75

GC content: 79.92

Gene sequence:

>966_bases
GTGCGCCTCCCCCCGCTGCTGCGCCGCGGCGACCCCGTCCGCGTCATCGCGCCGTCGAGCCCCTTCGAGCCGGAGCTGCT
CGCCCGCGGCGTGGCCGTCCTCCGCGACCGGCTCGGGCTCGAGCCGCGCATGCGCGCCGACCTGGGGGCGCGGGCGCGCT
ACCTCGCCGGCGACGACGCCCGGCGGCTGGAGGAGTGGCGCGAGGCGGTCGCGGACCCGGACGCACGGGCGATCTTCTGC
GCGCGCGGCGGGTTCGGGGCGAGCCGGCTGCTCCCCGAGGTGGACCCGGCGCCCCTGCTCGAGCGGCCCAAGGTGCTGGT
GGGCTTCTCCGACGTGTGCGCGCTGCACGCCGCGCTCAACCGCGCCGGCCTCGCCACCGTCCACGGCCCGGTGCTGACGC
AGCTCGGCCGGGCGCCGGAGGCCGCGGTCGCGCAGCTCGAGGCCCTGCTGCTGGGAGGCGCGCCGCGCCCGGATCCGTGG
GCGCCGCCCGCGGCGGGGGCCGGGCTGCCCGGGACGGCCACGGTGAGGGCGGGCCGCGCGGCGGGGCCGCTGCTCGGCGG
CTCGCTGACCCTGCTGGCGCACCTGTGCGGCACGCCGTTCGCGCCGCGGCTGGACGGCGCGCTGCTCCTGCTCGAGGACG
TGGGGGAGAAGCCGTACCGCCTCGATCGCTACCTGACGCAGCTCCGGCTGGCCGGCGCGCTGGACGGGGTGGCGGGGGTG
GCGCTGGGTCATTTCACGGAATGTGACGCCGCGGGGGTGCGCGGCGCCGACGTGGTCCGGGAGCGGGTCGCGGGCCTCGG
GGTGCCGGTGGCGGAGGGCTTCCCGGTGGGACACGAGGACGCGAACTTCTCGGTCCCGCTCGGCGCCCGGGCGACGCTGG
TCGCGCCCGGGCCCGGCGAGGAGGGCGCGCCGCGGCTGCTGTTCGACGGCTGGTGGGCCCGCGAAGGCGAGGGCGCCGCC
CGGTGA

Upstream 100 bases:

>100_bases
TGCACGGACGGTGACACGGGGGCCGCAGCCGGCGAGCGCCTCCCGCCTTGGCGGGGACGCCGCCTCGACCCCCACCGGCC
GCGCGGTTATCCTCCGCGCC

Downstream 100 bases:

>100_bases
GCGCCGCGCTCCCGCCGGTCGCGGCCGTGCTGGACGCGGGCGCGCGCGAGCGCGTCGCCCCGGCGCTCTCTGCGGCGGTG
CTCCGCGACGGGCGGCTGGT

Product: peptidase U61 LD-carboxypeptidase A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 321; Mature: 321

Protein sequence:

>321_residues
MRLPPLLRRGDPVRVIAPSSPFEPELLARGVAVLRDRLGLEPRMRADLGARARYLAGDDARRLEEWREAVADPDARAIFC
ARGGFGASRLLPEVDPAPLLERPKVLVGFSDVCALHAALNRAGLATVHGPVLTQLGRAPEAAVAQLEALLLGGAPRPDPW
APPAAGAGLPGTATVRAGRAAGPLLGGSLTLLAHLCGTPFAPRLDGALLLLEDVGEKPYRLDRYLTQLRLAGALDGVAGV
ALGHFTECDAAGVRGADVVRERVAGLGVPVAEGFPVGHEDANFSVPLGARATLVAPGPGEEGAPRLLFDGWWAREGEGAA
R

Sequences:

>Translated_321_residues
MRLPPLLRRGDPVRVIAPSSPFEPELLARGVAVLRDRLGLEPRMRADLGARARYLAGDDARRLEEWREAVADPDARAIFC
ARGGFGASRLLPEVDPAPLLERPKVLVGFSDVCALHAALNRAGLATVHGPVLTQLGRAPEAAVAQLEALLLGGAPRPDPW
APPAAGAGLPGTATVRAGRAAGPLLGGSLTLLAHLCGTPFAPRLDGALLLLEDVGEKPYRLDRYLTQLRLAGALDGVAGV
ALGHFTECDAAGVRGADVVRERVAGLGVPVAEGFPVGHEDANFSVPLGARATLVAPGPGEEGAPRLLFDGWWAREGEGAA
R
>Mature_321_residues
MRLPPLLRRGDPVRVIAPSSPFEPELLARGVAVLRDRLGLEPRMRADLGARARYLAGDDARRLEEWREAVADPDARAIFC
ARGGFGASRLLPEVDPAPLLERPKVLVGFSDVCALHAALNRAGLATVHGPVLTQLGRAPEAAVAQLEALLLGGAPRPDPW
APPAAGAGLPGTATVRAGRAAGPLLGGSLTLLAHLCGTPFAPRLDGALLLLEDVGEKPYRLDRYLTQLRLAGALDGVAGV
ALGHFTECDAAGVRGADVVRERVAGLGVPVAEGFPVGHEDANFSVPLGARATLVAPGPGEEGAPRLLFDGWWAREGEGAA
R

Specific function: L,D-carboxypeptidase [C]

COG id: COG1619

COG function: function code V; Uncharacterized proteins, homologs of microcin C7 resistance protein MccF

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S66 family [H]

Homologues:

Organism=Escherichia coli, GI1787441, Length=300, Percent_Identity=31, Blast_Score=105, Evalue=3e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003507 [H]

Pfam domain/function: PF02016 Peptidase_S66 [H]

EC number: NA

Molecular weight: Translated: 33431; Mature: 33431

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLPPLLRRGDPVRVIAPSSPFEPELLARGVAVLRDRLGLEPRMRADLGARARYLAGDDA
CCCCCCHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCHHHHCCCCCHHHHCCCHH
RRLEEWREAVADPDARAIFCARGGFGASRLLPEVDPAPLLERPKVLVGFSDVCALHAALN
HHHHHHHHHHCCCCCCEEEEECCCCCHHHCCCCCCCCCHHHCCEEEECHHHHHHHHHHHH
RAGLATVHGPVLTQLGRAPEAAVAQLEALLLGGAPRPDPWAPPAAGAGLPGTATVRAGRA
HCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEECCCC
AGPLLGGSLTLLAHLCGTPFAPRLDGALLLLEDVGEKPYRLDRYLTQLRLAGALDGVAGV
CCCCCCHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHH
ALGHFTECDAAGVRGADVVRERVAGLGVPVAEGFPVGHEDANFSVPLGARATLVAPGPGE
HHHCCCCCCCCCCCHHHHHHHHHHHCCCCHHCCCCCCCCCCCEEECCCCCEEEECCCCCC
EGAPRLLFDGWWAREGEGAAR
CCCCEEEECCCCCCCCCCCCC
>Mature Secondary Structure
MRLPPLLRRGDPVRVIAPSSPFEPELLARGVAVLRDRLGLEPRMRADLGARARYLAGDDA
CCCCCCHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCHHHHCCCCCHHHHCCCHH
RRLEEWREAVADPDARAIFCARGGFGASRLLPEVDPAPLLERPKVLVGFSDVCALHAALN
HHHHHHHHHHCCCCCCEEEEECCCCCHHHCCCCCCCCCHHHCCEEEECHHHHHHHHHHHH
RAGLATVHGPVLTQLGRAPEAAVAQLEALLLGGAPRPDPWAPPAAGAGLPGTATVRAGRA
HCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEECCCC
AGPLLGGSLTLLAHLCGTPFAPRLDGALLLLEDVGEKPYRLDRYLTQLRLAGALDGVAGV
CCCCCCHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHH
ALGHFTECDAAGVRGADVVRERVAGLGVPVAEGFPVGHEDANFSVPLGARATLVAPGPGE
HHHCCCCCCCCCCCHHHHHHHHHHHCCCCHHCCCCCCCCCCCEEECCCCCEEEECCCCCC
EGAPRLLFDGWWAREGEGAAR
CCCCEEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]